Digital Commons Network^™

Small Grain Cereal Cover Crops For Late Fall Or Early Spring Grazing, Kallie J. Calus

Department of Animal Science: Dissertations, Theses, and Student Research

Beef cattle operations are confronted with early spring and late fall forage deficiencies. Producers in integrated crop and livestock systems can fill forage gaps using cover crops as a forage source in between cash crops.

A five-year study evaluating forage production, growing calf performance and economics of grazing an oats cover crop planted after corn silage (CS) and high moisture corn (HMC) corn harvests was conducted. The economic analysis accounted for costs of establishing and grazing the oats and the value of calf gain to determine fall grazing system profitability. Steers had greater average daily gain grazing oats after CS …

Management Of Late Summer Planted Annual Forages For Grazing And The Impacts Of Novel Sweet Bran Plus Products On Performance And Carcass Characteristics Of Beef Finishing Steers, Devin Anthony Jakub

Department of Animal Science: Dissertations, Theses, and Student Research

Two separate grazing studies were conducted to evaluate: 1) the effects of rapeseed inclusion into late summer planted oats on the performance of growing steers during late fall and winter (Exp. 1) and 2) the effects of forage allocation on forage utilization and performance of steers grazing a late summer planted oat-rapeseed mix (Exp. 2). Variation in the corn wet milling process can result in negative effects on animal performance, nonetheless, there remains interest in further exploration and refinement of corn wet milling byproducts to achieve optimal byproduct compositions and cattle performance. Thus, another experiment was conducted to evaluate the …

Impact Of Wood-Sourced Biochar On Carbon And Nitrogen Capture In Beef Feedlot Systems, Jessica L. Sperber

Department of Animal Science: Dissertations, Theses, and Student Research

A feedlot growing and finishing experiment evaluated the effect of including pine-sourced biochar at 0.8 (growing) and 1.0% (finishing) of dietary DM on steer performance, carcass characteristics, and greenhouse gas (GHG) production (Exp 1). Two nutrient mass balance experiments were conducted during winter and summer seasons to evaluate the effect of spreading unprocessed red cedar biochar on the feedlot pen surface on manure nutrient capture and cattle performance (Exp 2). In Exp. 1, the inclusion of biochar in the growing diet did not impact steer performance. The inclusion of biochar in the finishing diet significantly reduced intake and gain, resulting …

Utilizing Online Resources To Enhance Distribution Of Competitive Animal Evaluation Knowledge And Benefits, Brooke L. Parrish

Department of Animal Science: Dissertations, Theses, and Student Research

In recent years, the shift toward online education has revealed new challenges for learners to retain information, and for educators to find new and engaging ways to present content. This mixed methods, action research study explores the need and creation of online resources for competitive horse judging through surveys and pilot groups. The study was broken into four cycles. The first was an adult learner analysis survey, distributed through email Listservs and extension social media pages, to aid in answering the research questions: what expert horse judging instructors indicate their students should be learning, and what resources they need. Based …

Evaluation Of Cattle Management For Systems With Limited Perennial Pasture, Morgan Grabau

Department of Animal Science: Dissertations, Theses, and Student Research

Due to the conversion of perennial pasture and hay land to cropland in the western corn belt region, alternative methods of cow/calf management are being used to decrease reliance on perennial forages. These include grazing corn residue and feeding cow/calf pairs in confinement. Previous research has shown that limit-feeding a diet of low-quality forage and energy-dense co-products to cows in confinement is cost-effective. However, this strategy may limit the intake of the young calf and thus their performance. A study was conducted to evaluate the impacts of two alternative calf management strategies when pairs are in confinement, early weaning or …

Feeding A New Corn Milling Coproduct To Lactating Dairy Cattle: Examination Of Whole Animal Energy And Nitrogen Balance, Addison Lee Carroll

Department of Animal Science: Dissertations, Theses, and Student Research

New coproducts are continually developed in the ethanol production industry. With that, the new product originates from the dry milling process which is unlike the traditional process as nitrogenous based particles are concentrated from the residual fiber by sieving post fermentation. Although high protein coproducts have been available since the mid 2000’s. These new products must be evaluated for chemical composition so that they can be accurately described in feed libraries that are used in commercial ration formulation software. While chemical composition provides us an initial and useful description of a feed product, in vivo nitrogen and energy balance studies …

Host Genetics And Phenotype Associations Within The Bovine Rumen Microbiome, Waseem Abbas

