Data Science Commons^™

Machine Learning Methods For Depression Detection Using Smri And Rs-Fmri Images, Marzieh Sadat Mousavian

LSU Doctoral Dissertations

Major Depression Disorder (MDD) is a common disease throughout the world that negatively influences people’s lives. Early diagnosis of MDD is beneficial, so detecting practical biomarkers would aid clinicians in the diagnosis of MDD. Having an automated method to find biomarkers for MDD is helpful even though it is difficult. The main aim of this research is to generate a method for detecting discriminative features for MDD diagnosis based on Magnetic Resonance Imaging (MRI) data.

In this research, representational similarity analysis provides a framework to compare distributed patterns and obtain the similarity/dissimilarity of brain regions. Regions are obtained by either …

Convolutional Audio Source Separation Applied To Drum Signal Separation, Marius Orehovschi

Honors Theses

This study examined the task of drum signal separation from full music mixes via both classical methods (Independent Component Analysis) and a combination of Time-Frequency Binary Masking and Convolutional Neural Networks. The results indicate that classical methods relying on predefined computations do not achieve any meaningful results, while convolutional neural networks can achieve imperfect but musically useful results. Furthermore, neural network performance can be improved by data augmentation via transposition – a technique that can only be applied in the context of drum signal separation.

Ensemble Protein Inference Evaluation, Kyle Lee Lucke

Graduate Student Theses, Dissertations, & Professional Papers

The Protein inference problem is becoming an increasingly important tool that aids in the characterization of complex proteomes and analysis of complex protein samples. In bottom-up shotgun proteomics experiments the metrics for evaluation (like AUC and calibration error) are based on an often imperfect target-decoy database. These metrics make the inherent assumption that all of the proteins in the target set are present in the sample being analyzed. In general, this is not the case, they are typically a mix of present and absent proteins. To objectively evaluate inference methods, protein standard datasets are used. These datasets are special in …

Learning From Multi-Class Imbalanced Big Data With Apache Spark, William C. Sleeman Iv

Theses and Dissertations

With data becoming a new form of currency, its analysis has become a top priority in both academia and industry, furthering advancements in high-performance computing and machine learning. However, these large, real-world datasets come with additional complications such as noise and class overlap. Problems are magnified when with multi-class data is presented, especially since many of the popular algorithms were originally designed for binary data. Another challenge arises when the number of examples are not evenly distributed across all classes in a dataset. This often causes classifiers to favor the majority class over the minority classes, leading to undesirable results …

Identification And Classification Of Radio Pulsar Signals Using Machine Learning, Di Pang

Graduate Theses, Dissertations, and Problem Reports

Automated single-pulse search approaches are necessary as ever-increasing amount of observed data makes the manual inspection impractical. Detecting radio pulsars using single-pulse searches, however, is a challenging problem for machine learning because pul- sar signals often vary significantly in brightness, width, and shape and are only detected in a small fraction of observed data.

The research work presented in this dissertation is focused on development of ma- chine learning algorithms and approaches for single-pulse searches in the time domain. Specifically, (1) We developed a two-stage single-pulse search approach, named Single- Pulse Event Group IDentification (SPEGID), which automatically identifies and clas- …

Revisiting Absolute Pose Regression, Hunter Blanton

Theses and Dissertations--Computer Science

Images provide direct evidence for the position and orientation of the camera in space, known as camera pose. Traditionally, the problem of estimating the camera pose requires reference data for determining image correspondence and leveraging geometric relationships between features in the image. Recent advances in deep learning have led to a new class of methods that regress the pose directly from a single image.

