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Saucer Scallop Resource Of Shark Bay Harvest Strategy : 2020-2025 : Version 1.0, Department Of Fisheries

Fisheries Management Papers

No abstract provided.

Ecological Risk Assessment For The Peel-Harvey Estuarine Fishery, E. A. Fisher, S. N. Evans, Cameron J. Desfosses, Danielle Johnston, R Duffy, K. A. Smith

Fisheries Research Reports

An ecological risk assessment (ERA) of the Peel-Harvey Estuarine Fisheries (Fisheries) was convened by the Department of Primary Industries and Regional Development, Western Australia (WA) on 9 September 2020. ERAs are conducted by the Department as part of its Ecosystem Based Fisheries Management framework and the outputs will inform the updated harvest strategies for these resources, as well as the upcoming Marine Stewardship Council (MSC) re-assessment of the Fisheries. The Fisheries within the scope of this current ERA include the commercial net and crab trap fishery (West Coast Estuarine Managed Fishery: Area 2), and the blue swimmer crab recreational (drop …

Illegal Killing Of Nongame Wildlife And Recreational Shooting In Conservation Areas, Jay D. Carlisle, Eve C. Thomason, James R. Belthoff, Julie A. Heath, Kristina J. Parker, Heather M. Hayes, Madeline C. Alberg, Sandra M. Amdor, Steven E. Alsup, Stephanie E. Coates

Intermountain Bird Observatory Publications and Presentations

Illegal killing of nongame wildlife is a global yet poorly documented problem. The prevalence and ecological consequences of illegal killing are often underestimated or completely unknown. We review the practice of legal recreational shooting and present data gathered from telemetry, surveys, and observations on its association with illegal killing of wildlife (birds and snakes) within conservation areas in Idaho, USA. In total, 33% of telemetered long‐billed curlews (Numenius americanus) and 59% of other bird carcasses found with known cause of death (or 32% of total) were illegally shot. Analysis of spatial distributions of illegal and legal shooting is …

International Workshop On Recreational Fishing Surveys, Rachel Marks, Cameron J. Desfosses, Alissa Tate

Fisheries Research Reports

Recreational fishing surveys have been conducted by the Department of Primary Industries and Regional Development (DPIRD, formerly Department of Fisheries) since 1975 (Tate et al., 2020). Within Western Australia, the first international workshop on recreational fishing surveys was held in January 2010 at the Western Australian Fisheries Marine Research Laboratories in Perth. The workshop aimed to audit existing survey methods and make recommendations for the design of integrated surveys to estimate recreational fishing harvest, catch and effort at statewide and bioregional scales (Wise & Fletcher 2013).

Coyotes, Rick Tischaefer

Wildlife Damage Management Technical Series

The coyote (Canis latrans; Figure 1) is a medium-sized member of the canid family. Once primarily found in western deserts and grasslands, coyotes have expanded their range across North America and into diverse habitats, including urban areas. This expansion occurred during a time of extensive habitat change and efforts by people to suppress coyote populations to prevent damage. Coyotes can cause a variety of conflicts related to agriculture, natural resources, property, and human health and safety. This document highlights a variety of methods for reducing those conflicts. Coyotes are a highly adaptable species and may become habituated to some management …

Aquaculture Development Plan For Western Australia: Focusing On The Key Foundations Of Growth - November 2020, Department Of Primary Industries And Regional Development, Western Australia

Fisheries Published Reports

The Aquaculture Plan has been developed in response to a government commitment and informed by input from industry and the Regional Development Commissions. Consultation on this Aquaculture Plan provided further opportunity for comments and discussions within the aquaculture sector as well as relevant external agencies. A final draft was released on the Department of Primary Industries and Regional Development’s (DPIRD) website for a consultation period, affording the opportunity for public feedback.

The Aquaculture Plan is included and referenced in DPIRD’s Primary Industries Plan.