Department of Animal Science: Dissertations, Theses, and Student Research

Rumen microbes have a symbiotic relationship with the host where the host provides a suitable environment and microbial fermentation fulfill nearly 70% of the energy needs of the host. Rumen microbes play a central role in host performance and health. To date, most rumen microbiome studies have focused on the influence of diet on microbial species composition. In addition to dietary factors, studies have suggested that host genetic markers could influence the colonization of gastrointestinal microbiota. However, our understanding of the host-microbiome interaction and how host phenotype is influenced by the rumen microbiome is limited. This dissertation demonstrates: (1) host …

The Dilemma Of Guinea Grass (Megathyrsus Maximus): A Valued Pasture Grass And A Highly Invasive Species, Aaron C. Rhodes, Robert M. Plowes, John A. Goolsby, John F. Gaskin, Boaz Musyoka, Paul André Calatayud, Massimo Cristofaro, Eric D. Grahmann, Dino J. Martins, Lawrence E. Gilbert

All Peer-Reviewed Publications

On a global scale, invasive grasses threaten biodiversity and ecosystem function. Nevertheless, the importation of forage grasses is a significant economic force driven by globalization. Pastureland and rangeland are of critical economic and ecological importance, but novel grass species may lead to invasion. Recognizing that economically important species can also be ecologically damaging creates a contentious debate for land managers, policymakers, and ecologists alike. Many Afrotropical perennial grass species have been intentionally introduced pantropically given their high forage production and resistance to stress. However, these traits may also confer competitive ability, increasing the possibility of unintended escape and invasion. Further, …

Development Of Comprehensive Theoretical Morphospaces For Canine Cranial Morphology, Alexa Ortega, Nicholas Hebdon, Lindsay Waldrop

Student Scholar Symposium Abstracts and Posters

Throughout the evolution of the family Canidae, there is a continuous belief that canines have an exceptional olfactory system which allows them to have a heightened sense of smell. Because of this olfactory sophistication, canines have become prevalent as detection animals in the military, homeland security, law enforcement, forensics, and civilian applications. However, while the trait is highly regarded, the exact role of nasal morphology is understudied. We aim to investigate the influences of nasal cavity and internal structure morphology in odor detection. However, nasal structure is a sophisticated morphological target and requires innovative solutions to capture the key variables …

Effect Of Cyclic Heat Stress On Feeding-Related Hypothalamic Neuropeptides Of Three Broiler Populations And Their Ancestor Jungle Fowl, Giorgio Brugaletta, Elizabeth S. Greene, Travis Tabler, Sara K. Orlowski, Federico Sirri, Sami Dridi

Poultry Science Faculty Publications and Presentations

Heat stress (HS) has been increasingly jeopardizing the sustainability of the poultry production. Moreover, modern high-performing chickens are far less able to withstand HS than their predecessors due to higher growth rate and metabolic rates. Performance losses caused by HS are mainly ascribed to decreases in feed consumption. Since feed intake is tightly controlled by the hypothalamic centers of hunger and satiety, we sought to determine the effect of chronic cyclic HS on the expression of feeding-related hypothalamic neuropeptides (FRHN) in unselected chickens (i.e., the ancestor junglefowl—JF) and three broiler lines from diverse stages of genetic selection (i.e., the slow …

Review: Physiological Growth Trend Of Current Meat Broilers And Dietary Protein And Energy Management Approaches For Sustainable Broiler Production, P. Maharjan, D. A. Martinez, J. Weil, N. Suesuttajit, C. Umberson, G. Mullenix, K. M. Hilton, A. Beitia, C. N. Coon

Poultry Science Faculty Publications and Presentations

The food production system needs to be sustainable including poultry sector to feed the increasing global population. An accepted economical and environmental approach of broiler production is to produce larger broilers faster while using less feed. Broiler production is aimed at producing consumable meat and meat products. The global broiler meat market has evolved over the years with increasing selection pressure shifted toward attaining yield characteristics for increased cut-up parts such as breast and thighs. There is a shift toward a big bird market in the U.S. with approximately 70% of the broiler meat produced from large birds (>2.72 …

Cattle Industry Funding Scheme Annual Report 2020/2021, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity published reports

In June 2010 the Cattle Industry Funding Scheme (IFS) was introduced to address biosecurity threats relevant to the Western Australian (WA) cattle industry. The Scheme was established under the Biosecurity and Agriculture Management Act 2007 to enable cattle producers to identify the pest and disease priorities at a whole-of-industry level and to raise funds for activities to address these priorities.

There are currently three Industry Funding Schemes in operation. In addition to the Cattle IFS, there is a Sheep and Goat IFS and a Grains, Seeds and Hay IFS. The three IFSs operate in a similar manner.

