Digital Commons Network^™

Turtle Town: Creating A Self-Sustainable Ecosystem Using An Ecological Approach To Turtle Aquarium Design, Sheena K. O'Donnell

Undergraduate University Honors Capstones

Typical pet turtle tank setups do not utilize the complete nutrient cycle seen in a functional natural ecosystem. This dysfunction results in waste and nutrient buildup, which is currently managed by water changes and regular tank cleaning. This type of maintenance can be costly and time-consuming -- not to mention unpleasant and hazardous to the aquarium owner's health. This study tested the effectiveness of using plants as part of a proposed ecological tank design to minimize waste buildup by utilizing nutrients. Wastewater from a dirty turtle tank was transferred to a tank setup containing three plants (Experimental Batch 1), while …

The Effect Of Physical And Demographic Factors And Training On The Time-To-Adoption Of Domestic Cats In A Local Shelter, Deborah T. Stratton

Senior Honors Projects, 2010-2019

About 7.6 million animals enter shelters each year (Pet Statistics. (n.d.)). Many factors have been examined to determine what affects adoption rates for these companion animals. A study of a kill-shelter has found that age, gender, and circumstance all influenced cat adoption rates (Lepper et. al., 2002). Training was also found to increase the adoption rates of dogs (Luescher and Medlock, 2009). Data on cat adoptions were collected from Charlottesville-Albemarle SPCA (a no-kill shelter) and were analyzed using Sigma Plot and STATA. Training cats took place at Rockingham/Harrisonburg SPCA and the data was also analyzed using Sigma Plot. Color, age, …

Fox Squirrel Response To Bark Calls, Michael Ryan Keller

Undergraduate Honors Thesis Collection

Sciurus niger (fox squirrel) produces a characteristic bark call that has long been assumed to serve as an alarm call. However, to date, no definitive research has been conducted to support these assumptions. Over the course of six months, I executed an audio playback study with free-living fox squirrels in central Indiana. When a squirrel came into view, its behavior was video recorded during a 30 second playing of either an S. niger bark call or a cardinal (Cardinalis cardinals) control call. The subjects were also filmed thirty seconds prior to and immediately following the call. Each squirrel's behavior was …

The Passive Perching Mechanism In Passeriformes Birds, Deena Ahmed Elsahy

Undergraduate Honors Thesis Collection

Passeriformes, or perching birds and songbirds, are an order of birds that includes crows, jays, starlings, wrens, cardinals, finches and many other species. It has been suggested that these birds are able to passively perch due to a tendon locking mechanism. This mechanism allows them to rest for hours in trees without falling. When the bird's foot is placed on a perch, the weight of the bird causes the tendons to pull, thus closing the toes around the perch. However, there is currently much debate about whether the mechanism is entirely passive. Recent studies argue that the mechanism must be …

Role Model Fathers Or Deadbeat Dads? A Study Of Peromyscus Paternal Behavior, Taylor Wapshott

Senior Theses

Paternal behavior is a largely understudied and poorly understood topic, especially in mammalian species. Many current mammalian models for paternal behavior use a comparative approach, taking advantage of natural differences in behavior between closely related species. This study compared paternal behavior in two rodent species, namely Peromyscus maniculatus (BW) and Peromyscus polionotus (PO). PO rodents have been shown to be monogamous, but there have been no studies of their paternal behavior at this time. 10 PO males and 12 BW males were filmed in their home cage for a 10 minute period following initial disturbance of their nest and removal …

Determining Forage Intake Of Nursing Calves Grazing Native Sandhills Rangeland, Jennifer A. Walker

Department of Animal Science: Dissertations, Theses, and Student Research

Effective management of grazing lands is important for longevity and productivity. Accurate calculations of stocking rates per animal unit will aid in long term sustainability. Calculating stocking rates for cattle can prove challenging for cows and nursing calves. Limited research has been conducted to determine forage intake of the nursing calf pre-weaning. The objective of Trial 1 was to determine nursing calf forage intake over time until weaning. Trial 1 used 8 crossbred cow-calf pairs in experiment 1 and 12 pairs in experiment 2. Pairs were separated into two groups rotating between grazing upland range or housed in individual pens …

Phenotypic Variation In The Model Organism, Danio Rerio, Rachel D. Champaigne, Kim H. Brown

