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Whole-Genome Identification, Phylogeny, And Evolution Of The Cytochrome P450 Family 2 (Cyp2) Subfamilies In Birds, Daniela Almeida, Emanuel Maldonado, Imran Khan, Liliana Silva, M. Thomas P. Gilbert, Guojie Zhang, Erich D. Jarvis, Stephen J. O'Brien, Warren E. Johnson, Agostinho Antunes

Biology Faculty Articles

The cytochrome P450 (CYP) superfamily defends organisms from endogenous and noxious environmental compounds, and thus is crucial for survival. However, beyond mammals the molecular evolution of CYP2 subfamilies is poorly understood. Here, we characterized the CYP2 family across 48 avian whole genomes representing all major extant bird clades. Overall,12 CYP2 subfamilies were identified, including the first description of the CYP2F, CYP2G, and several CYP2AF genes in avian genomes. Some of the CYP2 genes previously described as being lineage-specific, such as CYP2K and CYP2W, are ubiquitous to all avian groups. Furthermore, we identified a large number of CYP2J copies, which have …

Acoustic Evidence Of Bats Using Rock Crevices In Winter: A Call For More Research On Winter Roosts In North America, Cliff A. Lemen, Patricia W. Freeman, Jeremy A. White

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

The Northern Long-eared Myotis (Myotis septentrionalis) is known to hibernate in mines and caves, often using cracks within these hibernacula as roost sites. We hypothesized that M. septentrionalis might use deep cracks in rock outcrops for hibernation as well. To test this hypothesis, we placed acoustical bat detectors near rock outcrops away from any known mines or caves during winter in Nebraska. We documented calls of M. septentrionalis as well as Perimyotis subflavus and Eptesicus fuscus in December near rock outcrops, which suggests that individuals of all three species were hibernating in rock crevices in winter. Of the …

Influence Of Porcine Plasma Supplementation On Gestating Sow Serum Igf-1 Concentration And Litter Weights, Mathew Vaughn, Crystal Serrano, Derris Burnett, Duane Davis, Jason Woodworth, John Gonzalez

Professional Agricultural Workers Journal

The objective of this pilot study was to determine the effect of dietary porcine plasma on circulating insulin-like growth factor 1 (IGF-1) concentrations in gestating sows and characteristics of their litters. Primiparous and multiparous sows were randomly allocated to two treatment groups of sows fed a basal diet or sows fed the basal diet plus 6 g of porcine plasma throughout gestation. On 4 periods during gestation and farrowing, blood was collected for IGF-1 analysis. After farrowing, gestation length, number born, birth weight, and total litter weight were recorded. There were no three-way or two-way interactions between treatments, day of …

Grazing With Goats Changed The Woodland Plant-Species Composition During Summer, Rishi Khatri, Uma Karki, Jerry Bettis, Yubaraj Karki

Professional Agricultural Workers Journal

Abstract

Woodland grazing is a common practice in the Southeast; however, information is limited on its effects on the woodland plant-species composition. The study objective was to determine the effect of summer grazing on woodland plant-species composition. Before- and after-grazing observations were taken at the ground, mid, and high levels in three plots (1-acre each) along the pre-established transects. Kiko wethers (29, 6-8 months old, 26.8±0.67 kg body weight) were allowed to graze the plots after before-grazing observations were taken. After-grazing observations were taken immediately after the goats were moved out from the plots. Grazing showed a significant effect on …

Review: Interspecies Ethics By Cynthia Willett, Thomas E. Randall

Between the Species

This paper provides a review of Cynthia Willett's book Interspecies Ethics. Willett aims to outline the beginnings of biosocial eros ethics – an ethical outline that sketches the potentiality of a cross-species cosmopolitan ideal of compassion (agape), derived through acknowledging and emphasizing the existence of spontaneous, playful interaction between social animals. Though this book is recommended for offering an innovative framework from which to explore the possibility of non-anthropocentric cross-species ethic, readers should be wary of expecting to find a fully-fledged moral program detailing how this would work.

