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Physics Faculty Publications and Presentations

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Fluorescence

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Full-Text Articles in Physics

The Use Of Fluorescence Lifetime Imaging (Flim) For In Situ Microbial Detection In Complex Mineral Substrates, Yekaterina G. Chmykh, Jay Nadeau Jan 2024

The Use Of Fluorescence Lifetime Imaging (Flim) For In Situ Microbial Detection In Complex Mineral Substrates, Yekaterina G. Chmykh, Jay Nadeau

Physics Faculty Publications and Presentations

The utility of fluorescence lifetime imaging microscopy (FLIM) for identifying bacteria in complex mineral matrices was investigated. Baseline signals from unlabelled Bacillus subtilis and Euglena gracilis, and Bacillus subtilis labelled with SYTO 9 were obtained using two-photon excitation at 730, 750 and 800 nm, identifying characteristic lifetimes of photosynthetic pigments, unpigmented cellular autofluorescence, and SYTO 9. Labelled and unlabelled B. subtilis were seeded onto marble and gypsum samples containing endolithic photosynthetic cyanobacteria and the ability to distinguish cells from mineral autofluorescence and nonspecific dye staining was examined in parallel with ordinary multichannel confocal imaging. It was found that FLIM …


Nonlocal Electrodynamic Modeling Of Fluorescence Characteristics For Molecules In A Spherical Cavity, Pui T. Leung, M. H. Hider Nov 2002

Nonlocal Electrodynamic Modeling Of Fluorescence Characteristics For Molecules In A Spherical Cavity, Pui T. Leung, M. H. Hider

Physics Faculty Publications and Presentations

The emission characteristics for molecules in a spherical metallic microcavity are computed using a nonlocal electrodynamic model, based on a theory previously published by Fuchs and Claro [Phys. Rev. B 35, 3722 (1987)] for the multipole polarizability of a sphere. Both radially and tangentially oriented molecules at arbitrary locations inside the cavity are considered, and the results are compared with those from both the local response theory and those for molecules outside a spherical particle. The issue of reciprocity of the solutions for each of the sphere and cavity cases, respectively, is examined in the light of the nonlocal effects. …


Near-Field Fluorescence Microscopy Based On Two-Photon Excitation With Metal Tips, Erik J. Sánchez, Lukas Novotny, X. Sunney Xie May 1999

Near-Field Fluorescence Microscopy Based On Two-Photon Excitation With Metal Tips, Erik J. Sánchez, Lukas Novotny, X. Sunney Xie

Physics Faculty Publications and Presentations

We present a new scheme for near-field fluorescence imaging using a metal tip illuminated with femtosecond laser pulses of proper polarization. The strongly enhanced electric field at the metal tip (ap15 nm end diameter) results in a localized excitation source for molecular fluorescence. Excitation of the sample via two-photon absorption provides good image contrast due to the quadratic intensity dependence. The spatial resolution is shown to be better than that of the conventional aperture technique. We used the technique to image fragments of photosynthetic membranes, as well as j-aggregates with spatial resolutions on the order of 20 nm.


Molecular Fluorescence At A Rough Surface: The Orientation Effects, P.T. Leung, W. L. Blacke Nov 1997

Molecular Fluorescence At A Rough Surface: The Orientation Effects, P.T. Leung, W. L. Blacke

Physics Faculty Publications and Presentations

The problem of the dynamical interaction between an emitting dipole and a metallic grating surface is considered with particular interest in the effects due to different orientations of the dipole with respect to the substrate surface. Our previous perturbative theory is extended to treat both parallel and perpendicular dipoles and the results are applied to the study of modified fluorescence characteristics for admolecules in the vicinity of a rough metal surface modeled as a grating. Numerical results show that some of the characteristics are very sensitive to the molecular orientation and the one along the grating direction is manifested with …


Decay Of Molecules At Spherical Surfaces: Nonlocal Effects, P.T. Leung Apr 1990

Decay Of Molecules At Spherical Surfaces: Nonlocal Effects, P.T. Leung

Physics Faculty Publications and Presentations

The decay rates for molecules in the vicinity of a metallic sphere are investigated in a phenomenological approach for very close molecule-surface distances d. The Fuchs-Claro model [Phys. Rev. B 35, 3722 (1987)] is adopted to describe the polarizability of the sphere with the nonlocal dielectric response being accounted for within the hydrodynamic description. The results show significant differences when compared with those obtained previously within a local description for dlsim50 Aring, with extra resonances observed in the high-frequency regime, a phenomenon similar to that noted previously by Ruppin (1982), in his calculation of the extinction cross section for such …


Roughness-Induced Resonance For Molecular Fluorescence Near A Corrugated Metallic Surface, P.T. Leung, Young Sik Kim, Thomas F. George Nov 1988

Roughness-Induced Resonance For Molecular Fluorescence Near A Corrugated Metallic Surface, P.T. Leung, Young Sik Kim, Thomas F. George

Physics Faculty Publications and Presentations

Based on a dynamical energy-transfer theory for the molecular decay rate near a rough metallic surface, a new resonance structure is predicted which is mediated by the roughness and which is absent in the static image theory. The implication of this new resonance structure to other phenomena, such as electron-energy-loss spectrum and cross coupling in thin films, is pointed out.