Digital Commons Network^™

Review Of The Genus Polycheria Haswell, A Symbiotic Group Of Amphipods (Crustacea: Dexaminidae) With Descriptions Of New Species From Florida, The Caribbean Sea, And The Indo-Pacific Region, John Milton Foster

Dissertations

Systematics and taxonomy of the dexaminid amphipod genus Polycheria Haswell (Dexamindae: Amphipoda), whose members are cosmopolitan associates of tunicates and sponges, are confused. This is due in large part to the many inadequate and incomplete descriptions and poorly some executed illustrations, especially for the early studies on the group. Previously, 22 nominal species or forms have been described or designated in the literature. The purpose of this study is to critically review and clarify the systematics of this enigmatic genus. Based on personal collections and on specimens from museums, five new species are designated and 22 species or forms are …

Fisheries Research Report No. 178 - Aquaculture Feed Grains Program, Brett Glencross

Fisheries Research Reports

Incorporating:

GRDC Project UWA00062: Development of value-added plant protein products for the aquaculture feeds sector

and

FRDC Project 2004-236: Aquaculture Nutrition Subprogram - Evaluation of Value-added Grain Protein Products for Atlantic Salmon and Black Tiger Prawns

Objectives

1. Development of value-added lupin protein product(s) for use in the animal feeds sector.

2. Evaluation of the nutritional value of a range of value-added lupin protein products when fed to fish.

3. Commercial transfer of intellectual property for development of new-product(s).

4. To determine the nutritional value of selected grain products developed as part of the linked CLIMA-GRDC project, when included in …

Response Properties Of The Auditory Telencephalon In Songbirds Change With Recent Experience And Season, Thomas A. Terleph, Kai Lu, David S. Vicario

Biology Faculty Publications

The caudomedial nidopallium (NCM) is a telencephalic auditory area that is selectively activated by conspecific vocalizations in zebra finches and canaries. We recently demonstrated that temporal and spectral dynamics of auditory tuning in NCM differ between these species [1]. In order to determine whether these differences reflect recent experience, we exposed separate groups of each species and sex to different housing conditions. Adult birds were housed either in an aviary with conspecifics (NORM), with heterospecifics (canary subjects in a zebra finch aviary, and vice versa: (CROSS)), or in isolation (ISO) for 9 days prior to testing. We then recorded extracellular …

Genomic Profiling Reveals An Alternate Mechanism For Hepatic Tumor Promotion By Perfluorooctanoic Acid In Rainbow Trout, Susan C. Tilton, Gayle A. Orner, Abby D. Benninghoff, Hillary M. Carpenter, Jerry D. Hendricks, Cliff B. Pereira, David E. Williams

Animal, Dairy, and Veterinary Science Faculty Publications

Background

Perfluorooctanoic acid (PFOA) is a potent hepatocarcinogen and peroxisome proliferator (PP) in rodents. Humans are not susceptible to peroxisome proliferation and are considered refractory to carcinogenesis by PPs. Previous studies with rainbow trout indicate they are also insensitive to peroxisome proliferation by the PP dehydroepiandrosterone (DHEA), but are still susceptible to enhanced hepatocarcinogenesis after chronic exposure.

Objectives

In this study, we used trout as a unique in vivo tumor model to study the potential for PFOA carcinogenesis in the absence of peroxisome proliferation compared with the structurally diverse PPs clofibrate (CLOF) and DHEA. Mechanisms of carcinogenesis were identified from …

Endocrine And Follicular Dynamics During The Perideviation Period In Cattle, Morgan Krause

All Theses

Ovarian hyperstimulation used in conjunction with embryo transfer techniques is an assisted reproductive technology that aids cattle producers in reaching their reproductive, genetic, and financial goals; however, viable embryo recovery results are inconsistent, possibly because the reproductive endocrine profile is poorly understood. The objective of these experiments was to evaluate the endocrinological and ovarian dynamics surrounding follicular deviation in hyperstimulated cows.
In Experiment 1, the perideviation period (PDP; largest follicle diameter from 8 - 10- mm) was examined in Hyperstimulated (50 mg FSH) or Control (saline) dry Holstein cows (n = 4 / group). Daily blood samples began at the …

