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Occam Manual, Martin Zwick Jan 2021

Occam Manual, Martin Zwick

Systems Science Faculty Publications and Presentations

Occam is a Discrete Multivariate Modeling (DMM) tool based on the methodology of Reconstructability Analysis (RA). Its typical usage is for analysis of problems involving large numbers of discrete variables. Models are developed which consist of one or more components, which are then evaluated for their fit and statistical significance. Occam can search the lattice of all possible models, or can do detailed analysis on a specific model.

In Variable-Based Modeling (VBM), model components are collections of variables. In State-Based Modeling (SBM), components identify one or more specific states or substates.

Occam provides a web-based interface, which …


Joint Lattice Of Reconstructability Analysis And Bayesian Network General Graphs, Marcus Harris, Martin Zwick Jul 2020

Joint Lattice Of Reconstructability Analysis And Bayesian Network General Graphs, Marcus Harris, Martin Zwick

Systems Science Faculty Publications and Presentations

This paper integrates the structures considered in Reconstructability Analysis (RA) and those considered in Bayesian Networks (BN) into a joint lattice of probabilistic graphical models. This integration and associated lattice visualizations are done in this paper for four variables, but the approach can easily be expanded to more variables. The work builds on the RA work of Klir (1985), Krippendorff (1986), and Zwick (2001), and the BN work of Pearl (1985, 1987, 1988, 2000), Verma (1990), Heckerman (1994), Chickering (1995), Andersson (1997), and others. The RA four variable lattice and the BN four variable lattice partially overlap: there are ten …


Reconstructability Analysis & Its Occam Implementation, Martin Zwick Jul 2020

Reconstructability Analysis & Its Occam Implementation, Martin Zwick

Systems Science Faculty Publications and Presentations

This talk will describe Reconstructability Analysis (RA), a probabilistic graphical modeling methodology deriving from the 1960s work of Ross Ashby and developed in the systems community in the 1980s and afterwards. RA, based on information theory and graph theory, resembles and partially overlaps Bayesian networks (BN) and log-linear techniques, but also has some unique capabilities. (A paper explaining the relationship between RA and BN will be given in this special session.) RA is designed for exploratory modeling although it can also be used for confirmatory hypothesis testing. In RA modeling, one either predicts some DV from a set of IVs …


Enhancing Value-Based Healthcare With Reconstructability Analysis: Predicting Cost Of Care In Total Hip Replacement, Cecily Corrine Froemke, Martin Zwick Nov 2018

Enhancing Value-Based Healthcare With Reconstructability Analysis: Predicting Cost Of Care In Total Hip Replacement, Cecily Corrine Froemke, Martin Zwick

Systems Science Faculty Publications and Presentations

Legislative reforms aimed at slowing growth of US healthcare costs are focused on achieving greater value per dollar. To increase value healthcare providers must not only provide high quality care, but deliver this care at a sustainable cost. Predicting risks that may lead to poor outcomes and higher costs enable providers to augment decision making for optimizing patient care and inform the risk stratification necessary in emerging reimbursement models. Healthcare delivery systems are looking at their high volume service lines and identifying variation in cost and outcomes in order to determine the patient factors that are driving this variation and …


Preliminary Results Of Bayesian Networks And Reconstructability Analysis Applied To The Electric Grid, Marcus Harris, Martin Zwick Jul 2018

Preliminary Results Of Bayesian Networks And Reconstructability Analysis Applied To The Electric Grid, Marcus Harris, Martin Zwick

Systems Science Faculty Publications and Presentations

Reconstructability Analysis (RA) is an analytical approach developed in the systems community that combines graph theory and information theory. Graph theory provides the structure of relations (model of the data) between variables and information theory characterizes the strength and the nature of the relations. RA has three primary approaches to model data: variable based (VB) models without loops (acyclic graphs), VB models with loops (cyclic graphs) and state-based models (nearly always cyclic, individual states specifying model constraints). These models can either be directed or neutral. Directed models focus on a single response variable whereas neutral models focus on all relations …


Reconstructability & Dynamics Of Elementary Cellular Automata, Martin Zwick Jul 2018