Sex And Seasonal Differences In Diet And Nutrient Intake In Verreaux's Sifakas (Propithecus Verreauxi), Flávia Koch, Joerg U. Ganzhorn, Jessica M. Rothman, Colin A. Chapman, Claudia Fichtel

Publications and Research

Fluctuations in food availability are a major challenge faced by primates living in seasonal climates. Variation in food availability can be especially challenging for females, because of the high energetic costs of reproduction. Therefore, females must adapt the particular demands of the different reproductive stages to the seasonal availability of resources. Madagascar has a highly seasonal climate, where food availability can be extremely variable. We investigated the seasonal changes in diet composition, nutrient and energy intake of female and male sifakas (Propithecus verreauxi) in a dry deciduous forest in western Madagascar. We examined how females adjust their diet to different …

Ecosystem Based Fisheries Management Afs/Ocg 560x, Michael Cerbo

Library Impact Statements

No abstract provided.

A New Species Of Centruroides (Scorpiones: Buthidae) From Quiché, Northwestern Guatemala, Rony E. Trujillo, Luis F. De Armas

Euscorpius

A new species of the genus Centruroides Marx, 1890 is described from Sotzil Village (15.61775°N, -91.09745°W, 1173 m a.s.l.), Chajul Municipality, Quiché Department, Guatemala, on basis of one female and one male. It closely resembles Centruroides caral Armas et Trujillo, 2013 from northeastern Guatemala (240 Km southeast of Chajul), but male differs by having a most globose pedipalp manus, as well as metasoma clearly more attenuate (len-gth/width ratio: segments II–IV = 2.4, 2.7 and 1.4, respectively; 1.7, 2.2 and 2.5 in the holotype of C. caral, the only known specimen of this taxon). Data on its habitat and some …

Using Citizen Science And Remote Sensing Data To Model Hummingbird Migration, Sarah R. Supp, Laura J. Graham, Frank A. La Sorte, Tina A. Cormier, Gil Bohrer, Donald Powers, Susan Wethington, Kevin Guay, Patrick Jantz, Scott Goetz, Catherine H. Graham

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.

Changes In Sublethal Effects And Lead Accumulation In Acanthopagrus Latus Under Various Lead Concentrations And Salinities, Wen-Ching Tsui, Jiann-Chu Chen, Sha-Yen Cheng

Journal of Marine Science and Technology–Taiwan

This study investigated the sublethal concentration of lead and calcium levels in yellowfin seabream juvenile (Acanthopagrus latus) (4.367 ± 0.470 cm; 1.408± 0.478 g) following exposure to a series of lead concentrations at various salinities (0‰, 9‰, 17‰, 25‰ and 34‰). Yellowfin seabream juveniles exposed to 17‰ salinity were the most tolerant to lead. After 96-h, the 50% lethal concentration (LC50) values were 0.33, 1.43, 3.78, 2.32 and 1.46 mg Pb2+ /L following exposure to 0‰, 9‰, 17‰, 25‰ and 34‰ salinities, respectively. The 6-, 12-, 24-, 48- and 96-h LC50 for fish exposed to 17‰ salinity were 124.67, 33.02, …

A Lota Lota Consumption: Trophic Dynamics Of Non-Native Burbot In A Valuable Sport Fishery, Stephen L. Klobucar, W. Carl Saunders, Phaedra Budy

Watershed Sciences Student Research

Unintentional and illegal introductions of species disrupt food webs and threaten the success of managed sport fisheries. Although many populations of Burbot Lota lota are declining in the species’ native range, a nonnative population recently expanded into Flaming Gorge Reservoir (FGR), Wyoming–Utah, and threatens to disrupt predator–prey interactions within this popular sport fishery. To determine potential impacts on sport fishes, especially trophy Lake Trout Salvelinus namaycush, we assessed the relative abundance of Burbot and quantified the potential trophic or food web impacts of this population by using diet, stable isotope, and bioenergetic analyses. We did not detect a significant …

Judgement Bias In Goats (Capra Hircus): Investigating The Effects Of Human Grooming, Luigi Baciadonna, Christian Nawroth, Alan G. Mcelligott