This thesis proposes methods for absolute camera pose regression. Absolute pose regression estimates the pose of a camera from a single image as the output of a fixed computation pipeline. These methods have many practical benefits …

Reliable And Interpretable Machine Learning For Modeling Physical And Cyber Systems, Daniel L. Marino Lizarazo

Theses and Dissertations

Over the past decade, Machine Learning (ML) research has predominantly focused on building extremely complex models in order to improve predictive performance. The idea was that performance can be improved by adding complexity to the models. This approach proved to be successful in creating models that can approximate highly complex relationships while taking advantage of large datasets. However, this approach led to extremely complex black-box models that lack reliability and are difficult to interpret. By lack of reliability, we specifically refer to the lack of consistent (unpredictable) behavior in situations outside the training data. Lack of interpretability refers to the …

Information Architecture For A Chemical Modeling Knowledge Graph, Adam R. Luxon

Theses and Dissertations

Machine learning models for chemical property predictions are high dimension design challenges spanning multiple disciplines. Free and open-source software libraries have streamlined the model implementation process, but the design complexity remains. In order better navigate and understand the machine learning design space, model information needs to be organized and contextualized. In this work, instances of chemical property models and their associated parameters were stored in a Neo4j property graph database. Machine learning model instances were created with permutations of dataset, learning algorithm, molecular featurization, data scaling, data splitting, hyperparameters, and hyperparameter optimization techniques. The resulting graph contains over 83,000 nodes …

Binary Black Widow Optimization Algorithm For Feature Selection Problems, Ahmed Al-Saedi

Theses and Dissertations (Comprehensive)

This thesis addresses feature selection (FS) problems, which is a primary stage in data mining. FS is a significant pre-processing stage to enhance the performance of the process with regards to computation cost and accuracy to offer a better comprehension of stored data by removing the unnecessary and irrelevant features from the basic dataset. However, because of the size of the problem, FS is known to be very challenging and has been classified as an NP-hard problem. Traditional methods can only be used to solve small problems. Therefore, metaheuristic algorithms (MAs) are becoming powerful methods for addressing the FS problems. …

Inference Of Surface Velocities From Oblique Time Lapse Photos And Terrestrial Based Lidar At The Helheim Glacier, Franklyn T. Dunbar Ii

Graduate Student Theses, Dissertations, & Professional Papers

Using time dependent observations derived from terrestrial LiDAR and oblique
time-lapse imagery, we demonstrate that a Bayesian approach to glacial motion es-
timation provides a concise way to incorporate multiple data products into a single
motion estimation procedure effectively producing surface velocity estimates with
an associated uncertainty. This approach brings both improved computational effi-
ciency, and greater scalability across observational time-frames when compared to
existing methods. To gauge efficacy, we apply these methods to a set of observa-
tions from the Helheim Glacier, a critical actor in contemporary mass loss trends
observed in the Greenland Ice Sheet. We find that …

Hierarchical Aggregation Of Multidimensional Data For Efficient Data Mining, Safaa Khalil Alwajidi

Dissertations

Big data analysis is essential for many smart applications in areas such as connected healthcare, intelligent transportation, human activity recognition, environment, and climate change monitoring. Traditional data mining algorithms do not scale well to big data due to the enormous number of data points and the velocity of their generation. Mining and learning from big data need time and memory efficiency techniques, albeit the cost of possible loss in accuracy. This research focuses on the mining of big data using aggregated data as input. We developed a data structure that is to be used to aggregate data at multiple resolutions. …

Using Data Analytics To Predict Students Score, Nang Laik Ma, Gim Hong Chua

Research Collection School Of Computing and Information Systems

Education is very important to Singapore, and the government has continued to invest heavily in our education system to become one of the world-class systems today. A strong foundation of Science, Technology, Engineering, and Mathematics (STEM) was what underpinned Singapore's development over the past 50 years. PISA is a triennial international survey that evaluates education systems worldwide by testing the skills and knowledge of 15-year-old students who are nearing the end of compulsory education. In this paper, the authors used the PISA data from 2012 and 2015 and developed machine learning techniques to predictive the students' scores and understand the …

European Floating Strike Lookback Options: Alpha Prediction And Generation Using Unsupervised Learning, Tristan Lim, Aldy Gunawan, Chin Sin Ong