The purpose of …

Molecular Prevalence And Risk Factors Associated With Tick-Borne Pathogens In Cattle In Western Kenya, Tatenda Chiuya, Jandouwe Villinger, Daniel K. Masiga, Dickens O. Ondifu, Maurice K. Murungi, Lillian Wambua, Armanda D.S. Bastos, Eric M. Fèvre, Laura C. Falzon

All Peer-Reviewed Publications

Background: Tick-borne pathogens (TBPs) are of global importance, especially in sub-Saharan Africa where they represent a major constraint to livestock production. Their association with human disease is also increasingly recognized, signalling their zoonotic importance. It is therefore crucial to investigate TBPs prevalence in livestock populations and the factors associated with their presence. We set out to identify TBPs present in cattle and to determine associated risk factors in western Kenya, where smallholder livestock production is important for subsistence and market-driven income. Results: Tick-borne pathogen infections in blood samples collected from cattle at livestock markets and slaughterhouses between May 2017 and …

An Update On The Distribution Of Glossina (Tsetse Flies) At The Wildlife-Human-Livestock Interface Of Akagera National Park, Rwanda, Richard S. Gashururu, Samuel M. Githigia, Methode N. Gasana, Richard Habimana, Ndichu Maingi, Giuliano Cecchi, Massimo Paone, Weining Zhao, Daniel K. Masiga, James Gashumba

All Peer-Reviewed Publications

Background: Glossina (tsetse flies) biologically transmit trypanosomes that infect both humans and animals. Knowledge of their distribution patterns is a key element to better understand the transmission dynamics of trypanosomosis. Tsetse distribution in Rwanda has not been well enough documented, and little is known on their current distribution. This study determined the current spatial distribution, abundance, diversity, and seasonal variations of tsetse flies in and around the Akagera National Park. Methods: A longitudinal stratified sampling following the seasons was used. Biconical traps were deployed in 55 sites for 6 consecutive days of each study month from May 2018 to June …

Applying Behavioral And Physiological Measures To Assess The Relative Impact Of The Prolonged Covid-19 Pandemic Closure On Two Mammal Species At The Oregon Zoo: Cheetah (A. Jubatus) And Giraffe (G. C. Reticulata And G. C. Tippelskirchii), Laurel Fink, Candace D. Scarlata, Becca Vanbeek, Todd Bodner, Nadja C. Wielebnowski

Biology Faculty Publications and Presentations

The effect of visitor presence on zoo animals has been explored in numerous studies over the past two decades. However, the opportunities for observations without visitors have been very limited at most institutions. In 2020, the Oregon Zoo was closed, in response to the global SARSCoV-2 (COVID-19) pandemic, from 15 March 2020 to 12 July 2020, resulting in approximately four consecutive months without visitor presence. This study aimed to quantify potential behavioral and hormonal changes expressed during two transition periods in zoo visitor attendance: the initial time period before and after closure in March 2020 and time before and after …

Automatic Camera Trap Classification Using Wildlife-Specific Deep Learning In Nilgai Management, Matthew Kutugata, Jeremy Baumgardt, John A. Goolsby, Alexis Racelis

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Biology)

Camera traps provide a low-cost approach to collect data and monitor wildlife across large scales but hand-labeling images at a rate that outpaces accumulation is difficult. Deep learning, a subdiscipline of machine learning and computer science, has been shown to address the issue of automatically classifying camera trap images with a high degree of accuracy. This technique, however, may be less accessible to ecologists, to small scale conservation projects, and has serious limitations. In this study, a simple deep learning model was trained using a dataset of 120,000 images to identify the presence of nilgai Boselaphus tragocamelus, a regionally specific …

Serine/Threonine Protein Phosphatase 1-Α (Stpp1-Α) From Black Tiger Shrimp, Penaeus Monodon, An Immune-Related Gene, Jacqueline Marjorie Pereda, Neil Andrew Bascos, Mudjekeewis Santos

The Philippine Agricultural Scientist

Reversible protein phosphorylation is a significant regulatory mechanism in many cellular functions, such as the dephosphorylation of Serine/Threonine protein residues catalyzed by protein phosphatase. In this study, the full-length STPP1-α gene from Penaeus monodon was cloned, characterized, and analyzed for its constitutive expression in WSSV-negative P. monodon organs. The gene was originally an isotig isolated from the gills of P. monodon that survived WSSV infection. PmSTPP1-α gene (GenBank: KX385833) has a total of 2 171 bp, with a 990 open reading frame (ORF) that encodes 329 amino acids (aa), sharing a 93% sequence identity with human Serine/Threonine PP1-α …

