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Full-Text Articles in Physics
Aspects Of Stochastic Geometric Mechanics In Molecular Biophysics, David Frost
Aspects Of Stochastic Geometric Mechanics In Molecular Biophysics, David Frost
All Dissertations
In confocal single-molecule FRET experiments, the joint distribution of FRET efficiency and donor lifetime distribution can reveal underlying molecular conformational dynamics via deviation from their theoretical Forster relationship. This shift is referred to as a dynamic shift. In this study, we investigate the influence of the free energy landscape in protein conformational dynamics on the dynamic shift by simulation of the associated continuum reaction coordinate Langevin dynamics, yielding a deeper understanding of the dynamic and structural information in the joint FRET efficiency and donor lifetime distribution. We develop novel Langevin models for the dye linker dynamics, including rotational dynamics, based …
Hilbert Space Theory And Applications In Basic Quantum Mechanics, Matthew Gagne
Hilbert Space Theory And Applications In Basic Quantum Mechanics, Matthew Gagne
Mathematics
We explore the basic mathematical physics of quantum mechanics. Our primary focus will be on Hilbert space theory and applications as well as the theory of linear operators on Hilbert space. We show how Hermitian operators are used to represent quantum observables and investigate the spectrum of various linear operators. We discuss deviation and uncertainty and briefly suggest how symmetry and representations are involved in quantum theory.