The development of the Aquaculture Plan has also been informed by the Aquaculture Industry Engagement Consortium (2017), …

Exploring A Novel Substrate-Borne Vibratory Signal In The Wolf Spider Schizocosa Floridana, Malcolm F. Rosenthal, Eileen Hebets, Rowan H. Mcginley, Cody Raiza, James Starrett, Lin Yan, Damian O. Elias

Eileen Hebets Publications

Animals communicate using a diversity of signals produced by a wide array of physical structures. Determining how a signal is produced provides key insights into signal evolution. Here, we examine a complex vibratory mating display produced by male Schizocosa floridana wolf spiders. This display contains three discrete substrate-borne acoustic components (known as “thumps”, “taps”, and “chirps”), each of which is anecdotally associated with the movement of a different body part (the pedipalps, legs, and abdomen respectively). In order to determine the method of production, we employ a combination of high-speed video/audio recordings and SEM imaging of possible sound-producing structures. Previous …

Testing The Hypothesized Antipredator Defence Function Of Stridulation In The Spiny Orb-Weaving Spider, Micrathena Gracilis, Tyler B. Corey, Eileen A. Hebets

Eileen Hebets Publications

The observable diversity of antipredator defenses across organisms demonstrates predation’s impact on trait evolution. The functions of many traits that are presumed to have an antipredator function have never been directly tested. The spiny orb-weaving spider, Micrathena gracilis, for example, stridulates when grasped. While stridulation was first hypothesized to be an antipredator defense nearly 50 years ago, no data exist to support this hypothesis. To explore the form and function of M. gracilis stridulation, we first quantified the behavioral and acoustical properties of sound production. Next, using laboratory assays, we directly tested the effect of stridulation on survival with …

Spotted Owls And Forest Fire: Comment, Gavin M. Jones, R. J. Gutiérrez, William M. Block, Peter C. Carlson, Emily J. Comfort, Samuel A. Cushman, Raymond J. Davis, Stephanie A. Eyes, Alan B. Franklin, Joseph L. Ganey, Shaula Hedwall, John J. Keane, Rodd Kelsey, Damon B, Lesmeister, Malcolm P. North, Susan L. Roberts, Jeremy T. Rockweit, Jamie S. Sanderlin, Sarah C. Sawyer, Ben Solvesky, Douglas J. Tempel, Ho Yi Wan, A. Leroy Westerling, Gary C. White, M. Zachariah Peery

United States Department of Agriculture Wildlife Services: Staff Publications

Western North American forest ecosystems are experiencing rapid changes in disturbance regimes because of climate change and land use legacies (Littell et al. 2018). In many of these forests, the accumulation of surface and ladder fuels from a century of fire suppression, coupled with a warming and drying climate, has led to increases in the number of large fires (Westerling 2016) and the proportion of areas burning at higher severity (Safford and Stevens 2017, Singleton et al. 2018). While the annual area burned by fire is still below historical levels (Taylor et al. 2016), some forest types in the west …

Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Xxv. Description Of Pandinurus Awalei Sp. N. And The Male Of Pandiborellius Somalilandus (Kovařík, 2012), With Remarks On Recent Synonymies (Scorpionidae: Pandininae), František Kovařík, Graeme Lowe, Hassan Sh A. Elmi

Euscorpius

A new species Pandinurus awalei sp. n. is described from Somaliland. The male of Pandiborellius somalilandus (Kovařík, 2012) is also described for the first time and sexual dimorphism of the species is defined. The habitus, morphology and habitats of both species are illustrated in detail with color and UV fluorescence images, including both live and preserved specimens. The species Pandinurus intermedius (Borelli, 1919) and Pandipalpus lowei (Kovařík, 2012) of Pandininae that were synonymized by Prendini & Loria (2020) are reinstated as valid species.

Atlantic Salmon (Salmo Salar) Neurocranium, Connor Depriest, Nadia Abeido, David Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

9.0 cm in length. Neurocranium scan of an Atlantic Salmon (Salmo salar). Collected from Two Bills Seafood on 04/09/20 by Nadia Abeido and Connor Depriest.