Student Research Symposium

Model organisms are used to study evolutionary conserved traits. Zebrafish (Danio rerio) are used a model organism because of their highly fecundity, external fertilization, and robust nature, making them highly adaptable to environmental and genetic variation. In an effort to limit data variation that lies outside of topic interest, phenotypic measures of variation must be performed, understood, and taken into consideration for future studies. A common measurement of phenotypic variation in fish is in the maximum (Ucrit) swimming speeds. Inter and intra-strain variation in zebrafish Ucrit swimming speeds will be observed in a swim tunnel. Baseline values will …

Transcriptome Analysis Of Sea Lamprey Embryogenesis, Zakary Ilya Yermolenko

Seton Hall University Dissertations and Theses (ETDs)

The sea lamprey (Petromyzon marinus) has survived throughout evolution for hundreds of millions of years. It is considered an invasive species to the Great Lakes that has caused dramatic changes in the ecosystem for fish communities resulting in the collapse of a fishing industry that was previously valued at billions of dollars. Successful management of the sea lamprey is essential to a sustainable fishing industry and biodiversity. Therefore sea lamprey embryos were studied at various stages of development by growing them in a simulated habitat. RNAs from adult female ovaries and embryos at different time points during embryogenesis …

Morphometric Studies On Subadult Liza Subviridis And Sillago Sihama From Sonmiani Bay (Miani Hor), Balochistan, Pakistan, Muhammad A. Gondal, Naureen A. Qureshi, Noor U. Saher

Journal of Bioresource Management

Length-weight relationship of Liza subviridis and Sillago sihama (Family: Mugilidae; Class: Pisces and Family: Sillaginidae; Class: Pisces) in subadults sampled from Somiani Bay Balochistan, Pakistan during 2002, 2003 and 2006 was analyzed. Liza subviridis showed positive allometry (3.23) in 2002, and negative allometry during 2003 (2.95) and 2006 (1.95). Sub adults of Sillago sihama showed positive allometry during 2002 (3.10) and 2003 (3.13). An isometric condition (3.02) was observed in the samples of Sillago sihama collected from Bhaira in 2006.

On Individual, Sex And Age Differentiation Of Indian House Crow (Corvus Splendens) Call: A Preliminary Study In Potohar, Pakistan, Waqas Hameed, Inayat Ullah, Safia Janjua, Fakhar -I- Abbas, Afsar Mian

Journal of Bioresource Management

Considering importance of acoustics studies in population biology, 500 calls of the Indian House Crow (Corvus splendens) were recorded in morning - mid-afternoon hours (January-February, 2009) from 23 sites of urban areas of Potahar (Punjab, Pakistan). Calls were recorded using Sony CFS 1030 S sound records (sampling rate = 48 KHz) and edited using Sound Analysis Pro (Version 1.02). software using FFT method rate 50%, data window 9.27 ms, advanced window 1.36 ms. Through editing of calls, we selected 60 (37 ♂♂, 17 ♀♀, 6 Juvenile ♂♂) good quality spectrograms for detailed analysis. Spectrograms were characterized by rapid frequency modulations …

Review: Pollination, Pollinated And Pollinators Interaction In Pakistan, Mohammad Irshad, Elizabeth Stephen

Journal of Bioresource Management

The agriculture sector is important in the overall economy and export earnings of Pakistan. Pollination is an essential ecosystem service that depends on symbiosis between species, the pollinated and the pollinator. Animal mediated pollination contributes to the sexual production of over 90% species of modern angiosperms. Effective pollination results in increased crop production, quality improvement and more seed production. Many fruits, vegetables, edible oil crops, stimulant crops and nuts are highly dependent on bee pollination. Worldwide value of pollinators is €153 billion (217 billion US dollars). The production value of pollinated dependent crop in Pakistan is quantified to be 1.59 …

Research Note: Contribution To Mushroom Flora Of Rawalpindi-Islamabad, Pakistan, Kishwar Sultana, Naveeda Riaz, Gulshan Irshad, Ali Nauman Khan

Journal of Bioresource Management

Seven hymenomycetous fungi (mushrooms) were collected from the twin cities area during July 2008. These were identified as the members of the order Agaricales, class Basidiomycetes. They belong to five genera: *Clitocybe fragrans, *Collybia cookie, *Coprinus radians, *Coprinus sterculinus, *Volvariella bingensis, Volvariella parvula, and Termitomyces microcarpus. Five of them, marked with asterisk were reported for the first time from Pakistan.

