Digital Commons Network^™

Transmission Of Antibiotic Resistance At The Wildlife-Livestock Interface, Shinyoung Lee, Peixin Fan, Ting Liu, Anni Yang, Raoul K. Boughton, Kim M. Pepin, Ryan S. Miller, Kwangcheol Casey Jeong

United States Department of Agriculture Wildlife Services: Staff Publications

Antibiotic-resistant microorganisms (ARMs) are widespread in natural environments, animals (wildlife and livestock), and humans, which has reduced our capacity to control life threatening infectious disease. Yet, little is known about their transmission pathways, especially at the wildlife-livestock interface. This study investigated the potential transmission of ARMs and antibiotic resistance genes (ARGs) between cattle and wildlife by comparing gut microbiota and ARG profiles of feral swine (Sus scrofa), coyotes (Canis latrans), cattle (Bos taurus), and environmental microbiota. Unexpectedly, wild animals harbored more abundant ARMs and ARGs compared to grazing cattle. Gut microbiota of cattle was …

Dammed Water Quality—Longitudinal Stream Responses Below Beaver Ponds In The Umpqua River Basin, Oregon, John R. Stevenson, Jason B. Dunham, Steven M. Wondzell, Jimmy Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

Beaver-related restoration (BRR) has gained popularity as a means of improving stream ecosystems, but the effects are not fully understood. Studies of dissolved oxygen (DO) and water temperature, key water quality metrics for salmonids, have demonstrated improved conditions in some cases, but warming and decreased DO have been more commonly reported in meta-analyses. These results point to the contingencies that can influence outcomes from BRR. We examined water quality related to beaver ponds in a diverse coastal watershed (Umpqua River Basin, OR, USA). We monitored water temperature 0–400m above and below beaver ponds and at pond surfaces and bottoms across …

Economic Damages Of Wild Pigs In Non-Traditional Areas: From The Fairway To The After Life, Sophie Mckee, Julie Elser, Maryfrances Miller, Lirong Liu, Ryan Miller, Steven S. Shwiff, Stephanie A. Shwiff

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive wild pigs are widely known to cause damage to agricultural properties and commodities, but less has been reported about damages to other types of property. A survey was distributed to golf courses and cemeteries across Texas to explore the extent of damage these properties experience. While both property types reported significant damages, golf courses were found to experience more damage than cemeteries. Using average reported costs and predicted county-level damage, total costs for all golf courses and cemeteries across the state were estimated to exceed $1.6 million USD per year.

Sars-Cov-2 In Wildlife: Q & A With Alan B. Franklin, Alan B. Franklin

United States Department of Agriculture Wildlife Services: Staff Publications

Welcome Dr Franklin and thank you for joining us to help social workers increase their knowledge about the interconnectedness of humans, other mammals, and the environment. Let's begin with zoonosis.

Viruses can be transferred from wild and domestic animals to humans in a process called zoonosis.

Strength In Numbers: Avian Influenza A Virus Transmission To Poultry From A Flocking Passerine, J. Jeffrey Root, Jeremy W. Ellis, Susan A. Shriner

United States Department of Agriculture Wildlife Services: Staff Publications

The effects of flock size of European starlings (Sturnus vulgaris) was experimentally manipulated to assess the potential of influenza A virus (IAV; H4N6) transmission from a flocking passerine to bobwhite quail (Colinus virginianus) through shared food and water resources to mimic starling intrusions into free-range and backyard poultry operations. Of the three starling flock sizes tested (n = 30, n = 20 and n = 10), all successfully transmitted the virus to all or most of the quail in each animal room (6/6, 6/6 and 5/6) by the end of the experimental period, as determined by seroconversion and/or viral RNAshedding. …

Social Learning Of Avoidance Behaviors: Trap Aversion In Captive Coyotes, Julie Young, Jeffrey T. Schultz, Buck Jolley, Nekol Basili, John P. Draper

