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Programming Languages and Compilers Commons™

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Selected Works

2016

Articles 1 - 5 of 5

Full-Text Articles in Programming Languages and Compilers

Heat Map Analysis Of Rna-Seq Data Using Rstudio, Ray A. Enke, Ashton Holub Nov 2016

Heat Map Analysis Of Rna-Seq Data Using Rstudio, Ray A. Enke, Ashton Holub

Ray Enke Ph.D.

This in class exercise focuses on using the CummeRbund package in RStudio to create heat maps for analyzing differential gene expression output generated by Cuffdiff in DNA Subway Green Line

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Intro To Rstudio, Ray A. Enke, Ashton Holub Nov 2016

Intro To Rstudio, Ray A. Enke, Ashton Holub

Ray Enke Ph.D.

This in class exercise is designed to teach novices about the basic features of R and RStudio using a non-biological data set called Gapminder. It is a modified version of a Data Carpentry Workshop that I use to teach programming to beginners.

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User Interface Design, Moritz Stefaner, Sebastien Ferre, Saverio Perugini, Jonathan Koren, Yi Zhang Apr 2016

User Interface Design, Moritz Stefaner, Sebastien Ferre, Saverio Perugini, Jonathan Koren, Yi Zhang

Saverio Perugini

As detailed in Chap. 1, system implementations for dynamic taxonomies and faceted search allow a wide range of query possibilities on the data. Only when these are made accessible by appropriate user interfaces, the resulting applications can support a variety of search, browsing and analysis tasks. User interface design in this area is confronted with specific challenges. This chapter presents an overview of both established and novel principles and solutions.

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Archive - A Data Management Program, James H. Devilbiss, C. Steven Whisnant, Yasmeen Shorish Jan 2016

Archive - A Data Management Program, James H. Devilbiss, C. Steven Whisnant, Yasmeen Shorish

Yasmeen Shorish

To meet funding agency requirements, a portable data management solution is presented for small research groups. The database created is simple, searchable, robust, and can reside across multiple hard drives. Employing a standard metadata schema for all data, the database ensures a high level of standardization, findability, and organization. The software is written in Perl, runs on UNIX, and presents a web-based user interface. It uses a fast, portable log-in scheme, making it easy to export to other locations. As research continues to move towards more open data sharing and reproducibility, this database solution is agile enough to accommodate external …

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An Immersive Telepresence System Using Rgb-D Sensors And Head-Mounted Display, Xinzhong Lu, Ju Shen, Saverio Perugini, Jianjun Yang Jan 2016

An Immersive Telepresence System Using Rgb-D Sensors And Head-Mounted Display, Xinzhong Lu, Ju Shen, Saverio Perugini, Jianjun Yang

Saverio Perugini

We present a tele-immersive system that enables people to interact with each other in a virtual world using body gestures in addition to verbal communication. Beyond the obvious applications, including general online conversations and gaming, we hypothesize that our proposed system would be particularly beneficial to education by offering rich visual contents and interactivity. One distinct feature is the integration of egocentric pose recognition that allows participants to use their gestures to demonstrate and manipulate virtual objects simultaneously. This functionality enables the instructor to effectively and efficiently explain and illustrate complex concepts or sophisticated problems in an intuitive manner. The …

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