Diagnostic Accuracy Of C-Reactive Protein In Neonatal Sepsis, Sidra Younis, Muhammad Ali Sheikh, Amjad Ali Raza

Journal of Bioresource Management

Sepsis is the most common cause of neonatal mortality and is responsible for 30-50% of total neonatal deaths each year in developing countries. The objective of the study was to determine the diagnostic accuracy of C-reactive protein (CRP) in neonatal sepsis. Fifty nine consecutive patients with risk factors and clinical features suggestive of CRP sepsis were selected as per operational definition and fulfilling the inclusion and exclusion criteria. Detailed physical examination was carried out. Blood sample for culture and CRP was taken from all the patients. Results of blood culture and CRP were noted down in the performa. Statistical analysis …

Level Of Uv-B Radiation Influences The Effects Of Glyphosate-Based Herbicide On Fitness Of The Spotted Salamander, Nicholas A. Levis

Masters Theses & Specialist Projects

Numerous causes have been implicated in contributing to amphibian population declines since the 1980's, with habitat modification, ultraviolet radiation (UV-B) and environmental contaminants (such as glyphosate-based herbicide) being among the most common. This study identifies the effects of a generic glyphosate-based herbicide (GLY- 4 Plus) on mortality, immune function, body condition, and morphological plasticity of larvae of the spotted salamander (Ambystoma maculatum) under conditions that reflect open and closed canopy light regimes. Larval salamander responses to glyphosate-based herbicide varied depending on UV-B conditions. In general, it appears that an open canopy (i.e. greater UV-B exposure) may confer fitness benefits. In …

Juvenile Domestic Pigs (Sus Scrofa Domestica) Use Human-Given Cues In An Object Choice Task, Christian Nawroth, Mirjam Ebersbach, Eberhard Von Borell

Social Cognition Collection

Research on the comprehension of human-given cues by domesticated as well as non-domesticated species has received considerable attention over the last decade. While several species seem to be capable of utilizing these cues, former work with domestic pigs (Sus scrofa domestica) has shown inconclusive results. In this study, we investigated the use of human-given cues in an object choice task by young domestic pigs (N = 17; seven weeks of age) who had very limited human contact prior to the experiments. Subjects had to choose between two bowls of which only one was baited with a reward. Over the course …

A Likelihood Analysis Of The Introduction Of Marine Pests To Western Australian Ports Via Commercial Vessels, Samantha D. Bridgwood, Justin I. Mcdonald

Fisheries Research Reports

The following document is an analysis of the likelihood of an introduced marine pest (IMP) being translocated by commercial vessels into Western Australian (WA) state waters. This analysis is presented at the bioregional level (North Coast, Gascoyne Coast, West Coast and South Coast bioregions) and at the port level. The ports include: Albany, Broome, Bunbury, Dampier, Esperance, Fremantle, Geraldton, Port Hedland, Useless Loop and Wyndham. The analyses are based on vessel data supplied by the ports for the period of 2011. As such, all outputs and assumptions are based on data from that period and while the likelihood may change …

Status Of Demersal Finfish Stocks On The West Coast Of Australia, David V. Fairclough, Brett W. Molony, Brett M. Crisafulli, Ian S. Keay, Sybrand Alexander Hesp, Ross J. Marriott

Fisheries Research Reports

Assessments of the key indicator species for the West Coast Demersal Scalefish Resource (WCDSR; West Australian dhufish Glaucosoma hebraicum, Snapper Pagrus auratus and Baldchin groper Choerodon rubescens) in 2007 and 2009 demonstrated that the stocks were experiencing overfishing. Thus, between late 2007 and early 2010, substantial changes were made to the management of the commercial and recreational fisheries that exploit the WCDSR. These were designed to reduce catches of the entire suite of demersal scalefish species (and of each indicator species) by both the commercial and recreational sectors in the West Coast Bioregion (WCB) by at least 50 % of …

Avs Corner, May 2014, Kathy Still, Johanna Johnson, Allison Millican, Megan Kelley, Michelle Brauneis, Tina Rowland

AVS Corner

No abstract provided.