Mitochondrial Genomes Reveal An Explosive Radiation Of Extinct And Extant Bears Near The Miocene-Pliocene Boundary, Johannes Krause, Tina Unger, Aline Nocon, Anna-Sapfo Malaspinas, Sergios-Orestis Kolokotronis, Mathias Stiller, Leopoldo Soibelzon, Helen Spriggs, Paul H. Dear, Adrian W. Briggs, Sarah C. E. Bray, Stephen J. O'Brien, Gernot Rabeder, Paul Matheus, Alan Cooper, Montgomery Slatkin, Svante Paabo, Michael Hofreiter

Biology Faculty Articles

Background: Despite being one of the most studied families within the Carnivora, the phylogenetic relationships among the members of the bear family (Ursidae) have long remained unclear. Widely divergent topologies have been suggested based on various data sets and methods.

Results: We present a fully resolved phylogeny for ursids based on ten complete mitochondrial genome sequences from all eight living and two recently extinct bear species, the European cave bear (Ursus spelaeus) and the American giant short-faced bear (Arctodus simus). The mitogenomic data yield a well-resolved topology for ursids, with the sloth bear at the basal …

Arthropod And Plant Communities As Indicators Of Land Rehabilitation Effectiveness In A Semi-Arid Shrub-Steppe, Eric T. Gardner

Theses and Dissertations

We describe a case study evaluating the ecological impact of Bromus tectorum L. (cheatgrass) invasion following fire disturbance and the effectiveness of revegetation in improving ecological integrity in a degraded semi-arid shrub steppe system. The effectiveness of rehabilitation efforts was assessed from measurements of arthropod richness, vegetation and arthropod community composition, and ground cover characteristics in three habitats: undisturbed, burned and weed-infested (B. tectorum), and burned and rehabilitated with native and non-native vegetation. Arthropods were collected in each habitat using pitfall traps. Differences in arthropod richness were compared using rarefaction curves. Non-metric multidimensional scaling, and non-parametric multivariate statistical procedures including …

Evaluation Of Downy Mildew (Peronospora Farinosa F.Sp. Chenopodii) Resistance Among Quinoa Genotypes And Investigation Of P. Farinosa Growth Using Scanning Electron Microscopy, Leilani Kitz

Theses and Dissertations

Quinoa (Chenopodium quinoa Willd.) is a pseudocereal native to the Andean region of South America and a staple crop for subsistence farmers in the altiplano of Bolivia and Peru. Downy mildew is the most significant disease of quinoa caused by the pathogen Peronospora farinosa f.sp. chenopodii Byford. This disease greatly impacts quinoa crops with yield losses up to 99%. As fungicides are expensive for farmers, the development of resistant cultivars appears to be the most efficient means for controlling downy mildew. The quinoa germplasm bank contains high amounts of genetic diversity, some of which exhibit mildew resistance. Methods for evaluating …

Studies On Transformation Of Tomato(Solanum Lycopersicum L.) And Arabidopsis Thaliana Using Chimerical Constructs Of Varying Tospoviral Origin, Joshua Nathaniel Cobb

Theses and Dissertations

Pathogen derived resistance (PDR) is a recent breakthrough where plant hosts can be made to be resistant to viral infections through transformation with conserved viral genes. Given the severity of Tospovirus diseases worldwide (particularly in tomato), PDR has the potential to garner large yield returns where pathogen populations have overcome the established resistance. Tomato breeding lines FLA7804, FLA8044, and the research line MP1 were used in transformation experiments with potions of the Tomato spotted wilt virus (TSWV) N-gene, and two other chimerical viral nucleocapsid gene constructs from, Impatiens necrotic spot virus (INSV), and Groundnut ringspot virus (GRSV). We conducted 19 …

Comparative Cytotoxicity Of An Fda-Approved Cancer Drug To Extracts Of Atriplex Confertifolia On Human Breast And Cervical Cancer Cells, Christopher James Capua