Reconstructability & Dynamics Of Elementary Cellular Automata, Martin Zwick

Systems Science Faculty Publications and Presentations

Reconstructability analysis (RA) is a method to determine whether a multivariate relation, defined set- or information-theoretically, is decomposable with or without loss into lower ordinality relations. Set-theoretic RA (SRA) is used to characterize the mappings of elementary cellular automata. The decomposition possible for each mapping w/o loss is a better predictor than the λ parameter (Walker & Ashby, Langton) of chaos, & non-decomposable mappings tend to produce chaos. SRA yields not only the simplest lossless structure but also a vector of losses for all structures, indexed by parameter τ. These losses are analogous to transmissions in information-theoretic RA (IRA). IRA …


Introduction To Reconstructability Analysis, Martin Zwick Jul 2018

Introduction To Reconstructability Analysis, Martin Zwick

Systems Science Faculty Publications and Presentations

This talk will introduce Reconstructability Analysis (RA), a data modeling methodology deriving from the 1960s work of Ross Ashby and developed in the systems community in the 1980s and afterwards. RA, based on information theory and graph theory, is a member of the family of methods known as ‘graphical models,’ which also include Bayesian networks and log-linear techniques. It is designed for exploratory modeling, although it can also be used for confirmatory hypothesis testing. RA can discover high ordinality and nonlinear interactions that are not hypothesized in advance. Its conceptual framework illuminates the relationships between wholes and parts, a subject …


Beyond Spatial Autocorrelation: A Novel Approach Using Reconstructability Analysis, David Percy, Martin Zwick Jul 2018

Beyond Spatial Autocorrelation: A Novel Approach Using Reconstructability Analysis, David Percy, Martin Zwick

Systems Science Faculty Publications and Presentations

Raster data are digital representations of spatial phenomena that are organized into rows and columns that typically have the same dimensions in each direction. They are used to represent image data at any scale. Common raster data are medical images, satellite data, and photos generated by modern smartphones.
Satellites capture reflectance data in specific bands of wavelength that correspond to red, green, blue, and often some infrared and thermal bands. These composite vectors can then be classified into actual land use categories such as forest or water using automated techniques. These classifications are verified on the ground using hand-held sensors. …


Statistical Analysis Of Network Change, Teresa D. Schmidt, Martin Zwick Feb 2018

Statistical Analysis Of Network Change, Teresa D. Schmidt, Martin Zwick

Systems Science Faculty Publications and Presentations

Networks are rarely subjected to hypothesis tests for difference, but when they are inferred from datasets of independent observations statistical testing is feasible. To demonstrate, a healthcare provider network is tested for significant change after an intervention using Medicaid claims data. First, the network is inferred for each time period with (1) partial least squares (PLS) regression and (2) reconstructability analysis (RA). Second, network distance (i.e., change between time periods) is measured as the mean absolute difference in (1) coefficient matrices for PLS and (2) calculated probability distributions for RA. Third, the network distance is compared against a reference distribution …


Logic -> Proof -> Rest, Maxwell Taylor Jan 2018

Logic -> Proof -> Rest, Maxwell Taylor

Senior Independent Study Theses

REST is a common architecture for networked applications. Applications that adhere to the REST constraints enjoy significant scaling advantages over other architectures. But REST is not a panacea for the task of building correct software. Algebraic models of computation, particularly CSP, prove useful to describe the composition of applications using REST. CSP enables us to describe and verify the behavior of RESTful systems. The descriptions of each component can be used independently to verify that a system behaves as expected. This thesis demonstrates and develops CSP methodology to verify the behavior of RESTful applications.


Ideas & Graphs, Martin Zwick Oct 2017

Ideas & Graphs, Martin Zwick

Systems Science Faculty Publications and Presentations

A graph can specify the skeletal structure of an idea, onto which meaning can be added by interpreting the structure.

This paper considers graphs (but not hypergraphs) consisting of four nodes, and suggests meanings that can be associated with several different directed and undirected graphs.

Drawing on Bennett's "systematics," specifically on the Tetrad that systematics offers as a model of 'activity,' the analysis here shows that the Tetrad is versatile model of problem-solving, regulation and control, and other processes.