United States Department of Agriculture Wildlife Services: Staff Publications

Social learning can help animals gain knowledge rapidly and may enhance survival. In species that are subjected to capture in foothold traps and then lethally removed, such as the coyote (Canis latrans), learning to avoid traps is critical to survival. Here, we tested social learning of trap avoidance behavior in three experimental scenarios with captive coyotes. In the first experiment, coyotes observed an unfamiliar coyote get captured in a foothold trap (i.e., demonstrator) or did not observe a demonstrator and were therefore naïve to traps. The coyotes that observed a demonstrator showed similar latencies to approach the trap …

Predicting Consistent Foraging Ecologies Of Migrating Waterbirds: Using Stable Isotope And Parasite Measurements As Indicators Of Landscape Use, Kate L. Sheehan, Brian S. Dorr, Stephen A. Clements, Terrel W. Christie, Katie Hanson-Dorr, Scott A. Rush, J. Brian Davis

United States Department of Agriculture Wildlife Services: Staff Publications

The emergence of novel human pathogens is frequently linked with zoonotic events and human-wildlife interactions that promote disease transmission. Consequently, surveillance of wildlife populations for candidate diseases that could spread to humans is beneficial, but requires widespread collections of numerous samples. A legitimate means to acquire large sample sizes of waterfowl is through cooperation between researchers and hunters, who also work in concert with natural resource managers, landowners, and agricultural entities -e.g., aquaculture facilities. In addition to understanding the occurrence and spread of parasites and pathogens by birds, these samples can be used to answer questions about the ecology of …

Integrating Data Types To Estimate Spatial Patterns Of Avian Migration Across The Western Hemisphere, Timothy D. Meehan, Sarah P. Saunders, William V. Deluca, Nicole L. Michel, Joanna Grand, Jill L. Deppe, Miguel F. Jimenez, Erika J. Knight, Nathaniel E. Seavy, Melanie A. Smith, Lotem Taylor, Chad Witko, Michael E. Akresh, David R. Barber, Erin M. Bayne, James C. Beasley, Jerrold L. Belant, Richard O. Bierregaard, Keith L. Bildstein, Than J. Boves, John N. Brzorad, Steven P. Campbell, Antonio Celis-Murillo, Hilary A. Cooke, Robert Domenech, Laurie Goodrich, Elizabeth A. Gow, Aaron Haines, Michael T. Hallworth, Jason M. Hill, Amanda E. Holland, Scott Jennings, Roland Kays, Tommy King, Stuart A. Mackenzie, Peter P. Marra, Rebecca A. Mccabe, Kent P. Mcfarland, Michael J. Mcgrady, Ron Melcer, D. Ryan Norris, Russell E. Norvell, Olin E. Rhodes, Christopher C. Rimmer, Amy L. Scarpignato, Adam Shreading, Jesse L. Watson, Chad R. Wilsey

United States Department of Agriculture Wildlife Services: Staff Publications

For many avian species, spatial migration patterns remain largely undescribed, especially across hemispheric extents. Recent advancements in tracking technologies and high-resolution species distribution models (i.e., eBird Status and Trends products) provide new insights into migratory bird movements and offer a promising opportunity for integrating independent data sources to describe avian migration. Here, we present a three-stage modeling framework for estimating spatial patterns of avian migration. First, we integrate tracking and band re-encounter data to quantify migratory connectivity, defined as the relative proportions of individuals migrating between breeding and nonbreeding regions. Next, we use estimated connectivity proportions along with eBird occurrence …

Summer Habitat Use And Movements Of Invasive Wild Pigs (Sus Scrofa) In Canadian Agro-Ecosystems, Corey J. Kramer, Melanie R. Boudreau, Ryan S. Miller, Ryan Powers, Kurt C. Vercauteren, Ryan K. Brook

United States Department of Agriculture Wildlife Services: Staff Publications

Resource selection informs understanding of a species’ ecology and is especially pertinent for invasive species. Since introduced to Canada, wild pigs (Sus scrofa Linnaeus, 1978) remain understudied despite recognized negative impacts on native and agricultural systems globally. Elsewhere in North America, pigs typically use forests and forage in agricultural crops. We hypothesized Canadian wild pigs would behave similarly, and using GPS locations from 15 individuals, we examined diel and seasonal resource selection and movement in the Canadian prairie region. Forests were predominately selected during the day, while corn (Zea mays L.), oilseeds, and wheat (Triticum aestivum L.) …

Ontario’S Double-Crested Cormorant Hunting Season May Be Ineffective But That Doesn’T Mean There Are No Conflict Issues, Brian S. Dorr, David G. Fielder, James R. Jackson, James F. Farquhar, Douglas W. Schultz, Randall M. Claramunt

United States Department of Agriculture Wildlife Services: Staff Publications

No abstract provided.