Theses and Dissertations

The severity and number of people affected by cancer is a worldwide problem with millions of people affected annually. The search for treatment and cures of cancer continues to be a global effort. As part of this global effort, many natural products have been tested against cancer cell lines, most from plants located in tropical regions. However, this study reports that extracts of Atriplex confertifolia, a native North American plant, has significant bioactivity against human breast cancer cell lines MCF-7, 435, and 231, and HeLa cells (cervical cancer cells). The bioactivity of A. confertifolia extracts of these cells lines was …

Competitive Exclusion Of Cyanobacterial Species In The Great Salt Lake, Hillary Christine Roney

Theses and Dissertations

Under Gause's principle two species cannot indefinitely occupy the same niche. The north and south arms of Great Salt Lake are separated by a rail causeway, resulting in salinity differences and color variation between the arms. Farmington Bay is also separated from the south arm by a vehicular causeway to Antelope Island. These causeways allow examination of competitive exclusion of cyanobacteria in the hypersaline environment of the Great Salt Lake. Cyanobacterial distributions partially map salinity, with Aphanothece halophytica proliferating in the north arm, and Nodularia spumigena in the south arm. I hypothesized that cyanobacterial species abundant north of the railway …

Using A Chelator-Buffered Nutrient System To Study Phosphorus, Manganese And Zinc Interactions In Russet Burbank Potato, Steven A. Barben

Theses and Dissertations

Potato production requires high phosphorus (P) application with potential negative environmental or nutritional consequences for potato as well as for subsequent crops. Impacts of high available P on yield and plant nutrition of species in potato cropping rotations are inadequately understood, and could result in antagonistic interactions with cationic micronutrients such as zinc (Zn) and manganese (Mn). Three hydroponic experiments were conducted with Russet Burbank potato to elucidate P and Zn relationships and associated interactions with other nutrients. In the first experiment, P solution concentration was constant at 256 µM while Zn concentration varied: 0.1, 2, 6, 18, 54, 162 …

Effect Of Ca And Ph On Disease Severity Of Pink Rot Phytophthora Erythroseptica In Russett Norkotah Potato Solanum Tuberosum, Jared H. Benson

Theses and Dissertations

Phytophthora erythroseptica Pethyb. is a devastating fungal pathogen of potato (Solanum tuberosum). The pathogen causes a disease known as pink rot. Pink rot results in necrosis and decay of tubers; and is responsible for major losses pre and post harvest. Attributes of the disease are progressing toward epidemic proportions. To help prevent such dramatic outbreaks of the disease, understanding the factors associated with incidence will provide opportunities to control the pathogen. A link between pH and disease severity has been observed. We studied the effects of pH and Ca to determine their influence on disease development. Low pH and Ca …

Wpa News 81 (2008), World Pheasant Association

Galliformes Specialist Group and Affiliated Societies: Newsletters

WPA News (Summer 2008), number 81

Published by the World Pheasant Association

Factors Associated With Success In Guide Dog Training, Lara S. Batt, Marjolyn S. Batt, John A. Baguley, Paul D. Mcgreevy

Service and Support Animals Collection

Tests of motor laterality and behavioral reactivity, as well as salivary cortisol concentrations, were examined in this pilot study to identify dogs best suited to guide dog work. Over a 14-month period, lateralization tests were conducted and cortisol concentrations were determined on 3 separate occasions, and temperament testing was performed on 2. Potential guide dogs (N = 43) involved in this study were 5 golden retrievers (4 males, 1 female) and thirty-eight Labrador retrievers (8 black males, fifteen yellow males, 5 black females, and ten yellow females). Results from these tests were then compared with the ultimate success of the …

Fisheries Research Report No. 171 - Evaluation Of Exclusion Grids To Reduce The Bycatch Of Dolphins, Turtles, Sharks And Rays In The Pilbara Trawl Fishery, Peter Stephenson, S. Wells, J. A. King

Fisheries Research Reports

DBIF funded Project.