The Integration Of Google Maps Into American Kestrel, Falco Sparvarius, Nest Trail Programs, Dylan M. Harper

Undergraduate Honors Theses

American Kestrel Nest Box Programs have been established since the mid 1960’s. The population of American Kestrels (Falco sparverius) along nest box trails has decreased by 47 percent since their original implementation. There are existing technologies that can help in the location of prime kestrel habitat (open fields with conspicuous perching locations) along highways, which reduces the amount of labor in searching for new box locations. These technologies can also help increase the efficiency of monitoring and maintaining kestrel nest trail programs. This study provides an example of how Google Maps can be implemented into a kestrel trail …

Taxonomic And Seasonal Variation Among Extant Hyracoids Based On Dental Microwear Texture Analysis, Ann Marie Walcutt

Graduate Theses and Dissertations

A number of works have been published on habitats and diets of living hyraxes but much remains to be learned about the paleoenvironment contexts of the much larger, more dominant but now extinct forms of the order. Here, I analyze the dental microwear of modern hyraxes to assess dietary and ecological relationships among the four extant species of Procaviidae: Heterohyrax brucei, Procavia capensis, Dendrohyrax arboreus, and Dendrohyrax dorsalis. The purpose of this study was to establish an extant baseline series for the interpretation of microwear texture patterns, and inference of diets, of extinct members of the …

American Bison Ecology And Bison-Cattle Interactions In An Isolated Montane Environment, Dustin H. Ranglack

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

As bison are considered to be ecologically extinct, and negative interactions between bison and cattle are perceived to limit bison restoration and cattle production, I designed a series of studies to test for potential competition between bison (Bison bison) and cattle (Bos taurus) for forage on the Henry Mountains in southern Utah. These studies provide insight into key information gaps previously identified by the Utah Division of Wildlife Resources (UDWR), Bureau of Land Management, and the local grazing association. The results indicate that bison and cattle are not strong competitors for forage on the Henry Mountains. …

Ambient Temperature, Calf Intakes, And Weight Gains On Preweaned Dairy Calves, Sheldon D. Holt

All Graduate Theses and Dissertations, Spring 1920 to Summer 2023

There has been little research conducted on the physiological response of calves to temperatures outside thermal neutrality and its effects on intake and weight gain. The effects of ambient temperature on Holstein dairy calves intakes and weight gain were evaluated over a 12-month period at the Utah State University Caine Dairy.

Ambient temperature was monitored using a weather station located 1.3 kilometers from the dairy. Calf health was monitored daily using the University of Wisconsin-Madison School of Veterinary Medicine scoring criteria. Calves were fed whole milk and free choice calf starter. Weight gain, wither and hip height, starter intake, and …

A Male Spider’S Ornamentation Polymorphism Maintained By Opposing Selection With Two Niches, Bo Deng, Alex Estes, Brett Grieb, Douglas Richard, Brittney Hinds, Eileen Hebets

Eileen Hebets Publications

The Levene mechanism to maintain genotypic polymorphism by opposing selection on genotypes in multiple niches was proposed 60 years ago, and yet no systems were found to satisfy the mechanisms rather restrictive conditions. Reported here is such an example that a wolf spider population lives in a habitat of mixed rocks and leafy litter for which the females are phenotypically indistinguishable and the males have two distinct phenotypes subject to opposing selection with respect to the substrates. Census data is best-fitted to a population genetics model of the Levene type. A majority of the best fit support polymorphism, with many …

Tactical Adjustment Of Signaling Leads To Increased Mating Success And Survival, Laura Sullivan-Beckers, Eileen A. Hebets

Eileen Hebets Publications

Most sexually reproducing animals overcome the challenge of searching for and attracting mates by utilizing signals that are broadcast through a spatially and temporally varying environment. A diverse suite of behavioral solutions exist for overcoming such environmental variability, including the adjustment of signaling behavior based upon receiver feedback. Few studies have directly examined the relationship between such tactical signaling adjustments and proxies of male fitness; the few that have, failed to find a relationship. Using the wolf spider, Schizocosa rovneri, we set out to first quantify among-male variation in the form and degree of responsiveness to female feedback. Following …

Effects Of Distillers Grains Plus Solubles And Monensin Supplementation On Yearlings Grazing Smooth Bromegrass, Tyler L. Hasenauer