Managing Roof Rats In Citrus Orchards: Initial Efforts Toward Building An Integrated Pest Management Program, Roger A. Baldwin, Justine A. Smith, Ryan Meinerz, Aaron B. Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Roof rats cause extensive damage in orchards throughout the world. Integrated Pest Management (IPM) systems are the best option for managing rodents, yet few management systems have been developed and tested to control roof rats in agricultural settings. We initiated a study in 2020 to provide the foundation for an IPM program to manage roof rats in California citrus orchards. Our initial efforts centered on developing effective monitoring strategies for roof rats to determine when management actions are needed, assessing rat movement patterns to determine proper placement of management tools, and conducting initial tests of Goodnature A24 self-resetting traps and …

Development Of A Novel Vertebrate Pesticide For The Invasive Small Indian Mongoose, Carmen Antaky, Steven C. Hess, Israel Leinbach, Robert T. T. Sugihara, Emily W. Ruell, Shane Siers

United States Department of Agriculture Wildlife Services: Staff Publications

Small Indian mongooses are detrimental introduced predators in the United States, where they depredate native species, serve as vector of disease, and threaten public safety. Due to the risk of accidental introduction to mongoose-free islands, high cost and limitations to trapping, and no national (Section 3) Environmental Protection Agency (EPA)-registered toxicants for mongoose control, there is a need for an efficacious toxic bait for mongooses for use in conservation areas and at points of entry in the United States. Over the last five years, the National Wildlife Research Center (NWRC) worked to develop a toxic bait for mongooses for registration …

Abert’S Squirrel Management In Support Of Endangered Mount Graham Red Squirrel Recovery In Arizona, Aaron R. Morehead, Christopher Carillo, Holly Hicks, Wade Sanders, David L. Bergman

United States Department of Agriculture Wildlife Services: Staff Publications

Recovery of the endangered Mount Graham red squirrel (MGRS) will likely be long and challenging. Its limited habitat, isolation to Pinaleño Mountain range, and demographic characteristics restrict its ability to rebound quickly from threats that impact both the squirrel and its habitat. Currently, threats to the MGRS include habitat degradation and loss through high-severity wildfire, fire suppression activities, insect outbreaks, climate change, and human development, and predation, as well as competition with Abert’s squirrels. The most recent wildfire in 2017 impacted over 48,000 acres of already reduced habitat. A critical first step is to protect and manage the remaining population …

Migratory Movements And Home Ranges Of Geographically Distinct Wintering Populations Of A Soaring Bird, Ryo Ogawa, J. Brian Davis, D. Tommy King, L. Wes Burger, Bronson K. Strickland, Marsha A. Sovada, Guiming Wang, Fred L. Cunningham

United States Department of Agriculture Wildlife Services: Staff Publications

Migratory soaring birds exhibit spatiotemporal variation in their circannual movements. Nevertheless, it remains uncertain how different winter environments affect the circannual movement patterns of migratory soaring birds. Here, we investigated annual movement strategies of American white pelicans Pelecanus erythrorhynchos (hereafter, pelican) from two geographically distinct wintering grounds in the Southern and Northern Gulf of Mexico (GOM).We hypothesized that hourly movement distance and home range size of a soaring bird would differ between different geographic regions because of different thermals and wind conditions and resource availability. We calculated average and maximum hourly movement distances and seasonal home ranges of GPS-tracking pelicans. …