Considerable research on the documention of the bycatch of cetaceans, seals, turtles, and sea lions during trawl fishing operations has been undertaken worldwide. These include the Argentinean squid and hake trawl fisheries (Crespo et al., 1997; Fertl & Leatherwood, 1997), the Dutch pelagic trawl fishery (Couperus, 1997), the NE Atlantic pelagic trawl fishery (Tregenza & Collet, 1998) and the New Zealand squid fishery (Fishing News International, 2005).

In the Pilbara Fish Trawl Fishery, operating off the coast of Western Australia protected species including dolphins, turtles, sawfish, sea snakes as well as numerous sharks and ray species have …

Sheep Updates 2008 - Part 3, L. J. E. Karlsson, J. C. Greeff, L. Slocombe, K. Jones, N. Underwood, Fred Wilkinson, W. D. Hoffman, W. A. Mckiernan, V. H. Oddy, M. J. Mcphee, B. L. Mcintyre, P. F. Parnell, R. A. Clark, J. Timms, G. Griffith, C. Mulholland, P. Hyland, Danielle England, Fiona Jones, John Lucey, Martin Staines, Richard Morris, Megan Abrahams, Caroline Peek, Dennis Van Gool, Daniel Gardiner, Kari-Lee Falconer, Sandra Prosser, Mario D'Antuono, John Young, Andrew Thompson, Chris Oldham, Brown Besier, Angus Campbell, Ralph Behrendt

Sheep Updates

This session covers fiveteen papers from different authors:

CONTROLLING FLY STRIKE

1. Breeding for Blowfly Resistance - Indicatoe Traits, LJE Karlsson, JC Greeff, L Slocombe, Department of Agriculture & Food, Western Australia

2.A practical method to select for breech strike resistance in non-pedigreed Merino flocks, LJE Karlsson, JC Greeff, L Slocombe, K. Jones, N. Underwood, Department of Agriculture & Food, Western Australia

3. Twice a year shearing - no mulesing, Fred Wilkinson, Producer, Brookton WA

BEEF

4. Commercial testing of a new tool for prediction of fatness in beef cattle, WD Hoffman^A, WA McKiernan^A, VH Oddy …

Sheep Updates 2008 - Part 2, Meredith L. Sheil, Di Evans, Brown Besier, Tim Scanlon, Andre Martinho De Almeida, Johan Greeff, Tanya Kilminster, John Milton, Chris Oldham, B. L. Mcintyre, Alison Wheatley, John Lucey, Fiona Jones, Nick Costa, Ed Riggall, J. R. L. Hall, Robin Jacob, Dave Pethick, Dave Hopkins, Graham Gardner

Sheep Updates

This session covers eleven papers from different authors: The Sheep Room 1. Analgesia for Surgical Husbandry Procedures in Sheep and Other Livestock, Dr Meredith L. Sheil, Animal Ethics Pty Ltd, Associate Sydney University Faculty of Veterinary Science The Wool Enterprise 2. Unmulsed sheep - implications for chemical use, Di Evans & Brown Besier, Department of Agriculture and Food WA 3. Are Damara and Dorper sheep better adapted than Merinos to nutritional stress? - Growth rates, Tim Scanlon1, Andre Martinho de Almeida2, Johan Greeff1, Tanya Kilminster1, John Milton3, Chris Oldham1, Department of Agriculture and Food WA1, Instituto de Investigacao Cientifica Tropical, …

Sheep Updates 2008 - Part 1, David Hughes, Tony Higgs, Di Evans, Scott Hansen, Michael Paton, Mary Nenke

Sheep Updates

This session covers five papers from different authors: KEYNOTE 1. Global trends in consumer and community expectations and their affect on the market, Dr David Hughes, Imperial College, London. (Powerpoint) PLENARY 2. Animal welfare - trends and opportunities, Tony Higgs, Di Evans, Department of Agriculture and Food WA 3. Australia's live sheep exports to Saudi Arabia, Scott Hansen, Meat & Livestock Australia 4. Livestock Welfare Challenges in Road Transport, Dr Mike Paton, Department of Agriculture and Food, Western Australia 5. My 2020 Summit Experience, Mary Nenke, Producer Kukerin WA

