Computer Sciences Commons^™

Better Pay Attention Whilst Fuzzing, Shunkai Zhu, Jingyi Wang, Jun Sun, Jie Yang, Xingwei Lin, Liyi Zhang, Peng Cheng

Research Collection School Of Computing and Information Systems

Fuzzing is one of the prevailing methods for vulnerability detection. However, even state-of-the-art fuzzing methods become ineffective after some period of time, i.e., the coverage hardly improves as existing methods are ineffective to focus the attention of fuzzing on covering the hard-to-trigger program paths. In other words, they cannot generate inputs that can break the bottleneck due to the fundamental difficulty in capturing the complex relations between the test inputs and program coverage. In particular, existing fuzzers suffer from the following main limitations: 1) lacking an overall analysis of the program to identify the most “rewarding” seeds, and 2) lacking …

On The Sustainability Of Deep Learning Projects: Maintainers' Perspective, Junxiao Han, Jiakun Liu, David Lo, Chen Zhi, Yishan Chen, Shuiguang Deng

Research Collection School Of Computing and Information Systems

Deep learning (DL) techniques have grown in leaps and bounds in both academia and industry over the past few years. Despite the growth of DL projects, there has been little study on how DL projects evolve, whether maintainers in this domain encounter a dramatic increase in workload and whether or not existing maintainers can guarantee the sustained development of projects. To address this gap, we perform an empirical study to investigate the sustainability of DL projects, understand maintainers' workloads and workloads growth in DL projects, and compare them with traditional open-source software (OSS) projects. In this regard, we first investigate …

Towards Safe Automated Refactoring Of Imperative Deep Learning Programs To Graph Execution, Raffi Takvor Khatchadourian Ph.D., Tatiana Castro Vélez, Mehdi Bagherzadeh, Nan Jia, Anita Raja

Publications and Research

Efficiency is essential to support responsiveness w.r.t. ever-growing datasets, especially for Deep Learning (DL) systems. DL frameworks have traditionally embraced deferred execution-style DL code—supporting symbolic, graph-based Deep Neural Network (DNN) computation. While scalable, such development is error-prone, non-intuitive, and difficult to debug. Consequently, more natural, imperative DL frameworks encouraging eager execution have emerged at the expense of run-time performance. Though hybrid approaches aim for the “best of both worlds,” using them effectively requires subtle considerations to make code amenable to safe, accurate, and efficient graph execution. We present our ongoing work on automated refactoring that assists developers in specifying whether …

Experimental Comparison Of Features, Analyses, And Classifiers For Android Malware Detection, Lwin Khin Shar, Biniam Fisseha Demissie, Mariano Ceccato, Naing Tun Yan, David Lo, Lingxiao Jiang, Christoph Bienert

Research Collection School Of Computing and Information Systems

Android malware detection has been an active area of research. In the past decade, several machine learning-based approaches based on different types of features that may characterize Android malware behaviors have been proposed. The usually-analyzed features include API usages and sequences at various abstraction levels (e.g., class and package), extracted using static or dynamic analysis. Additionally, features that characterize permission uses, native API calls and reflection have also been analyzed. Initial works used conventional classifiers such as Random Forest to learn on those features. In recent years, deep learning-based classifiers such as Recurrent Neural Network have been explored. Considering various …

Arduinoprog: Towards Automating Arduino Programming, Imam Nur Bani Yusuf, Diyanah Binte Abdul Jamal, Lingxiao Jiang

Research Collection School Of Computing and Information Systems

Writing code for Arduino poses unique challenges. A developer 1) needs hardware-specific knowledge about the interface configuration between the Arduino controller and the I/Ohardware, 2) identifies a suitable driver library for the I/O hardware, and 3) follows certain usage patterns of the driver library in order to use them properly. In this work, based on a study of real-world user queries posted in the Arduino forum, we propose ArduinoProg to address such challenges. ArduinoProg consists of three components, i.e., Library Retriever, Configuration Classifier, and Pattern Generator. Given a query, Library Retriever retrieves library names relevant to the I/O hardware identified …