Research Collection School Of Computing and Information Systems

This research utilized the intrinsic quality of European floating strike lookback call options, alongside selected return and volatility parameters, in a K-means clustering environment, to recommend an alpha generative trading strategy. The result is an elegant easy-to-use alpha strategy based on the option mechanisms which identifies investment assets with high degree of significance. In an upward trending market, the research had identified European floating strike lookback call option as an evaluative criterion and investable asset, which would both allow investors to predict and profit from alpha opportunities. The findings will be useful for (i) buy-side investors seeking alpha generation and/or …

Applications Of Artificial Intelligence And Graphy Theory To Cyberbullying, Jesse D. Simpson

MSU Graduate Theses

Cyberbullying is an ongoing and devastating issue in today's online social media. Abusive users engage in cyber-harassment by utilizing social media to send posts, private messages, tweets, or pictures to innocent social media users. Detecting and preventing cases of cyberbullying is crucial. In this work, I analyze multiple machine learning, deep learning, and graph analysis algorithms and explore their applicability and performance in pursuit of a robust system for detecting cyberbullying. First, I evaluate the performance of the machine learning algorithms Support Vector Machine, Naïve Bayes, Random Forest, Decision Tree, and Logistic Regression. This yielded positive results and obtained upwards …

Pathways To The Native Storyteller: A Method To Enable Computational Story Understanding, Aramide O. Kehinde

College of Computing and Digital Media Dissertations

The primary objective of this thesis is to develop a method that uses machine learning algorithms to enable computational story understanding. This research is conducted with the aim of establishing a system called the Native Storyteller that plans and creates storytelling experiences for human users. The paper first establishes the desired capabilities of the system and then deep dives into how to enable story understanding, which is the core ability the system needs to function. As such, the research places emphasis on natural language processing and its application to solving key problems in this context. Namely, machine representation of story …

Development Of Fully Balanced Ssfp And Computer Vision Applications For Mri-Assisted Radiosurgery (Mars), Jeremiah Sanders

Dissertations & Theses (Open Access)

Prostate cancer is the second most common cancer in men and the second-leading cause of cancer death in men. Brachytherapy is a highly effective treatment option for prostate cancer, and is the most cost-effective initial treatment among all other therapeutic options for low to intermediate risk patients of prostate cancer. In low-dose-rate (LDR) brachytherapy, verifying the location of the radioactive seeds within the prostate and in relation to critical normal structures after seed implantation is essential to ensuring positive treatment outcomes.

One current gap in knowledge is how to simultaneously image the prostate, surrounding anatomy, and radioactive seeds within the …

Algorithm Selection Framework: A Holistic Approach To The Algorithm Selection Problem, Marc W. Chalé

Theses and Dissertations

A holistic approach to the algorithm selection problem is presented. The “algorithm selection framework" uses a combination of user input and meta-data to streamline the algorithm selection for any data analysis task. The framework removes the conjecture of the common trial and error strategy and generates a preference ranked list of recommended analysis techniques. The framework is performed on nine analysis problems. Each of the recommended analysis techniques are implemented on the corresponding data sets. Algorithm performance is assessed using the primary metric of recall and the secondary metric of run time. In six of the problems, the recall of …

A Systematic Literature Survey Of Unmanned Aerial Vehicle Based Structural Health Monitoring, Sreehari Sreenath

Theses, Dissertations and Capstones

Unmanned Aerial Vehicles (UAVs) are being employed in a multitude of civil applications owing to their ease of use, low maintenance, affordability, high-mobility, and ability to hover. UAVs are being utilized for real-time monitoring of road traffic, providing wireless coverage, remote sensing, search and rescue operations, delivery of goods, security and surveillance, precision agriculture, and civil infrastructure inspection. They are the next big revolution in technology and civil infrastructure, and it is expected to dominate more than $45 billion market value. The thesis surveys the UAV assisted Structural Health Monitoring or SHM literature over the last decade and categorize UAVs …

Disaster Damage Categorization Applying Satellite Images And Machine Learning Algorithm, Farinaz Sabz Ali Pour, Adrian Gheorghe