Rearing Silver Therapon Leiopotherapon Plumbeus (Teleostei: Terapontidae) Larvae Using Euryhaline Rotifers As Starter Food, Frolan A. Aya, Vicar Stella Nillasca, Luis Maria B. Garcia

The Philippine Agricultural Scientist

The silver therapon Leiopotherapon plumbeus is an important but dwindling freshwater food commodity in the Philippine freshwater habitats. The influence of feeding regimes on growth performance and survival of first-feeding silver therapon larvae fed euryhaline rotifers (Brachionus rotundiformis and B. plicatilis) as starter food was examined. Larvae at two days post-hatch (DPH) (1.93 ± 0.07 mm; 200 larvae/basin) were initially reared on rotifers for 12 days followed by Artemia nauplii from 14 to 35 DPH as follows: (A) B. rotundiformis from 2-13 DPH; (B) B. rotundiformis from 2-7 DPH and Moina micrura from 8-13 DPH; and (C) B. …

Amphibians And Reptiles As Prey Of Heteroctenus Junceus (Scorpiones: Buthidae), With A Summary Of Vertebrate Predation By Scorpions In The West Indies, Tomás M. Rodríguez-Cabrera,, Ernesto Morell Savall, Rolando Teruel

Euscorpius

Vertebrate predation by scorpions has been scarcely documented in the literature. Contrary to large scorpions of the genera Centruroides, Hadrurus, Opistophthalmus, and Pandinurus from North America and Africa, which are capable of subduing even small rodents and bats, West Indian scorpions of the genera Centruroides, Heteroctenus, and Tityus seem to limit their prey to amphibians and reptiles. Herein we present new cases of a frog (Osteopilus septentrionalis; Hylidae) and three lizards (Anolis allisoni, A. ophiolepis, and A. sagrei; Dactyloidae) preyed upon by Heteroctenus junceus (Herbst, 1800), at the time we summarize all cases of vertebrate …

Diversity, Equity And Inclusion In Human-Animal Interaction, Nira Grynheim

Discovery Undergraduate Interdisciplinary Research Internship

No abstract provided.

Diversity, Equity And Inclusion In Human-Animal Interaction, Nira N. Grynheim, Clare E. Jensen, Marguerite L. O'Haire

Discovery Undergraduate Interdisciplinary Research Internship

Human-Animal Interaction (HAI) is a growing field investigating the complex relationships humans have with animals. Human diversity in HAI, or lack thereof, may have a direct influence on the way HAI data is interpreted and presented. Previous research has studied how apparent disability, racial, sexual or other diversifying identities might affect how humans interact with the world and their pets. However, thus far, there has been little research published on how inequitable barriers towards underrepresented minorities (URM) might play a role in how HAI is studied, interpreted and presented. The present study investigated human diversity among leaders in the HAI …

Tile Fish (Lopholatilus Villarii) Neurocranium, Maeya C. Yeatman, Sebastian K. Chan, David W. Kerstetter

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

Neurocranium from 12 cm total length (TL) Tile fish (Lopholatilus villarii), collected from Foodtown on 10/22/2021 by Maeya Yeatman and Sebastian Chan

Snook Neurocranium Scan Mello & Glanzmann, Christopher F. Glanzmann, Madison A. Mello

All Scans: Kerstetter Fisheries and Avian Ecology 3D Scan Series

This file is a 3D scan of a Snook Neurocranium. Snook head provided by DR. Kerstetter and scan performed by Chris Glanzmann and Madison Mello. Medium detail scan with a simplification ratio of 50.

How Do Genetic Relatedness And Spatial Proximity Shape African Swine Fever Infections In Wild Boar?, Tomasz Podgórski, Kim M. Pepin, Anna Radko, Angelika Podbielska, Magdalena Łyjak, Grzegorz Woźniakowski, Tomasz Borowik

United States Department of Agriculture Wildlife Services: Staff Publications

The importance of social and spatial structuring of wildlife populations for disease spread, though widely recognized, is still poorly understood in many host-pathogen systems. In particular, system-specific kin relationships among hosts can create contact heterogeneities and differential disease transmission rates. Here, we investigate how distance-dependent infection risk is influenced by genetic relatedness in a novel host-pathogen system: wild boar (Sus scrofa) and African swine fever (ASF).We hypothesized that infection risk would correlate positively with proximity and relatedness to ASF-infected individuals but expected those relationships to weaken with the distance between individuals due to decay in contact rates and …

Biomarkers For Resistance To Porcine Circovirus 2 Associated Disease, Daniel Constantin Ciobanu, Lianna Rayne Walker, Taylor Benjamin Engle, Hiep Vu

Department of Animal Science: Faculty Publications

The present disclosure provides compositions and methods for increasing resistance to PCV2 infection in pigs. The increased resistance may be the result of siRNA or genetic modification through CRISPR or a vectored virus targeting SNPs that are resistant to PCV2 infection.