Invasive Rodent Responses To Experimental And Natural Hurricanes With Implications For Global Climate Change, Aaron B. Shiels, Gabriela E. Ramírez De Arellano, Laura Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Hurricanes cause dramatic changes to forests by opening the canopy and depositing debris onto the forest floor. How invasive rodent populations respond to hurricanes is not well understood, but shifts in rodent abundance and foraging may result from scarce fruit and seed resources that follow hurricanes. We conducted studies in a wet tropical forest in Puerto Rico to better understand how experimental (canopy trimming experiment) and natural (Hurricane Maria) hurricane effects alter populations of invasive rodents (Rattus rattus [rats] and Mus musculus [mice]) and their foraging behaviors. To monitor rodent populations, we used tracking tunnels (inked and baited cards …

Improving Efficiency Of Prairie Dog Surveys By Using A Small Copter Drone, Aaron B. Shiels, J. W. Fischer, Danika Spock, Meagan Allira

United States Department of Agriculture Wildlife Services: Staff Publications

Prairie dogs are an accessible and enjoyed wildlife species in Colorado that require occasional surveys because populations can change abruptly due to plague outbreaks or human-induced control. We evaluated the use of small copter drones at four prairie dog colonies on Open Space and Mountain Parks lands, City of Boulder, to determine if this methodology improves efficiency over ground-based survey methods. We counted prairie dogs and burrows using two types of drones (DJI Matric 210 and Autel Evo II) at altitudes 100', 150', and 400' (burrows only). We recorded video and merged still images into orthomosaics prior to having USDA …

Susceptibility Of Wild Canids To Sars-Cov-2, Stephanie M. Porter, Aim E. Hartwig, Helle Bielefeldt-Ohmann, Angela M. Bosco-Lauth, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

We assessed 2 wild canid species, red foxes (Vulpes vulpes) and coyotes (Canis latrans), for susceptibility to SARS-CoV-2. After experimental inoculation, red foxes became infected and shed infectious virus. Conversely, experimentally challenged coyotes did not become infected; therefore, coyotes are unlikely to be competent hosts for SARS-CoV-2.

Throughout the COVID-19 pandemic, multiple instances of natural infections with SARS-CoV-2 have been reported in pet dogs, likely after exposure to an infected human (1–3). Domestic dogs appear to be minimally susceptible to SARS-CoV-2, as indicated by experimental inoculations resulting in reverse transcription PCR–positive samples and low titer antibody responses but no clinical …

Exploring The Value Of A Global Gene Drive Project Registry, Riley I. Taitingfong, Antoinette J. Piaggio, Cinnamon S. Bloss, Et Al.

United States Department of Agriculture Wildlife Services: Staff Publications

Recent calls to establish a global project registry before releasing any gene-drive-modified organisms (GDOs) have suggested a registry could be valuable to coordinate research, collect data to monitor and evaluate potential ecological impacts, and facilitate transparent communication with community stakeholders and the general public. Here, we report the results of a multidisciplinary expert workshop on GDO registries convened on 8–9 December 2020 involving 70 participants from 14 countries. Participants had expertise in gene drive design, conservation and population modeling, social science, stakeholder engagement, governance and regulation, international policy, and vector control; they represented 45 organizations, spanning national and local governmental …

Predicting Spatial-Temporal Patterns Of Diet Quality And Large Herbivore Performance Using Satellite Time Series, Sean P. Kearney, Lauren M. Porensky, David J. Augustine, Justin D. Derner, Feng Gao

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Adaptive management of large herbivores requires an understanding of how spatial-temporal fluctuations in forage biomass and quality influence animal performance. Advances in remote sensing have yielded information about the spatial-temporal dynamics of forage biomass, which in turn have informed rangeland management decisions such as stocking rate and paddock selection for free-ranging cattle. However, less is known about the spatial-temporal patterns of diet quality and their influence on large herbivore performance. This is due to infrequent concurrent ground observations of forage conditions with performance (e.g., mass gain), and previously limited satellite data at fine spatial and temporal scales. We combined multi-temporal …

The Question Is Not “Can Humans Talk?” Or “Can They Suffer?” But “Can They Reason?”, Clive Phillips