Emotion Collection

Animal emotional states can be investigated by evaluating their impact on cognitive processes. In this study, we used a judgement bias paradigm to determine if shortterm positive human-animal interaction (grooming) induced a positive affective state in goats. We tested two groups of goats and trained them to discriminate between a rewarded and a non-rewarded location over nine training days. During training, the experimental group (nD9) was gently groomed by brushing their heads and backs for five min over 11 days (nine training days, plus two testing days, total time 55 min). During training, the control group (nD10) did not experience …

Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Ix. Lanzatus, Orthochirus, And Somalicharmus (Buthidae), With Description Of Lanzatus Somalilandus Sp. N. And Orthochirus Afar Sp. N., František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

The rare Horn of Africa buthid genera Lanzatus Kovařík, 2001, Orthochirus Karsch, 1891, and Somalicharmus Kovařík, 1998 were newly collected. Lanzatus is reported for the first time from Somaliland, and Orthochirus for the first time from Ethiopia. We describe two new species, Lanzatus somalilandus sp. n. from Somaliland, and Orthochirus afar sp. n. from Ethiopia, both discovered during scorpiological expeditions in 2011–2016. Information is provided for all Horn of Africa species belonging to these three genera: their taxonomy, distribution, and ecology, fully complemented with color photos of live and preserved specimens, as well as their habitat. …

Consciousness And The Unity Of Mind, Mark Rowlands

Animal Sentience

Several types of objection have been raised against the arguments I presented in my target article, “Are animals persons?” Among the objections are the following: (1) the claim that animals are persons is of little significance, (2) my use of the Lockean conception of the person is questionable, (3) whether a creature qualifies as a person is a matter of social construction rather than objective fact, (4) reflective consciousness is more important than I realize, (5) my reliance on implicit self-awareness in the account of personhood is ill-advised, (6) my account entails that too many creatures qualify as persons, and …

The North American Sea Ducks: Their Biology And Behavior, Paul A. Johnsgard

Zea E-Books Collection

The 21 species of sea ducks are one of the larger subgroups (Tribe Mergini) of the waterfowl family Anatidae, and the 16 species (one historically extinct) that are native to North America represent the largest number to be found on any continent, and also the largest number of endemic sea duck species native to any continent.

Although generally not important as game birds, the sea ducks include some economically important birds such as the eiders, the basis for the Arctic eiderdown industry and a historically important food source for some Native American cultures. They also include what is probably the …

Identification Of Snps Located On Bta 6 And Bta 20 Significantly Associated With Bovine Respiratory Disease In Crossbred Cattle, S. L. Miller, S. Mizell, R. Walker, T. Page, Matthew D. Garcia

Animal, Dairy, and Veterinary Science Faculty Publications

The objective of the present study was to evaluate single nucleotide polymorphisms (SNPs) located in two quantitative trait locus (QTL) regions (BTA 6 and BTA 20) that are associated with bovine respiratory disease (BRD). A population of 323 crossbred steers sired by five purebred sire breeds during 2010-2013 (Angus, Braford, Braunvieh, Charolais, and Simmental) were evaluated for BRD susceptibility during the finishing process at a commercial feedlot. A total of 21 animals representing all sire breeds were affected with BRD at some time during the finishing process over the 4-year period. Although multiple sire breeds were evaluated in the present …

Insects: Still Looking Like Zombies, Christopher S. Hill

Animal Sentience

In arguing that insect brains are capable of sentience, Klein & Barron rely heavily on Bjorn Merker’s claim that activity in the human mid-brain is sufficient for conscious experience. I criticize Merker’s claim by pointing out that the behaviors supported by midbrain activity are much more primitive than the ones that appear to depend on consciousness. I raise a similar objection to Klein & Barron’s contention that insect behaviors are similar to behaviors that manifest consciousness in human beings. The similarity is weak. I also respond to the related view that integrative activity in mid-brain structures is sufficient to explain …

Intensive, Regular Sampling And Removal Of Modest Numbers Of Fishes Shows No Measurable Impact On Fish Populations In Three Streams Of North Georgia, Steven L. Powers