Loci Associated With Antibody Response In Feral Swine (Sus Scrofa) Infected With Brucella Suis, Courtney F. Pierce, Vienna R. Brown, Steven C. Olsen, Paola Boggiatto, Kerri Pedersen, Ryan S. Miller, Scott E. Speidel, Timothy J. Smyser

United States Department of Agriculture Wildlife Services: Staff Publications

Feral swine (Sus scrofa) are a destructive invasive species widespread throughout the United States that disrupt ecosystems, damage crops, and carry pathogens of concern for the health of domestic stock and humans including Brucella suis—the causative organism for swine brucellosis. In domestic swine, brucellosis results in reproductive failure due to abortions and infertility. Contact with infected feral swine poses spillover risks to domestic pigs as well as humans, companion animals, wildlife, and other livestock. Genetic factors influence the outcome of infectious diseases; therefore, genome wide association studies (GWAS) of differential immune responses among feral swine can provide …

A Review Of Avian Influenza A Virus Associations In Synanthropic Birds, Susan A. Shriner, J. Jeffrey Root

United States Department of Agriculture Wildlife Services: Staff Publications

Avian influenza A viruses (IAV) have received significant attention due to the threat they pose to human, livestock, and wildlife health. In this review, we focus on what is known about IAV dynamics in less common avian species that may play a role in trafficking IAVs to poultry operations. Specifically, we focus on synanthropic bird species. Synanthropic species, otherwise known as peridomestic, are species that are ecologically associated with humans and anthropogenically modified landscapes, such as agricultural and urban areas. Aquatic birds such as waterfowl and shorebirds are the species most commonly associated with avian IAVs, and are generally considered …

Reddyanus Justi Sp. N. From Laos (Scorpiones: Buthidae), František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

A new species Reddyanus justi sp. n. from Laos is described, fully complemented with color photographs of live and preserved specimens. The new species is characterized by the irregular quadrilateral shape of the subaculear tubercle in males. In addition to analysis of external morphology and hemispermatophore, we also describe the karyotype (2n=12)

Mandibulofacial Dysostosis Attributed To A Recessive Mutation Of Cyp26c1 In Hereford Cattle, Renae L. Sieck, Anna M. Fuller, Patrick S. Bedwell, Jack A. Ward, Stacy K. Sanders, Shi-Hua Xiang, Sichong Peng, Jessica Lynn Petersen, David J. Steffen

Department of Animal Science: Faculty Publications

In spring 2020, six Hereford calves presented with congenital facial deformities attributed to a condition we termed mandibulofacial dysostosis (MD). Affected calves shared hallmark features of a variably shortened and/or asymmetric lower mandible and bilateral skin tags present 2–10 cm caudal to the commissure of the lips. Pedigree analysis revealed a single common ancestor shared by the sire and dam of each affected calf. Whole-genome sequencing (WGS) of 20 animals led to the discovery of a variant (Chr26 g. 14404993T>C) in Exon 3 of CYP26C1 associated with MD. This missense mutation (p.L188P), is located in an α helix of …

The Endangered California Condor (Gymnogyps Californianus) Population Is Exposed To Local Haemosporidian Parasites, M. Andreína Pacheco, Chris N. Parish, Timothy J. Hauck, Roberto F. Aguilar, Ananias A. Escalante

Harold W. Manter Laboratory of Parasitology: Library Materials

The endangered California Condor (Gymnogyps californianus) is the largest New World Vulture in North America. Despite recovery program success in saving the species from extinction, condors remain compromised by lead poisoning and limited genetic diversity. The latter makes this species especially vulnerable to infectious diseases. Thus, taking advantage of the program of blood lead testing in Arizona, condor blood samples from 2008 to 2018 were screened for haemosporidian parasites using a nested polymerase chain reaction (PCR) protocol that targets the parasite mitochondrial cytochrome b gene. Plasmodium homopolare (Family Plasmodiidae, Order Haemosporida, Phylum Apicomplexa), was detected in condors captured …