Animal Sentience

In their target article, Rowan et al (2022) make a welcome attempt to chart the development of Western progress over the past two hundred years toward formally recognizing that animals feel. They outline the heroic efforts of Compassion in World Farming to gain for animals the status of sentient beings rather than merely human property. A broader view exists, from human prehistory to the present day, in which animals have been (and still are) understood to be sentient by indigenous peoples as well as by some Eastern religions. Growing recognition in the West that animals feel represents a new age …

Succession Of Carrion Insects On Pig Carcasses Relocated From Indoor To Outdoor Conditions, Sudarat Fueangmeekun

Chulalongkorn University Theses and Dissertations (Chula ETD)

Forensic entomological evidence can be used to solve relocations cases. However, forensic entomological studies on corpse relocation in Thailand is limited, therefore, this research aimed to study insect succession on pig carcasses relocated from indoor to outdoor conditions and pig carcasses refrigerated for 3 days before relocated to the outdoor condition. Nong Hin District in Loei Province was chosen to be the study site. The study was conducted in three seasons: winter, summer and monsoon. There were three experiments in each season: 1) non-relocation (control), 2) relocation from an indoor to an outdoor condition, and 3) refrigeration before relocation. There …

Over-Wintering Grounds Social Behavior Of White-Crowned Sparrows, Lauryn Jeans

CMC Senior Theses

White-Crowned Sparrows (WCSP), Zonotrichia leucophrys gambelii, are small, migrating passerine birds whose over-wintering ground social behavior is poorly researched. Suitable wintering grounds must balance climate preference and migration length, are affected by territory size and habitat competition, and have long-term effects on bird fitness. A study observed Golden-Crowned Sparrows (Zonotrichia atricapilla) returning every year to the same wintering ground and forming strong social communities during those winter months. We predicted that WCSPs exhibit wintering ground fixation and form stable flock structure at the Bernard Field Station (BFS) in Southern California during the winter months of October to …

Application Of Pork Checkoff We Care Sustainability Principles To Pork Production: Water, Nutrition, And Biosecurity, Hannah Miller

Electronic Theses and Dissertations

The Pork Checkoff program was founded in 1986 as a means to strengthen U.S. pork in the market place (Pork Checkoff). Under this program all U.S. pork producers and importers pay $0.40 for every $100 worth of pigs is sold (Pork Checkoff). Funds are then used for pork promotion, research, and education for producers and consumers (Pork Checkoff). The Pork Checkoff program uses the We Care ethical principles as a means to address “continuous improvement in the pork industry’s production practices and promote a strong record of responsible farming to those outside of the industry” (National Pork Board, 2018a). The …

High Protein Yeast-Based Ddgs As An Alternative To Commonly Used Protein Sources In Pig Diets, Yesid Ricardo Garavito Duarte

Electronic Theses and Dissertations

Alternative ingredients and co-products from ethanol and biofuel industries represent an opportunity for utilization in swine diets. In this context, understanding nutritional value to practical swine feeding begins with product characterization and determination of nutrient digestibility. The objective of this research was to test the hypothesis: yeast-based high-protein DDGS (HP-GDDY) has comparable AA and metabolizable energy (ME) digestibility to feedstuffs commonly used in swine diets and that it could be included as an alternative protein source in nursery diets without negative impact on growth performance. Cornstarch-based diets were formulated using six ingredients as the sole source of AA: spray dried …

Impacts Of Plastic Pollution On A Pelagic Marine Mammal, The Northern Elephant Seal, Lauren M. Kashiwabara

University of the Pacific Theses and Dissertations

As plastic pollution increases, top marine predators such as marine mammals are becoming increasingly susceptible to plastic particles and their additives. Plastic particles have been found in gastrointestinal tracts and scat of many marine mammals, and quantifying plastic pollution in those that are pelagic can provide insight into plastic pollution in mesopelagic ecosystems that are just beginning to be analyzed. Adapting well-developed laboratory techniques for microplastic (MP) isolation (i.e. density separation and chemical digestion), I isolated MPs from the scat of the deepest diving pinniped, the northern elephant seal (NES), and found that100% of scat samples (n=11) contained high counts …

Body Temperature And Reproductive Effort In A Long-Lived Tropical Songbird, Holly R. Jackson