Southeastern Fishes Council Proceedings

Recent publications and restrictions on collecting by state fish and game managers indicate a growing concern regarding the impact of field sampling on native fish populations. To evaluate the validity of these concerns, data from five life-history studies conducted in Cherokee County, Georgia were examined to test the hypothesis that regular sampling has a negative impact on fish populations. Number of individuals collected was divided by time collecting to calculate catch per unit effort (CPUE) as an indicator of relative abundance for each species. The collecting sequence (i.e. the number of times a species had previously been sampled) was regressed …

A Study Of Defensive Mechanisms Employed By Two Species Of Nudibranchs Using Toxicity And Unpalatability Analyses, Sean Youn

Independent Study Project (ISP) Collection

Nudibranchs are marine invertebrates that have developed an intriguing defense mechanism, including warning coloration and the use of chemicals accumulated through their sponge diet. The goal of this study was to determine whether the strength of chemical defenses differs between dietary and accumulated secondary metabolites for two species: Glossodoris vespa and Ceratosoma brevicaudatum. First, NMR spectroscopy was used to not only identify specific compounds in the mantle (outer covering) and the viscera (gut) but also to analyze the possibility of nudibranch species transporting more toxic compounds for defensive purposes. Next, toxicity (brine shrimp) and palatability (Palaemon shrimp) assays were used …

Measurement Of Fisheries Compliance Outcomes : A Preliminary National Study : Frdc Final Report, E Price, Roy Melville-Smith, D King, Timothy J. Green, W Dixon, S Lambert, T Spencer

Fisheries Research Reports

This report presents the results of a project undertaken by a group of Australia and United States based fishery compliance experts to assess and compare methods for measuring fisheries compliance outcomes that can be used to assess and compare the effectiveness of fishery enforcement and compliance assistance activities. This eight month project was requested in 2013 by Australia’s National Fisheries Compliance Committee (NFCC) as a way to provide fisheries compliance groups with improved methods for measuring and tracking the effectiveness of their activities and for justifying and managing their budgets.

Reef Fish And Coral Assemblages On Hospital Point And Near Bastimentos Island, Panama, Elaine Shen

Independent Study Project (ISP) Collection

Because worldwide declines coral reef health are of major concern, studying coral reefs through the lens of conservation efforts at local scales is essential for determining and monitoring effective policy measures. In the Bocas del Toro Archipelago, there are conflicts of interest between exploitative rapid tourism development, overfishing practices, and national efforts to conserve the local marine biodiversity. Coral and reef fish species abundance richness, diversity, evenness, and similarity were measured to see how coral and reef fish assemblages changed between protected and unprotected areas. A total of 329 fish and 322.5 square meters of benthos were analyzed using underwater …

The Effects Of Sulfuric Acid Deposition On The Growth And Development Of Pond Breeding Salamanders In The Genus Ambystoma, Kenneth J. Anderson

Masters Theses & Specialist Projects

In terrestrial habitats with a history of mining activity and previous or ongoing reclamation efforts, understanding the effects of acidification on the ecology of amphibians is an important part of the restoration process and the conservation of local amphibian populations. Pond-breeding amphibians spend much of their post metamorphic life history in direct contact with the soil in upland habitat adjacent to aquatic breeding sites. I reared recently metamorphosed marbled salamanders (Ambystoma opacum) to evaluate the role of soil acidity on determinants of fitness such as growth and survival. My results indicate that a substrate of pH 4 was lethal to …

Uncommon/Rare Avian Species Decline And Extirpation In Nested Assemblages Of Northeastern Illinois Wetlands, James M. Mcaley

All Capstone Projects

Baisa found that avian assemblages are highly nested in palustrine emergent wetlands in northeastern Illinois. He measured nestedness by constructing a binary matrix of species presence and absence across sites. Nestedness was also quantified using the Mann-Whitney U-test in his study.