Odor Evaluation And Gas Emission From Manure Of Dairy Heifers Fed High/Low - Forage Quality And High/Low-Concentrate Diets, Patrick A. Topper, Robin Brandt, Arlene Adviento-Borbe, Gustavo J. Lascano, Arlyn J. Heinrichs, Eileen F. Wheeler

Dairy Science

A heifer feeding trial evaluated the impact of high/low forage quality and high/low concentrate level nutrient-balanced diets on simultaneous odor and gas emissions from the manure. Gas concentration was determined using an infrared photoacoustic analyzer over a 24-hour period using a steady-state flux chamber setup containing urine:feces as-excreted from eight individual heifers. Odorous air samples were collected from chamber headspace and evaluated by six human assessors for pleasantness, intensity and detection threshold using a forced-choice dynamic olfactometer. Ammonia emission ranged from 0.64 to 3.94 mg NH3 cm-2 d-1 across diets. Average ammonia emission from the low concentrate (80% forage) diets …

Pygmy Rabbit (Brachylagus Idahoensis) Habitat Use, Activity Patterns And Conservation In Relationship To Habitat Treatments, Janet E. Lee

Theses and Dissertations

This study examined activity patterns and habitat use of pygmy rabbits (Brachylagus idahoensis) in mechanically treated and untreated areas in south-central Utah 2005-2008. We monitored fecal pellet plots in continuous sagebrush habitat as well as along treatment edges to record deposition and leporid presence over timed periods. Pygmy rabbit use of big sagebrush was higher than black-tailed jackrabbits (Lepus californicus) and mountain cottontail rabbits (Sylvilagus nuttallii ) (P< 0.01) relative to treated areas (P <0.01). We also compared pygmy rabbit use of areas with continuous sagebrush to residual sagebrush in a sample of mechanically treated areas. Our results suggest a treatment effect with higher (P <0.01) average counts of pygmy rabbit pellets in areas with continuous sagebrush compared to sagebrush strips and islands within treated areas. Before the big sagebrush biotype inhabited by pygmy rabbits is treated to reduce the occurrence and dominance of big sagebrush, we recommend managers consider two options. The first is no treatment, thus preserving, as is, the critical habitat of the pygmy rabbit and other sympatric big sagebrush obligate species of wildlife. The second option cautiously introduces the first prescription of habitat treatment ever recommended in relationship to the pygmy rabbit. This prescription includes recommended widths of the treated areas, seed mixes, widths of the preserved intact big sagebrush habitat for pygmy rabbits as well as suggested grazing systems for domestic livestock. Activity patterns of pygmy rabbits at their burrow were documented through the use of remote cameras. Photographs were analyzed for temporal and seasonal patterns of activity. Our results suggested that time of day was important in the activity level of pygmy rabbits while season was not. Pygmy rabbits were active during all time periods of the day but the greatest levels of activity occurred at night. Numerous other wildlife species were recorded by our remote cameras including other species of leporids, birds, rodents, reptiles and terrestrial predators.

Slides: Protecting Biodiversity Through Ecosystem Services, Barton "Buzz" Thompson

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Barton “Buzz” Thompson, Perry L. McCarty Director, Woods Institute for the Environment, Stanford University Law School

14 slides

Slides: Threats To Biological Diversity: Global, Continental, Local, J. Michael Scott

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: J. Michael Scott, U.S. Geological Survey, Idaho Cooperative Fish and Wildlife Research Unit, University of Idaho

38 slides

Slides: Global Warming And The Endangered Species Act, Kieran Suckling

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

Presenter: Kieran Suckling, Center for Biological Diversity

15 slides

Agenda: Shifting Baselines And New Meridians: Water, Resources, Landscapes, And The Transformation Of The American West, University Of Colorado Boulder. Natural Resources Law Center

Shifting Baselines and New Meridians: Water, Resources, Landscapes, and the Transformation of the American West (Summer Conference, June 4-6)

The Center’s 29th annual conference will focus on the changes in the West resulting from rapid population growth, development, disrupted historical weather patterns and the effects of those changes on land, water, and energy resources. Speakers and panelists will address the adaptability of the legal and political institutions and how the transformation of the West may foreshadow fundamental changes to these institutions.