Tadpole Of The Amazonia Frog Edalorhina Perezi (Anura: Leptodactylidae) With Description Of Oral Internal And Chondrocranial Morphology, Filipe A.C Do Nascimento, Rafael O. De Sá, Paulo C. De A. Garcia

Biology Faculty Publications

The genus Edalorhina consists of two species of small forest-floor frogs inhabiting the Amazon basin. The tadpole of Edalorhina perezi, the most widely distributed species, was previously described based on a single and early stage (Gosner 25) individual. Herein, we provide a description of the tadpole in Gosner stages 35–36 including internal morphology data (i.e., buccopharyngeal cavity and larval skeleton) based on samples from two populations from Ecuador. Edalorhina shares a generalized morphology with most members of its closely related taxa; however, it is distinguished from the other species by having an almost terminal oral disc. The presence of …

An Annotated Atlas Of The Freshwater Fishes Of North Carolina, Bryn H. Tracy, Fred C. Rohde, Gabriela M. Hogue

Southeastern Fishes Council Proceedings

North Carolina’s first state-specific checklist of freshwater fish species was published in 1709 by John Lawson. Subsequent species lists with descriptions included: Brickell (1737), Cope (1870a), Jordan (1889a), Jordan and Evermann (1896-1900), Smith (1907), Jordan et al. (1930), Fowler (1945), Louder (1962), Ratledge et al. (1966), Menhinick et al. (1974). In 1991, Menhinick published “The Freshwater Fishes of North Carolina”, which is still widely in use because a comprehensive update has not been produced since its publication. The increase in the availability of historical records in globally accessible databases and the surge of collections post-1991 …

Red Lionfish (Pterois Volitans) Neurocranium, Matthew B. Edwards, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from a Lionfish (Pterois volitans) collected from whole foods supermarket on 11/9/2020

Protein Arginine Methyltransferase Prmt5 Regulates Fatty Acid Metabolism And Lipid Droplet Biogenesis In White Adipose Tissues, Zhihao Jia, Feng Yue, Xiyue Chen, Naagarajan Narayanan, Jiamin Qiu, Sabriya A. Syed, Anthony N. Imbalzano, Meng Deng, Peng Yu, Changdeng Hu, Shihuan Kuang

Purdue University Libraries Open Access Publishing Fund

The protein arginine methyltransferase 5 (PRMT5) is an emerging regulator of cancer and stem cells including adipogenic progenitors. Here, a new physiological role of PRMT5 in adipocytes and systemic metabolism is reported. Conditional knockout mice were generated to ablate the Prmt5 gene specifically in adipocytes (Prmt5AKO). The Prmt5AKO mice exhibit sex- and depot-dependent progressive lipodystrophy that is more pronounced in females and in visceral (than subcutaneous) white fat. The lipodystrophy and associated energy imbalance, hyperlipidemia, hepatic steatosis, glucose intolerance, and insulin resistance are exacerbated by high-fat-diet. Mechanistically, Prmt5 methylates and releases the transcription elongation factor SPT5 from Berardinelli-Seip congenital lipodystrophy …

Impact Of Mixed Biofilm Formation With Environmental Microorganisms On E. Coli O157:H7 Survival Against Sanitization, Sapna Chitlapilly Dass, Joseph M. Bosilevac, Maggie Weinroth, Christian Elowsky, You Zhou, Angela Anandappa, Rong Wang

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Biofilm formation by foodborne pathogens is a serious threat to food safety and public health. Meat processing plants may harbor various microorganisms and occasional foodborne pathogens; thus, the environmental microbial community might impact pathogen survival via mixed biofilm formation. We collected floor drain samples from two beef plants with different E. coli O157:H7 prevalence history and investigated the effects of the environmental microorganisms on pathogen sanitizer tolerance. The results showed that biofilm forming ability and bacterial species composition varied considerably based on the plants and drain locations. E. coli O157:H7 cells obtained significantly higher sanitizer tolerance in mixed biofilms by …