Optimizing Collective Communication For Scalable Scientific Computing And Deep Learning, Jiali Li

Doctoral Dissertations

In the realm of distributed computing, collective operations involve coordinated communication and synchronization among multiple processing units, enabling efficient data exchange and collaboration. Scientific applications, such as simulations, computational fluid dynamics, and scalable deep learning, require complex computations that can be parallelized across multiple nodes in a distributed system. These applications often involve data-dependent communication patterns, where collective operations are critical for achieving high performance in data exchange. Optimizing collective operations for scientific applications and deep learning involves improving the algorithms, communication patterns, and data distribution strategies to minimize communication overhead and maximize computational efficiency.

Within the context of this …

Automating Arduino Programming: From Hardware Setups To Sample Source Code Generation, Imam Nur Bani Yusuf, Diyanah Binte Abdul Jamal, Lingxiao Jiang

Research Collection School Of Computing and Information Systems

An embedded system is a system consisting of software code, controller hardware, and I/O (Input/Output) hardware that performs a specific task. Developing an embedded system presents several challenges. First, the development often involves configuring hardware that requires domain-specific knowledge. Second, the library for the hardware may have API usage patterns that must be followed. To overcome such challenges, we propose a framework called ArduinoProg towards the automatic generation of Arduino applications. ArduinoProg takes a natural language query as input and outputs the configuration and API usage pattern for the hardware described in the query. Motivated by our findings on the …

An Empirical Study Of Pre-Trained Model Reuse In The Hugging Face Deep Learning Model Registry, Wenxin Jiang, Nicholas Synovic, Matt Hyatt, Taylor R. Schorlemmer, Rohan Sethi, Yung-Hsiang Lu, George K. Thiruvathukal, James C. Davis

Department of Electrical and Computer Engineering Faculty Publications

Deep Neural Networks (DNNs) are being adopted as components in software systems. Creating and specializing DNNs from scratch has grown increasingly difficult as state-of-the-art architectures grow more complex. Following the path of traditional software engineering, machine learning engineers have begun to reuse large-scale pre-trained models (PTMs) and fine-tune these models for downstream tasks. Prior works have studied reuse practices for traditional software packages to guide software engineers towards better package maintenance and dependency management. We lack a similar foundation of knowledge to guide behaviors in pre-trained model ecosystems.

In this work, we present the first empirical investigation of PTM reuse. …

Face Anti-Spoofing And Deep Learning Based Unsupervised Image Recognition Systems, Enoch Solomon

Theses and Dissertations

One of the main problems of a supervised deep learning approach is that it requires large amounts of labeled training data, which are not always easily available. This PhD dissertation addresses the above-mentioned problem by using a novel unsupervised deep learning face verification system called UFace, that does not require labeled training data as it automatically, in an unsupervised way, generates training data from even a relatively small size of data. The method starts by selecting, in unsupervised way, k-most similar and k-most dissimilar images for a given face image. Moreover, this PhD dissertation proposes a new loss function to …

The Role Of Generative Adversarial Networks In Bioimage Analysis And Computational Diagnostics., Ahmed Naglah

Electronic Theses and Dissertations

Computational technologies can contribute to the modeling and simulation of the biological environments and activities towards achieving better interpretations, analysis, and understanding. With the emergence of digital pathology, we can observe an increasing demand for more innovative, effective, and efficient computational models. Under the umbrella of artificial intelligence, deep learning mimics the brain’s way in learn complex relationships through data and experiences. In the field of bioimage analysis, models usually comprise discriminative approaches such as classification and segmentation tasks. In this thesis, we study how we can use generative AI models to improve bioimage analysis tasks using Generative Adversarial Networks …

Dronlomaly: Runtime Detection Of Anomalous Drone Behaviors Via Log Analysis And Deep Learning, Lwin Khin Shar, Wei Minn, Nguyen Binh Duong Ta, Jianli Fan, Lingxiao Jiang, Daniel Wai Kiat Lim