Department of Animal Science: Dissertations, Theses, and Student Research

Supplementing cattle on grass is an effective way of increasing animal efficiency and grass utilization. Distiller grains plus solubles (DGS) supplementation has been repeatedly proven as an effective supplement by providing ruminally undegradable protein (RUP), fat, and highly digestible fiber. The effects of monensin supplementation on grazing cattle are variable. Although some research has shown a decrease in forage organic matter intake (FOMI), the popular belief is monensin increases ADG while maintaining DMI in a grazing situation. Two experiments were designed to observe the effects of DGS and monensin supplementation on cattle grazing smooth bromegrass. In the first study, ADG …

Effects Of Conventional And Alternative Curing Methods On Processed Turkey Quality Traits, Amy Lynn Redfield

Department of Animal Science: Dissertations, Theses, and Student Research

This study compared physicochemical and sensory qualities of deli-style turkey breast produced pre-converted celery juice powder (CP; for alternative curing) or sodium nitrite (SN; for conventional curing). Formulas were designed to include 0, 50, 100, 150, and 200 ppm ingoing sodium nitrite or the equivalent from CP or SN, and 3 replicates of products were manufactured. Turkey and curing brines were tumbled, stuffed, and cooked to an internal temperature of 73.9^oC. Products were stabilized and sliced into 12 mm slices (physicochemical trait analysis) and 2 mm slices (sensory trait analysis). Physicochemical traits measured only on d 0 were …

Genomic Predictions For Age At Puberty And Reproductive Longevity In Sows Using Bayesian Methods, Katherine Lindsay Lucot

Department of Animal Science: Dissertations, Theses, and Student Research

Including marker-assisted selection in breeding programs is potentially more efficient than traditional selection for improving traits that are expensive or difficult to measure. One of the challenges of genomics is the lack of robustness of marker effects across populations and over time (generations) and the cost to commercial producers of high-density arrays. The objective of this study was to analyze differences in the proportion of phenotypic variation explained by different fractions of major 1 Mb windows and SNPs. Using a population of Nebraska Index Line and commercial Large White x Landrace females (n = 1,234) generated in 11 batches, …

Alteration Of Host Cell Ubiquitination By The Intracellular Bacterial Pathogen Coxiella Burnetii, Lindsey Elizabeth Pritchett

Poultry Science Undergraduate Honors Theses

The intracellular bacterial agent of Q fever, Coxiella burnetii, replicates within a phagolysosome-like parasitophorous vacuole (PV) in human macrophages and delivers effector proteins to the host cytosol via a Dot/Icm type IV secretion system (T4SS). T4SS effectors are critical for PV formation and prevention of host cell death that allows sufficient time for bacterial replication. Recruitment of ubiquitin-related components to the C. burnetii PV is also predicted to be involved in PV formation and bacterial replication and is likely controlled by effector proteins. In this study, we assessed the role of the Dot/Icm T4SS in regulating ubiquitination by comparing subcellular …

Reproduction And Nesting In Teleost Fish, With A Focus On Reproduction In Centrarchids And Specific Analysis Of Nesting In Lepomis Megalotis, Rebecca Irene Allee

Undergraduate Honors Thesis Collection

Fish represent the most diverse and oldest living class of vertebrates, making up approximately 48% of all known members of the subphylum Vertebrata (Bolis, et al. 2001). They are able to live in a wide variety of habitats, from salt water to fresh water and from cold polar seas to areas of intense pressure in the depths of the ocean (Moyle and Cech 1996). Because of this overwhelming diversity, the evolution and ecology of fishes has been a dynamic field of study (Moyle and Cech 1996). Researchers have generally divided fish into three distinct groups: jawless fishes (Class Agnatha), …

Lifecycle Efficiency Of Mice Divergently Selected For Heat Loss, Adrienne Bhatnagar

Department of Animal Science: Dissertations, Theses, and Student Research

Divergent selection for heat loss as an indication of maintenance energy requirements in mice resulted in a low (ML) and high maintenance line (MH), and an intermediate control line (MC). Improved feed efficiency has been observed in ML mice, which would be economically beneficial in livestock species. However, previous work showed evidence of unfavorable correlated responses to selection in ML mice compared to MH mice. Therefore, the objective of this study was to model a lifecycle similar to a livestock production system using these lines and determine if these correlated responses diminish the benefit of improved feed efficiency by calculating …