Two New Species Of Chiromachetes (Scorpiones: Hormuridae) From The Northern Western Ghats, India, Shauri Sulakhe, Shubhankar Deshpande, Nikhil Dandekar, Makarand Ketkar, Gaurang Gowande, Anand Padhye, Deshabhushan Bastawade

Euscorpius

Two new species of Chiromachetes Pocock, 1899 (Hormuridae) are described from the northern Western Ghats of India using an integrated taxonomic approach. Chiromachetes parakrami sp. n. and C. ramdasswamii sp. n. are closely related and differ from each other and C. sahyadriensis by morphological features and raw genetic divergence of 7.9–9.4 %.

Intake Of Supplemental Deer Pellets Containing Ground Blueberry Juniper By Wild Pigs, Jessica L. Glasscock, Travis R. Whitney, David G. Hewitt, Susan M. Cooper, Fred C. Bryant, Christina M. Toenjes

Human–Wildlife Interactions

Supplemental feeding of cervid species such as white-tailed deer (Odocoileus virginianus; deer) is now a common management practice in the United States. Supplemental feeding can be costly and more expensive when supplements are consumed by non-target species such as wild pigs (Sus scrofa; pigs). From May 13 to June 17, 2015, we evaluated the effects of using ground blueberry juniper (Juniperus ashei) or cottonseed (Gossypium spp.) hulls as a roughage ingredient in a supplemental deer pellet to deter pig consumption at the Texas A&M AgriLife Research Center in San Angelo, Texas, USA. We analyzed …

Escolar (Lepidocybium Flavobrunneum) Neurocranium, Meredith M. Pratt, Katerina D. Sawickij, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium prep of escolar Lepidocybium flavobrunneum obtained from longlining vessel.

Genomic Adaptations To Salinity Resist Gene Flow In The Evolution Of Floridian Watersnakes, Rhett M. Rautsaw, Tristan D. Schramer, Rachel Acuña, Lindsay N. Arick, Mark Dimeo, Kathryn P. Mercier, Michael Schrum, Andrew J. Mason, Mark J. Margres, Jason L. Strickland, Christopher L. Parkinson

Publications and Research

The migration-selection balance often governs the evolution of lineages, and speciation with gene flow is now considered common across the tree of life. Ecological speciation is a process that can facilitate divergence despite gene flow due to strong selective pressures caused by ecological differences; however, the exact traits under selection are often unknown. The transition from freshwater to saltwater habitats provides strong selection targeting traits with osmoregulatory function. Several lineages of North American watersnakes (Nerodia spp.) are known to occur in saltwater habitat and represent a useful system for studying speciation by providing an opportunity to investigate gene flow …

Effect Of Folic Acid Supplementation And Dietary Protein Level On Growth Performance, Serum Chemistry And Immune Response In Weanling Piglets Fed Differing Concentrations Of Aflatoxin, Ding Wang, Merlin D. Lindemann, Mark J. Estienne

Animal and Food Sciences Faculty Publications

Effects of folic acid and protein levels on growth and serum chemistry in pigs fed aflatoxin were determined in two experiments. Increasing aflatoxin (250 to 800 ppb) decreased (P < 0.05) weight gain and feed intake for both of the 35-day trials. In Experiment 1, increasing aflatoxin (0, 250, 500 ppb), increased linearly (P < 0.05) aspartate aminotransferase (AST), alkaline phosphatase (ALKP) and ɣ-glutamyl transferase (GGT). Folic acid (0, 2.0, 5.0, 12.5 ppm) increased linearly (P < 0.05) serum K, Ca, P, Mg, and AST with the largest effect observed at 12.5 ppm. Folic acid decreased (P < 0.05) blood urea nitrogen (BUN): creatinine and Na:K. In Experiment 2, aflatoxin (800 ppb) increased (P < 0.05) glucose and GGT, and decreased (P < 0.05) Na:K and albumin:globulin. Increasing protein from 15 to 18% elevated BUN: creatinine (P < 0.05), albumin: globulin (P < 0.05), albumin (P < 0.05) and ALKP (P < 0.05). Folic acid (2 ppm) elevated (P < 0.05) BUN, and interacted with both aflatoxin (P < 0.10) and protein (P < 0.05) on BUN. Adding folic acid to aflatoxin contaminated diets improved some measures of clinical chemistry in Experiment 1 but not traditional growth performance measures. The higher protein level reduced the effects of aflatoxicosis on growth.