Research Collection School Of Computing and Information Systems

Drones are increasingly popular and getting used in a variety of missions such as area surveillance, pipeline inspection, cinematography, etc. While the drone is conducting a mission, anomalies such as sensor fault, actuator fault, configuration errors, bugs in controller program, remote cyber- attack, etc., may affect the drone’s physical stability and cause serious safety violations such as crashing into the public. During a flight mission, drones typically log flight status and state units such as GPS coordinates, actuator outputs, accelerator readings, gyroscopic readings, etc. These log data may reflect the above-mentioned anomalies. In this paper, we propose a novel, deep …

Quote: Quality-Oriented Testing For Deep Learning Systems, Jialuo Chen, Jingyi Wang, Xingjun Ma, Youcheng Sun, Jun Sun, Peixin Zhang, Peng Cheng

Research Collection School Of Computing and Information Systems

Recently, there has been a significant growth of interest in applying software engineering techniques for the quality assurance of deep learning (DL) systems. One popular direction is deep learning testing, i.e., given a property of test, defects of DL systems are found either by fuzzing or guided search with the help of certain testing metrics. However, recent studies have revealed that the neuron coverage metrics, commonly used by most existing DL testing approaches, are not necessarily correlated with model quality (e.g., robustness, the most studied model property), and are also not an effective measurement on the confidence of the model …

Recipegen++: An Automated Trigger Action Programs Generator, Imam Nur Bani Yusuf, Diyanah Abdul Jamal, Lingxiao Jiang, David Lo

Research Collection School Of Computing and Information Systems

Trigger Action Programs (TAPs) are event-driven rules that allow users to automate smart-devices and internet services. Users can write TAPs by specifying triggers and actions from a set of predefined channels and functions. Despite its simplicity, composing TAPs can still be challenging for users due to the enormous search space of available triggers and actions. The growing popularity of TAPs is followed by the increasing number of supported devices and services, resulting in a huge number of possible combinations between triggers and actions. Motivated by such a fact, we improve our prior work and propose RecipeGen++, a deep-learning-based approach that …

Hierarchical Semantic-Aware Neural Code Representation, Yuan Jiang, Xiaohong Su, Christoph Treude, Tiantian Wang

Research Collection School Of Computing and Information Systems

Code representation is a fundamental problem in many software engineering tasks. Despite the effort made by many researchers, it is still hard for existing methods to fully extract syntactic, structural and sequential features of source code, which form the hierarchical semantics of the program and are necessary to achieve a deeper code understanding. To alleviate this difficulty, we propose a new supervised approach based on the novel use of Tree-LSTM to incorporate the sequential and the global semantic features of programs explicitly into the representation model. Unlike previous techniques, our proposed model can not only learn low-level syntactic information within …

A Tool-Supported Metamodel For Program Bugfix Analysis In Empirical Software Engineering, Manal Zneit

Theses and Dissertations

This thesis describes a software modeling approach aimed at addressing empirical studies in software engineering. We build a metamodel that provides an overview of the taxonomy of program bugfixes in deep learning programs. For modeling purposes, we present a prototype tool that is an implementation of the model-driven techniques presented.

Challenges In Migrating Imperative Deep Learning Programs To Graph Execution: An Empirical Study, Tatiana Castro Vélez, Raffi T. Khatchadourian, Mehdi Bagherzadeh, Anita Raja

Publications and Research

Efficiency is essential to support responsiveness w.r.t. ever-growing datasets, especially for Deep Learning (DL) systems. DL frameworks have traditionally embraced deferred execution-style DL code that supports symbolic, graph-based Deep Neural Network (DNN) computation. While scalable, such development tends to produce DL code that is error-prone, non-intuitive, and difficult to debug. Consequently, more natural, less error-prone imperative DL frameworks encouraging eager execution have emerged at the expense of run-time performance. While hybrid approaches aim for the "best of both worlds," the challenges in applying them in the real world are largely unknown. We conduct a data-driven analysis of challenges—and resultant bugs—involved …