Graduate Student Theses, Dissertations, & Professional Papers

Heat production relative to dissipation rates have constrained reproductive effort and reduced fitness in short-lived, temperate birds. To determine whether heat constrains reproductive effort in long-lived taxa with low reproductive effort, we experimentally clipped plumage from tropical Gray-throated babblers (Stachyris nigriceps) to increase heat dissipation rates. Contrary to findings in short-lived species, we found no strong evidence of heat dissipation constraints on reproductive effort in our mid-elevation study. Clipped adults did not increase feeding rates compared to controls, but clipped females did spend more time incubating and brooding eggs and young. Increased time in the nest may reduce increased heat …

Review Of Loon Lessons: Uncommon Encounters With The Great Northern Diver, By James D. Paruk, Kristin Bianchini

The Prairie Naturalist

Gavia immer Brunnich (Common Loon) is a bird that has captivated bird watchers, wildlife enthusiasts, campers, cottagers, and others interested in the natural world for centuries. The loon also features prominently in Native American mythology. For many, the loon symbolizes the wildness of the north, and it is often used as a sentinel of lake health. Indeed, the Common Loon has inspired a wealth of literature, both scientific and popular, describing this species’ ecology, behavior, and fitness in the face of environmental changes. To this literature, Loon Lessons: Uncommon Encounters with the Great Northern Diver adds a complete and accurate …

A Review Of The Alien Fishes Of Turkish Inland Waters, Erdoğan Çi̇çek, Soheil Eagderi, Sevi̇l Sungur

Turkish Journal of Zoology

Aquaculture, recreational fishing, restocking, biological control, and the ornamental fish trade have increased the number of nonnative fish in Turkish inland waters. This work reviews the history, current state, and tendencies of fish introductions into Turkish freshwaters. To date, it is known that a total of 34 exotic species (except two marine and three misidentified species) have been introduced deliberately or accidentally into Turkish inland waters, of which, only 19 species have been established in wild ecosystems. A total of five acclimatized species, viz. Coregonus lavaretus, C. macrophthalmus, Salmo salar, Salvelinus alpinus, and S. fontinalis and four species, viz. Hypophthalmichthys …

Length-Weight Relationships Of 28 Fish Species Caught From Demersal Trawl Survey In Themiddle Black Sea, Turkey, Murat Dağteki̇n, Yaşar Genç, Nazli Kasapoğlu, Gökhan Eri̇k, Devri̇m Seli̇m Misir, Sali̇h İlhan, Meltem Ok, Cemi̇l Altuntaş, Uğur Özsandikçi, Ferhat Büyükdeveci̇, Tuğba Kaya, Ayşe Cebeci̇, Asi̇ye Nur Saltan, Ati̇la Haşi̇moğlu, Şi̇ri̇n Fi̇ri̇di̇n

Turkish Journal of Zoology

This study provides updated the length-weight relationships and Fulton's condition factor of 28 fish species belonging to 23 families from the Black Sea. Samples were collected along the depths between 0-100 meters by demersal trawl surveys conducted seasonally from May 2017 to September 2019. A total of 83,885 specimens were collected. The length-weight relationships and Fulton's condition factor, minimum, maximum and mean lengths, total weights, descriptive statistics, and growth type were provided for all the species. The results indicate that LWR parameters of b varied from 2.2039 to 3.737 and Fulton's condition factor varied between 0.004 and 1.18. These findings …

Fish Biodiversity In Zhanjiang Mangroves National Nature Reserve, China, Juan Lei, Yongyan Liao, Wei Tang, Dong Xie, Teng Wang, Wen Xiong, Peter A. Bowler

Turkish Journal of Zoology

China's mangroves provide important habitat for many endangered fish species, but, there has been little research upon the diversity and the distribution of fish species within mangroves habitats. To compile an inventory of fish fauna in this field, a total of 14 ichthyological surveys were conducted in Zhanjiang Mangrove during different seasons between August 2016 and December 2019. A total of 208 fish species have identified belonging to 18 orders, 69 families and 142 genera from Zhanjiang Mangroves National Nature Reserve, the largest mangrove habitat in China. Of these 17 species are listed as threatened species in the IUCN Red …