Morphogrammatics Of Reflection, Rudolf Kaehr Nov 2010

Morphogrammatics Of Reflection, Rudolf Kaehr

Rudolf Kaehr

Turning back from the studies of morphogrammatics to some open questions of reflectional programming, the recountered problematics might be put into a different light and new methods of handling formal aspects of reflection and reflectionality shall be introduced. Albeit the use of light-metaphors, morphogrammatic reflection is not sketched along the paradigm of optical metaphors. Morphograms are presenting neither propositions nor perceptions able for mirroring (representation). Exercises in defining morphogrammatic retro-grade recursion and reflection schemata are continued from the paper “Sketches to Morphogrammatic Programming”.


Memristics: Memristors, Again? – Part Ii, How To Transform Wired ‘Translations’ Between Crossbars Into Interactions?, Rudolf Kaehr Apr 2010

Memristics: Memristors, Again? – Part Ii, How To Transform Wired ‘Translations’ Between Crossbars Into Interactions?, Rudolf Kaehr

Rudolf Kaehr

The idea behind this patchwork of conceptual interventions is to show the possibility of a “buffer-free” modeling of the crossbar architecture for memristive systems on the base of a purely difference-theoretical approach. It is considered that on a nano-electronic level principles of interpretation appears as mechanisms of complementarity. The most basic conceptual approach to such a complementarity is introduced as an interchangeability of operators and operands of an operation. Therefore, the architecture of crossbars gets an interpretation as complementarity between crossbar functionality and “buffering” translation functionality. That is, the same matter functions as operator and at once, as operand – …


Memristics: Memristors, Again?, Rudolf Kaehr Apr 2010

Memristics: Memristors, Again?, Rudolf Kaehr

Rudolf Kaehr

This collection gives first and short critical reflections on the concepts of memristics, memristors and memristive systems and the history of similar movements with an own focus on a possible interplay between memory and computing functions, at once, at the same place and time, to achieve a new kind of complementarity between computation and memory on a single chip without retarding buffering conditions.


Sketch Of A Typology Of Abstract Memristic Machines, Rudolf Kaehr Jan 2010

Sketch Of A Typology Of Abstract Memristic Machines, Rudolf Kaehr

Rudolf Kaehr

A typology of memristic machines is sketched. This sketch gives an overview and orientation to the paper “Towards Abstract Memristic Machines”. It also intents to propose a concise systematization of the newly introduced terms and strategies to memristics and morphogrammatics. This sketch is introducing four types of sign-use for four types of machines of fundamentally different paradigms: 1. semiotic, 2. monomorphic, 3. polymorphic and 4. bisimilar abstract machines. Further definitions of abstract machines have to be based on those graphematic notational systems. A realization of such constructions of abstract machines, in contrast to existing abstract machines of the theory of …


Towards Abstract Memristic Machines, Rudolf Kaehr Jan 2010

Towards Abstract Memristic Machines, Rudolf Kaehr

Rudolf Kaehr

No abstract provided.


From Universe To Polyverses, Rudolf Kaehr Jan 2010

From Universe To Polyverses, Rudolf Kaehr

Rudolf Kaehr

Some thoughts about the power of speculation behind important discoveries in mathematics, physics and computer science. The exercise shows that there is no need for a compulsory ultimate unifying universe. It is speculated that just this paradigm of a single ultimate universe is unmasking itself today as the main obstacle for further development in Western science and technology.


Morphogrammatics For Dummies: The Domino Approach, Rudolf Kaehr Jan 2010

Morphogrammatics For Dummies: The Domino Approach, Rudolf Kaehr

Rudolf Kaehr

Dominoes, morphograms, cellular automata, memristics. Topics: possible continuation, coalitions, cooperations, substitution, morphic bisimilarity.


The Logic Of Bailout Strategies, Rudolf Kaehr Jan 2009

The Logic Of Bailout Strategies, Rudolf Kaehr

Rudolf Kaehr

Some thoughts about/of the logic, blend, chiasm and diamond of bailout strategies. Eliciting aspects of the maxim: “Without insurrection, no resurrection".


Diamond Semiotic Short Studies, Rudolf Kaehr Jan 2009

Diamond Semiotic Short Studies, Rudolf Kaehr

Rudolf Kaehr

A collection of papers on semiotics, polycontexturality and diamond theory


Diamond Theory Collections. A Collection Of Papers And Fragments Towards Diamond Theory 2007-2009, Rudolf Kaehr Dec 2008

Diamond Theory Collections. A Collection Of Papers And Fragments Towards Diamond Theory 2007-2009, Rudolf Kaehr

Rudolf Kaehr

No abstract provided.