Comai: Enabling Lightweight, Collaborative Intelligence By Retrofitting Vision Dnns, Kasthuri Jayarajah, Dhanuja Wanniarachchige, Tarek Abdelzaher, Archan Misra

Research Collection School Of Computing and Information Systems

While Deep Neural Network (DNN) models have transformed machine vision capabilities, their extremely high computational complexity and model sizes present a formidable deployment roadblock for AIoT applications. We show that the complexity-vs-accuracy-vs-communication tradeoffs for such DNN models can be significantly addressed via a novel, lightweight form of “collaborative machine intelligence” that requires only runtime changes to the inference process. In our proposed approach, called ComAI, the DNN pipelines of different vision sensors share intermediate processing state with one another, effectively providing hints about objects located within their mutually-overlapping Field-of-Views (FoVs). CoMAI uses two novel techniques: (a) a secondary shallow ML …

"More Than Deep Learning": Post-Processing For Api Sequence Recommendation, Chi Chen, Xin Peng, Bihuan Chen, Jun Sun, Zhenchang Xing, Xin Wang, Wenyun Zhao

Research Collection School Of Computing and Information Systems

In the daily development process, developers often need assistance in finding a sequence of APIs to accomplish their development tasks. Existing deep learning models, which have recently been developed for recommending one single API, can be adapted by using encoder-decoder models together with beam search to generate API sequence recommendations. However, the generated API sequence recommendations heavily rely on the probabilities of API suggestions at each decoding step, which do not take into account other domain-specific factors (e.g., whether an API suggestion satisfies the program syntax and how diverse the API sequence recommendations are). Moreover, it is difficult for developers …

A Survey On Deep Learning For Software Engineering, Yanming Yang, Xin Xia, David Lo

Research Collection School Of Computing and Information Systems

In 2006, Geoffrey Hinton proposed the concept of training "Deep Neural Networks (DNNs)" and an improved model training method to break the bottleneck of neural network development. More recently, the introduction of AlphaGo in 2016 demonstrated the powerful learning ability of deep learning and its enormous potential. Deep learning has been increasingly used to develop state-of-the-art software engineering (SE) research tools due to its ability to boost performance for various SE tasks. There are many factors, e.g., deep learning model selection, internal structure differences, and model optimization techniques, that may have an impact on the performance of DNNs applied in …

Predictive Models In Software Engineering: Challenges And Opportunities, Yanming Yang, Xin Xia, David Lo, Tingting Bi, John C. Grundy, Xiaohu Yang

Research Collection School Of Computing and Information Systems

Predictive models are one of the most important techniques that are widely applied in many areas of software engineering. There have been a large number of primary studies that apply predictive models and that present well-performed studies in various research domains, including software requirements, software design and development, testing and debugging, and software maintenance. This article is a first attempt to systematically organize knowledge in this area by surveying a body of 421 papers on predictive models published between 2009 and 2020. We describe the key models and approaches used, classify the different models, summarize the range of key application …

Contrastive Learning For Unsupervised Auditory Texture Models, Christina Trexler

Computer Science and Computer Engineering Undergraduate Honors Theses

Sounds with a high level of stationarity, also known as sound textures, have perceptually relevant features which can be captured by stimulus-computable models. This makes texture-like sounds, such as those made by rain, wind, and fire, an appealing test case for understanding the underlying mechanisms of auditory recognition. Previous auditory texture models typically measured statistics from auditory filter bank representations, and the statistics they used were somewhat ad-hoc, hand-engineered through a process of trial and error. Here, we investigate whether a better auditory texture representation can be obtained via contrastive learning, taking advantage of the stationarity of auditory textures to …

Patchnet: Hierarchical Deep Learning-Based Stable Patch Identification For The Linux Kernel, Thong Hoang, Julia Lawall, Yuan Tian, Richard J. Oentaryo, David Lo