The Life History And Population Dynamics Of Southern Flounder, Kenneth A. Erickson

LSU Master's Theses

Southern Flounder, Paralichthys lethostigma, are a coastal, estuarine-dependent flatfish species that inhabits the Southeastern US Atlantic Ocean and Gulf of Mexico. Throughout their range, Southern Flounder are exploited by both commercial and recreational fisheries. Recently, numerous sources have expressed concerns about Southern Flounder populations, with stock assessments indicating declines in spawning stock biomass and recruitment. To estimate life history traits needed for informed management, such as age, growth, and maturity, I collected 327 Southern Flounder from Louisiana and obtained 14,184 historical records from the Louisiana Department of Wildlife and Fisheries. Using a von Bertalanffy growth equation in a Bayesian …

Not Withering On The Evolutionary Vine: Systematic Revision Of The Brown Vine Snake (Reptilia: Squamata: Oxybelis) From Its Northern Distribution, Robert C. Jadin, Christopher Blair, Sarah A. Orlofske, Michael J. Jowers, Gilson A. Rivas, Laurie J. Vitt, Julie M. Ray, Eric N. Smith, John C. Murphy

Publications and Research

The genus Oxybelis currently is composed of four taxa despite numerous studies suggesting and describing multiple taxa within the O. aeneus complex. Here, we utilize a multilocus molecular dataset (i.e. cyt b, ND4, 12S, 16S, cmos, PRLR, 3663 bp) to conduct phylogenetic analyses to assess the evolutionary history of Oxybelis. Our molecular analyses find three major lineages of Oxybelis (i.e. O. aeneus complex, O. brevirostris, O. fulgidus complex) with a sister relationship between O. brevirostris and the O. aeneus complex to the exclusion of the O. fulgidus complex. More specifically, O. aeneus appears to harbor at least …

Influence Of Characteristics Of Marine Macroalgae On Feeding Preferences Of The Milkfish (Chanos Chanos) In Peninsular Malaysia, Lim Wai Yin

Student Works (2020-2029)

Herbivores can alter several ecological mechanisms including interactions between native and non-native autotrophs that may determine invasion success of the non-native autotrophs. This study looked into the autotroph-herbivore interactions in coastal marine ecosystems of Peninsular Malaysia, mainly to determine if autotroph nutritional components and geographical differences significantly influence herbivore feeding behaviours. The relative consumption rate (RCR) of milkfish (Chanos chanos Forsskål), a generalist herbivore obtained from the Straits of Malacca was documented through feeding trials using 12 macroalgal species collected from different coastal areas of the Straits of Malacca, the Straits of Johor, and the South China Sea. The herbivore …

Detection Of Organic Free Radicals And Reactive Oxygen Substances Using Chemically-Stimulated Luminescence From Structured Compound Semiconductors, William L. Boatright

Animal and Food Sciences Faculty Patents

A method of monitoring for the presence of an oxidizing chemical species in an aqueous or non-polar environment includes steps of exposing a structured compound semiconductor material to the oxidizing chemical species in the environment and detecting electromagnetic radiation emitted by the structured compound semiconductor material upon exposure to the oxidizing chemical species. The structured compound semiconductor material is a phytate scaffold material and a metal dopant.