Engineering Management & Systems Engineering Faculty Publications

Special information has a significant role in disaster management. Land cover mapping can detect short- and long-term changes and monitor the vulnerable habitats. It is an effective evaluation to be included in the disaster management system to protect the conservation areas. The critical visual and statistical information presented to the decision-makers can help in mitigation or adaption before crossing a threshold. This paper aims to contribute in the academic and the practice aspects by offering a potential solution to enhance the disaster data source effectiveness. The key research question that the authors try to answer in this paper is how …

Modelling Interleaved Activities Using Language Models, Eoin Rogers, Robert J. Ross, John D. Kelleher

Conference papers

We propose a new approach to activity discovery, based on the neural language modelling of streaming sensor events. Our approach proceeds in multiple stages: we build binary links between activities using probability distributions generated by a neural language model trained on the dataset, and combine the binary links to produce complex activities. We then use the activities as sensor events, allowing us to build complex hierarchies of activities. We put an emphasis on dealing with interleaving, which represents a major challenge for many existing activity discovery systems. The system is tested on a realistic dataset, demonstrating it as a promising …

Cooperative Co-Evolution For Feature Selection In Big Data With Random Feature Grouping, A.N.M. Bazlur Rashid, Mohiuddin Ahmed, Leslie F. Sikos, Paul Haskell-Dowland

Research outputs 2014 to 2021

© 2020, The Author(s). A massive amount of data is generated with the evolution of modern technologies. This high-throughput data generation results in Big Data, which consist of many features (attributes). However, irrelevant features may degrade the classification performance of machine learning (ML) algorithms. Feature selection (FS) is a technique used to select a subset of relevant features that represent the dataset. Evolutionary algorithms (EAs) are widely used search strategies in this domain. A variant of EAs, called cooperative co-evolution (CC), which uses a divide-and-conquer approach, is a good choice for optimization problems. The existing solutions have poor performance because …

Statistical Machine Learning Methods For Mining Spatial And Temporal Data, Fei Tan

Dissertations

Spatial and temporal dependencies are ubiquitous properties of data in numerous domains. The popularity of spatial and temporal data mining has thus grown with the increasing prevalence of massive data. The presence of spatial and temporal attributes not only provides complementary useful perspectives, but also poses new challenges to the representation and integration into the learning procedure. In this dissertation, the involved spatial and temporal dependencies are explored with three genres: sample-wise, feature-wise, and target-wise. A family of novel methodologies is developed accordingly for the dependency representation in respective scenarios.

First, dependencies among discrete, continuous and repeated observations are studied …

Watersheds For Semi-Supervised Classification, Aditya Challa, Sravan Danda, B. S.Daya Sagar, Laurent Najman

Journal Articles

Watershed technique from mathematical morphology (MM) is one of the most widely used operators for image segmentation. Recently watersheds are adapted to edge weighted graphs, allowing for wider applicability. However, a few questions remain to be answered - How do the boundaries of the watershed operator behave? Which loss function does the watershed operator optimize? How does watershed operator relate with existing ideas from machine learning. In this letter, a framework is developed, which allows one to answer these questions. This is achieved by generalizing the maximum margin principle to maximum margin partition and proposing a generic solution, morphMedian, resulting …

Constructing Interactive Visual Classification, Clustering And Dimension Reduction Models For N-D Data, Boris Kovalerchuk, Dmytro Dovhalets

Computer Science Faculty Scholarship

The exploration of multidimensional datasets of all possible sizes and dimensions is a long-standing challenge in knowledge discovery, machine learning, and visualization. While multiple efficient visualization methods for n-D data analysis exist, the loss of information, occlusion, and clutter continue to be a challenge. This paper proposes and explores a new interactive method for visual discovery of n-D relations for supervised learning. The method includes automatic, interactive, and combined algorithms for discovering linear relations, dimension reduction, and generalization for non-linear relations. This method is a special category of reversible General Line Coordinates (GLC). It produces graphs in 2-D that represent …