Competition And Geography Underlie Speciation And Morphological Evolution In Indo-Australasian Monitor Lizards, Carlos J. Pavón-Vázquez, Ian G. Brennan, Alexander Skeels, J. Scott Keogh

Publications and Research

How biotic and abiotic factors act together to shape biological diversity is a major question in evolutionary biology. The recent availability of large datasets and development of new methodological approaches provide new tools to evaluate the predicted effects of ecological interactions and geography on lineage diversification and phenotypic evolution. Here, we use a near complete phylogenomic-scale phylogeny and a comprehensive morphological dataset comprising more than a thousand specimens to assess the role of biotic and abiotic processes in the diversification of monitor lizards (Varanidae). This charismatic group of lizards shows striking variation in species richness among its clades and multiple …

The Danov Archive, Victor Fet, Alexander Kogan

Open Access Books

This memorial volume compiles materials about Rostislav Dаnov (1941—1993) of St. Petersburg (Russia), a naturalist, artist, and snake-hunter, who worked for many years in Turkmenistan (West Kopetgagh Mts). The book celebrates Dаnov’s 80th birthday. It includes previously unpublished artwork and scientific illustrations by Dаnov as well as his texts, research papers, various memoirs, biographic information, and unique photographs. The book is intended for everyone who is interested in history of science and conservation in Central Asia and the USSR.

Фет В, Коган А, составители. Дановcкий архив. Библиотека Университета Маршалла, Хантингтон, Западная Виргиния, 2021. 494 с. Этот том содержит материалы о …

Considerations And Best Practices In Animal Science 16s Ribosomal Rna Gene Sequencing Microbiome Studies, Margaret D. Weinroth, Aeriel D. Belk, Chris Dean, Noelle Noyes, Dana K. Dittoe, Michael J. Rothrock Jr, Steven C. Ricke, Phillip R. Myer, Madison T. Henniger, Gustavo A. Ramírez, Brian B. Oakley, Katie Lynn Summers, Asha M. Miles, Taylor B. Ault-Seay, Zhongtang Yu, Jessica L. Metcalf, James E. Wells

Roman L. Hruska U.S. Meat Animal Research Center: Reports

Microbiome studies in animal science using 16S rRNA gene sequencing have become increasingly common in recent years as sequencing costs continue to fall and bioinformatic tools become more powerful and user-friendly. The combination of molecular biology, microbiology, microbial ecology, computer science, and bioinformatics—in addition to the traditional considerations when conducting an animal science study—makes microbiome studies sometimes intimidating due to the intersection of different fields. The objective of this review is to serve as a jumping-off point for those animal scientists less familiar with 16S rRNA gene sequencing and analyses and to bring up common issues and concerns that arise …

Classifying Mosquito Presence And Genera Using Median And Interquartile Values From 26-Filter Wingbeat Acoustic Properties, Hernan S. Alar, Proceso L. Fernandez Jr

Department of Information Systems & Computer Science Faculty Publications

Mosquitoes are known to be one of the deadliest creatures in the world. There have been several studies that aim to identify mosquito presence and species using various techniques. The most common ones involve automatic identification of mosquito species from the sounds produced by flapping its wings. The development of these important concepts and technologies can help reduce the spread of mosquito-borne diseases. This paper presents a simple model based on mean and interquartile values that aim to solve the mosquito classification. Despite its simplicity, the proposed model significantly outperforms a Convolutional Neural Network (CNN) model in identifying the mosquito …

Shifts In The Acute Stress Response In Red-Eared Sliders (Trachemys Scripta) During The Activity Season, Jennifer Lauren Terry

Student Theses and Dissertations

Tradeoffs may occur among biological processes if individuals are energetically challenged. Glucocorticoids (GC) promote essential daily processes and energy reprioritization during stressful or energy-demanding periods and provide insight to an individual’s energetic state. I captured 123 wild adult red-eared sliders (Trachemys scripta) outside of Cherry Valley, Arkansas in the Arkansas Delta between May and October 2019 to assess energy tradeoffs between innate immunity and GC secretion. I collected blood samples at 0–3, 30, and 60 min and used plasma in bacterial killing assays and radioimmunoassays to assess innate immunity and corticosterone concentrations, respectively. Tradeoffs were not evident in this population …