The goal of this project was to sample the wetlands as Baisa had done in his study. By doing so, we will have 2 sampling events, approximately 10 years apart. Nestedness of the wetland communities will be checked, and data compared to that of Baisa. Emergent wetlands in northeastern Illinois were found by Baisa to contain highly nested avian …

Northern Saw-Whet Owls: Influence Of Environmental Factors On Autumn Migration Dynamics, Hannah K. Murphy

Senior Honors Theses

A portion of the population of the Northern Saw-whet Owl (Aegolius acadicus) leaves its breeding range in Canada and the northern United States each fall to winter where lesser snow cover allows easier access to prey. Study of its migratory dynamics is difficult, however, both because of its nocturnal habits and because it does not vocalize readily off of its breeding territory. Since 2002 banding studies in the Lynchburg area have investigated the migration dynamics of this species in central Virginia. However, few studies have examined the influence of environmental factors on capture rates of saw-whets during migration. …

Cedar Waxwings, Michael L. Avery, Anthony G. Duffiney

Wildlife Damage Management Technical Series

Prevention and control of cedar waxwing (Bombycilla cedrorum) damage to small fruits such as blueberry, cherry, and strawberry is vexing to growers in many parts of the United States. Cedar waxwings (Figure 1) travel in flocks and descend in large numbers on berry crops, especially during winter and migration. In short feeding bouts, waxwings eat, peck, or knock substantial amounts of fruit from the plants. These frugivores are difficult to discourage once they become established at a given location. Harassment early and often using pyrotechnics or other sudden noisemakers can help prevent flocks from being established. The most effective preventative …

Foraging Behavior Of Tetramorium Caespitum In An Urban Environment: The Effect Of Food Quality On Foraging, Nicole A. Crofton, Sabrina R. D'Mello, Nene S. Sy

Student Publications

Animals' foraging strategies are directly related to their fitness. Proposed models of optimal foraging assume that animals strategize in terms of maximizing benefits over the cost of acquiring resources. Ants are social insects that are comparable in biomass to humans inhabiting the plant. As such, it is crucial to understand the foraging strategies of such an influential member of the ecosystem. With the ever-increasing rate of urbanization and human encroachment, it is even more important to consider the foraging patterns of species inhabiting urban areas. In this study we investigate optimal foraging strategies in the pavement ant, Tetramorium caespitum. Specifically, …

News Of The Department Of Animal Science, Department Of Animal Science

Animal Science Newsletters

No abstract provided.

Rabbit Control: Bait Stations, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

This factsheet provides information on using bait stations for rabbit control.

Biological control agents such as the myxoma virus (myxomatosis), and rabbit haemorraghic disease virus (RHDV) or rabbit calicivirus disease, will not provide ‘magic bullets’ for reducing the impact of rabbits on agricultural production and the environment. Biological agents are more effective when they form part of an integrated approach to rabbit control. An integrated approach should use all available control options, including biological control, the use of vertebrate pesticides, shooting, and trapping programs. Control programs are most effective when they include the greatest number of properties possible (that is, …

The Effects Of Sub-Lethal Predation On The Reproductive Output Of Acanthaster Planci (Crown-Of-Thorns Starfish), Emily Mucha

Independent Study Project (ISP) Collection

Wide-scale declines in live coral cover have been observed throughout history. Modern day coral populations face a multitude of environmental disturbances, however one of the most devastating to the reefs in the Indo-Pacific is the crown-of-thorns starfish (Acanthaster planci), which feeds on the tissues of live corals. The rate at which these individuals feed combined with the explosion of populations in times of outbreak have been seen to exert some of the biggest pressures on coral reefs to date. Following recent episodes of crown-of-thorns starfish (COTS) outbreaks, research on the organism has become increasingly prevalent on the scientific …

Fish Diversity And Coral Health Of Tanzania's Reefs: A Comparative Study Between The Ushongo Village Reef And The Fungu Zinga Reef Over Time, Della Turque, Corinne Casper

Independent Study Project (ISP) Collection

The world’s oceans are becoming increasing acidic due to global climate change, posing a threat to marine ecosystems, including coral carbonate systems. Environmental threats are exacerbated by human development stressors as well: growing populations, dependency on marine resources, and unsustainable practices invaluable marine ecosystems at risk. Tanzania’s coral reef system extends for 3580 km2 (Muhando et al. 2008) near the Tanga region, serving over half a million people who are highly dependent on fishing and other marine resources as their livelihoods (Samoilys et. al. 2008). With Tanzania’s population rapidly growing, the unsustainable pressure on coral reefs for sustenance and livelihood …