Computer Sciences Commons^™

Cov-Inception: Covid-19 Detection Tool Using Chest X-Ray, Aswini Thota, Ololade Awodipe, Rashmi Patel

SMU Data Science Review

Since the pandemic started, researchers have been trying to find a way to detect COVID-19 which is a cost-effective, fast, and reliable way to keep the economy viable and running. This research details how chest X-ray radiography can be utilized to detect the infection. This can be for implementation in Airports, Schools, and places of business. Currently, Chest imaging is not a first-line test for COVID-19 due to low diagnostic accuracy and confounding with other viral pneumonia. Different pre-trained algorithms were fine-tuned and applied to the images to train the model and the best model obtained was fine-tuned InceptionV3 model …

A Machine Learning Framework For Identifying Molecular Biomarkers From Transcriptomic Cancer Data, Md Abdullah Al Mamun

FIU Electronic Theses and Dissertations

Cancer is a complex molecular process due to abnormal changes in the genome, such as mutation and copy number variation, and epigenetic aberrations such as dysregulations of long non-coding RNA (lncRNA). These abnormal changes are reflected in transcriptome by turning oncogenes on and tumor suppressor genes off, which are considered cancer biomarkers.

However, transcriptomic data is high dimensional, and finding the best subset of genes (features) related to causing cancer is computationally challenging and expensive. Thus, developing a feature selection framework to discover molecular biomarkers for cancer is critical.

Traditional approaches for biomarker discovery calculate the fold change for each …

Split Classification Model For Complex Clustered Data, Katherine Gerot

Honors Theses

Classification in high-dimensional data has generated tremendous interest in a multitude of fields. Data in higher dimensions often tend to reside in non-Euclidean metric space. This prevents Euclidean-based classification methodologies, such as regression, from reliably modeling the data. Many proposed models rely on computationally-complex embedding to convert the data to a more usable format. Others, namely the Support Vector Machine, rely on kernel manipulation to implicitly describe the "feature space" to arrive at a non-linear decision boundary. The proposed methodology in this paper seeks to classify complex data in a relatively computationally-simple and explainable manner.

Shape-Based Classification Of Partially Observed Curves, With Applications To Anthropology, Gregory J. Matthews, Karthik Bharath, Sebastian Kurtek, Juliet K. Brophy, George K. Thiruvathukal, Ofer Harel

Computer Science: Faculty Publications and Other Works

We consider the problem of classifying curves when they are observed only partially on their parameter domains. We propose computational methods for (i) completion of partially observed curves; (ii) assessment of completion variability through a nonparametric multiple imputation procedure; (iii) development of nearest neighbor classifiers compatible with the completion techniques. Our contributions are founded on exploiting the geometric notion of shape of a curve, defined as those aspects of a curve that remain unchanged under translations, rotations and reparameterizations. Explicit incorporation of shape information into the computational methods plays the dual role of limiting the set of all possible completions …

An Analysis Of The Success Of Farmers Markets In Kentucky Using Logistic Regression And Support Vector Machines, Jeron Russell

Mahurin Honors College Capstone Experience/Thesis Projects

The purpose of this research is to look at the relationship that market-specific, economic, and demographic variables have with the success of farmers markets in Kentucky. It additionally seeks to build a tool for predicting farmers market success that could be used by policy makers to aid in decision-making processes concerning farmers markets. Logistic regression and Support Vector Machines (SVMs) are used on data acquired from the Kentucky Department of Agriculture and the American Community Survey in order to analyze the data in a traditional statistical approach as well as a machine learning approach. The results included an SVM model …

Adaptive Feature Engineering Modeling For Ultrasound Image Classification For Decision Support, Hatwib Mugasa

Doctoral Dissertations

Ultrasonography is considered a relatively safe option for the diagnosis of benign and malignant cancer lesions due to the low-energy sound waves used. However, the visual interpretation of the ultrasound images is time-consuming and usually has high false alerts due to speckle noise. Improved methods of collection image-based data have been proposed to reduce noise in the images; however, this has proved not to solve the problem due to the complex nature of images and the exponential growth of biomedical datasets. Secondly, the target class in real-world biomedical datasets, that is the focus of interest of a biopsy, is usually …

Machine Learning In Support Of Electric Distribution Asset Failure Prediction, Robert D. Flamenbaum, Thomas Pompo, Christopher Havenstein, Jade Thiemsuwan

SMU Data Science Review

In this paper, we present novel approaches to predicting as- set failure in the electric distribution system. Failures in overhead power lines and their associated equipment in particular, pose significant finan- cial and environmental threats to electric utilities. Electric device failure furthermore poses a burden on customers and can pose serious risk to life and livelihood. Working with asset data acquired from an electric utility in Southern California, and incorporating environmental and geospatial data from around the region, we applied a Random Forest methodology to predict which overhead distribution lines are most vulnerable to fail- ure. Our results provide evidence …

Machine Learning Pipeline For Exoplanet Classification, George Clayton Sturrock, Brychan Manry, Sohail Rafiqi

SMU Data Science Review

Planet identification has typically been a tasked performed exclusively by teams of astronomers and astrophysicists using methods and tools accessible only to those with years of academic education and training. NASA’s Exoplanet Exploration program has introduced modern satellites capable of capturing a vast array of data regarding celestial objects of interest to assist with researching these objects. The availability of satellite data has opened up the task of planet identification to individuals capable of writing and interpreting machine learning models. In this study, several classification models and datasets are utilized to assign a probability of an observation being an exoplanet. …

Multiclass Classification Using Support Vector Machines, Duleep Prasanna W. Rathgamage Don

Electronic Theses and Dissertations

In this thesis, we discuss different SVM methods for multiclass classification and introduce the Divide and Conquer Support Vector Machine (DCSVM) algorithm which relies on data sparsity in high dimensional space and performs a smart partitioning of the whole training data set into disjoint subsets that are easily separable. A single prediction performed between two partitions eliminates one or more classes in a single partition, leaving only a reduced number of candidate classes for subsequent steps. The algorithm continues recursively, reducing the number of classes at each step until a final binary decision is made between the last two classes …

A Framework For The Statistical Analysis Of Mass Spectrometry Imaging Experiments, Kyle Bemis

Open Access Dissertations

Mass spectrometry (MS) imaging is a powerful investigation technique for a wide range of biological applications such as molecular histology of tissue, whole body sections, and bacterial films , and biomedical applications such as cancer diagnosis. MS imaging visualizes the spatial distribution of molecular ions in a sample by repeatedly collecting mass spectra across its surface, resulting in complex, high-dimensional imaging datasets. Two of the primary goals of statistical analysis of MS imaging experiments are classification (for supervised experiments), i.e. assigning pixels to pre-defined classes based on their spectral profiles, and segmentation (for unsupervised experiments), i.e. assigning pixels to newly …

Better Physical Activity Classification Using Smartphone Acceleration Sensor, Muhammad Arif, Mohsin Bilal, Ahmed Kattan, Sheikh Iqbal Ahamed

Mathematics, Statistics and Computer Science Faculty Research and Publications

Obesity is becoming one of the serious problems for the health of worldwide population. Social interactions on mobile phones and computers via internet through social e-networks are one of the major causes of lack of physical activities. For the health specialist, it is important to track the record of physical activities of the obese or overweight patients to supervise weight loss control. In this study, acceleration sensor present in the smartphone is used to monitor the physical activity of the user. Physical activities including Walking, Jogging, Sitting, Standing, Walking upstairs and Walking downstairs are classified. Time domain features are extracted …