Double Cross Playing Diamonds, Rudolf Kaehr Jan 2008

Double Cross Playing Diamonds, Rudolf Kaehr

Rudolf Kaehr

Understanding interactivity in/between bigraphs and diamonds Grammatologically, the Western notational system is not offering space in itself to place sameness and otherness necessary to realize interaction/ality. Alphabetism is not prepared to challenge the dynamics of interaction directly. The Chinese writing system in its scriptural structuration, is able to place complex differences into itself, necessary for the development and design of formal systems and programming languages of interaction. The challenge of interactionality to Western thinking, modeling and design interactivity has to be confronted with the decline of the scientific power of alpha-numeric notational systems as media of living in a complex …


Short Studies 2008. Adventures In Diamond Strategies Of Change(S), Rudolf Kaehr Jan 2008

Short Studies 2008. Adventures In Diamond Strategies Of Change(S), Rudolf Kaehr

Rudolf Kaehr

Modular Bolognese Paradoxes of postmodern education. A Tale of Fishes, Birds and Diamonds in Second-Order Epistemology Why it is useless to write about the mono-contexturality of alphabetism and digitalism Chez Maxime's Human rights in a polycontextural world Primary Thoughts to a Manifesto for Awareness Fashion Marketing Which Equality? How equal are equal human beings? Generalized Diamonds From monosemic to tectonic complementarity Diamond Disremption Diamond interpretation of the kenomic succession operation Diamond Web2.0? How social is social networking? Web Mobility Web computing between semiotic and kenomic spaces Double Cross Playing Diamonds Understanding interactivity in/between bigraphs and diamonds Morphogrammatics of Change A …


Actors, Objects, Contextures, Morphograms, Rudolf Kaehr Jan 2007

Actors, Objects, Contextures, Morphograms, Rudolf Kaehr

Rudolf Kaehr

Systematic and historic overview and critics of actor and object oriented programming.


From Dialogues To Polylogues, Rudolf Kaehr Jan 2007

From Dialogues To Polylogues, Rudolf Kaehr

Rudolf Kaehr

No abstract provided.


The Abacus Of Universal Logics, Rudolf Kaehr Dec 2006

The Abacus Of Universal Logics, Rudolf Kaehr

Rudolf Kaehr

No abstract provided.


Place-Valued Logics Around Cybernetic Ontology, The Bcl And Afosr, Rudolf Kaehr Jan 2006

Place-Valued Logics Around Cybernetic Ontology, The Bcl And Afosr, Rudolf Kaehr

Rudolf Kaehr

No abstract provided.


From Ruby To Rudy, Rudolf Kaehr Jan 2006

From Ruby To Rudy, Rudolf Kaehr

Rudolf Kaehr

No abstract provided.


The Chinese Challenge. Hallucinations For Other Futures, Rudolf Kaehr Jan 2006

The Chinese Challenge. Hallucinations For Other Futures, Rudolf Kaehr

Rudolf Kaehr

The main question is: What can we learn from China that China is not teaching us? It is proposed that a study of polycontextural logic and morphogrammatics could be helpful to discover this new kind of rationality.


Application Of Information-Theoretic Data Mining Techniques In A National Ambulatory Practice Outcomes Research Network, Adam Wright, Thomas N. Ricciardi, Martin Zwick Oct 2005

Application Of Information-Theoretic Data Mining Techniques In A National Ambulatory Practice Outcomes Research Network, Adam Wright, Thomas N. Ricciardi, Martin Zwick

Systems Science Faculty Publications and Presentations

The Medical Quality Improvement Consortium data warehouse contains de-identified data on more than 3.6 million patients including their problem lists, test results, procedures and medication lists. This study uses reconstructability analysis, an information-theoretic data mining technique, on the MQIC data warehouse to empirically identify risk factors for various complications of diabetes including myocardial infarction and microalbuminuria. The risk factors identified match those risk factors identified in the literature, demonstrating the utility of the MQIC data warehouse for outcomes research, and RA as a technique for mining clinical data warehouses.