The agenda includes panel discussions that will address:

• Water for the 21^st Century —the big questions in Western water and rethinking Western water law.
• The Future of Energy —practical and sophisticated solutions to overcome the energy …

Northern Demersal Scalefish Managed Fishery, Stephen J. Newman, K.A. Smith, Craig L. Skepper, Peter Stephenson

Ecologically Sustainable Development (ESD) series

Ecologically Sustainable Development (ESD) is the concept that seeks to integrate short and longterm economic, social and environmental effects in all decision-making. The Western Australian Government is committed to the concepts of ESD and these principles are implicitly contained in the objectives of the Fisheries Resources Management Act 1994 (FRMA).

Fisheries Research Report No. 175 - An Assessment Of The Finfish Catch By Recreational Fishers, Tour Operators, Commercial Lobster Fishers And Commercial Wetline Fishers From The Houtman Abrolhos Islands During 2006, Neil R. Sumner

Fisheries Research Reports

The catch of finfish from the Houtman Abrolhos Islands was estimated for recreational boats, tour operators, commercial rock lobster fishers and occupants of their camps on the islands. Separate methods were used for each of the different sectors due to the variation in fishing activities. Recreational boats and commercial rock lobster fishers were surveyed to determine catches, whereas the catches by tour operator and commercial wet-line fishers were determined from their compulsory catch and effort returns submitted to the Department of Fisheries.

The reported commercial wetline catch for pink snapper, sweetlip emperor and Western Australian dhufish greatly exceeded the combined …

Fisheries Research Report No. 176 - Regrowth Of Pilchard (Sardinops Sagax) Stocks Off Southern Wa Following The Mass Mortality Event Of 1998/99, Daniel J. Gaughan, M Craine, Peter Stephenson, Timothy I. Leary, Paul Lewis

Fisheries Research Reports

Final FRDC Report – Project 2000/135

This project produced time series of estimates of spawning biomass for pilchards in four purse seine management zones in Western Australia, three on the south coast and one on the west coast. The pilchard stocks in Western Australia have recovered strongly since the 1998/99 mass mortality.

This project has shown that the fishery independent and fishery dependent methods applied to Western Australia’s pilchard fisheries cannot provide precise estimates of the size of the pilchard spawning biomass in each management region. Although the trends indicated by the age-structured simulation model are reliable and provide good …

A Strategy For Managing The Recreational Catch Of Demersal Scalefish In The West Coast Bioregion. Decisions By The Minister For Fisheries, Jon Ford (Minister For Fisheries; The Kimberley, Pilbara And Gascoyne)

Fisheries Management Papers

The following recreational fisheries management package is a result of an extensive public consultation process. The package has been carefully developed to deliver the required reduction in catches. It is important to understand that each management measure contributes to the reduction in catches necessary to give these stocks a chance to rebuild and that no measure on its own will deliver the required reduction in catch.

To ensure the ongoing recovery of stocks, an adaptive approach to management has been adopted. This approach will involve an ongoing review of the effectiveness of these management arrangements, and take into account the …

Fisheries Research Report No. 177 - A 12-Month Survey Of Recreational Boat-Based Fishing Between Augusta And Kalbarri On The West Coast Of Western Australia During 2005-06, N. R. Sumner, P C. Williamson, Stuart J. Blight, Daniel J. Gaughan

Fisheries Research Reports

A 12-month survey of boat-based recreational fishing in the West Coast Bioregion (Augusta to Kalbarri) of Western Australia was conducted at boat ramps between 1st July 2005 and 30th June 2006. During the survey a total of 15,999 boat crews were interviewed, of which 13,185 (82%) had been undertaking some form of fishing activity and, of these, 10,382 (or 79%) of fishing boat crews had been ocean line fishing. The total annual recreational boat based fishing effort for the West Coast Bioregion was estimated to be 1,557,000 fisher hours (95%CI: 1,495,000 – 1,620,000), which is a 15.5% increase in nominal …