Research Collection School Of Computing and Information Systems

Linux kernel stable versions serve the needs of users who value stability of the kernel over new features. The quality of such stable versions depends on the initiative of kernel developers and maintainers to propagate bug fixing patches to the stable versions. Thus, it is desirable to consider to what extent this process can be automated. A previous approach relies on words from commit messages and a small set of manually constructed code features. This approach, however, shows only moderate accuracy. In this paper, we investigate whether deep learning can provide a more accurate solution. We propose PatchNet, a hierarchical …

Computer-Aided Diagnosis Of Low Grade Endometrial Stromal Sarcoma (Lgess), Xinxin Yang, Mark Stamp

Faculty Research, Scholarly, and Creative Activity

Low grade endometrial stromal sarcoma (LGESS) accounts for about 0.2% of all uterine cancer cases. Approximately 75% of LGESS patients are initially misdiagnosed with leiomyoma, which is a type of benign tumor, also known as fibroids. In this research, uterine tissue biopsy images of potential LGESS patients are preprocessed using segmentation and stain normalization algorithms. We then apply a variety of classic machine learning and advanced deep learning models to classify tissue images as either benign or cancerous. For the classic techniques considered, the highest classification accuracy we attain is about 0.85, while our best deep learning model achieves an …

Automatic Fairness Testing Of Neural Classifiers Through Adversarial Sampling, Peixin Zhang, Jingyi Wang, Jun Sun, Xinyu Wang, Guoliang Dong, Xinggen Wang, Ting Dai, Jinsong Dong

Research Collection School Of Computing and Information Systems

Although deep learning has demonstrated astonishing performance in many applications, there are still concerns about its dependability. One desirable property of deep learning applications with societal impact is fairness (i.e., non-discrimination). Unfortunately, discrimination might be intrinsically embedded into the models due to the discrimination in the training data. As a countermeasure, fairness testing systemically identifies discriminatory samples, which can be used to retrain the model and improve the model’s fairness. Existing fairness testing approaches however have two major limitations. Firstly, they only work well on traditional machine learning models and have poor performance (e.g., effectiveness and efficiency) on deep learning …

Pruning-Aware Merging For Efficient Multitask Inference, Dawei Gao, Xiaoxi He, Zimu Zhou, Yongxin Tong, Lothar Thiele

Research Collection School Of Computing and Information Systems

Many mobile applications demand selective execution of multiple correlated deep learning inference tasks on resource-constrained platforms. Given a set of deep neural networks, each pre-trained for a single task, it is desired that executing arbitrary combinations of tasks yields minimal computation cost. Pruning each network separately yields suboptimal computation cost due to task relatedness. A promising remedy is to merge the networks into a multitask network to eliminate redundancy across tasks before network pruning. However, pruning a multitask network combined by existing network merging schemes cannot minimise the computation cost of every task combination because they do not consider such …

Attack As Defense: Characterizing Adversarial Examples Using Robustness, Zhe Zhao, Guangke Chen, Jingyi Wang, Yiwei Yang, Fu Song, Jun Sun

Research Collection School Of Computing and Information Systems

As a new programming paradigm, deep learning has expanded its application to many real-world problems. At the same time, deep learning based software are found to be vulnerable to adversarial attacks. Though various defense mechanisms have been proposed to improve robustness of deep learning software, many of them are ineffective against adaptive attacks. In this work, we propose a novel characterization to distinguish adversarial examples from benign ones based on the observation that adversarial examples are significantly less robust than benign ones. As existing robustness measurement does not scale to large networks, we propose a novel defense framework, named attack …

Robot: Robustness-Oriented Testing For Deep Learning Systems, Jingyi Wang, Jialuo Chen, Youcheng Sun, Xingjun Ma, Dongxia Wang, Jun Sun, Peng Cheng

Research Collection School Of Computing and Information Systems

Recently, there has been a significant growth of interest in applying software engineering techniques for the quality assurance of deep learning (DL) systems. One popular direction is deep learning testing, where adversarial examples (a.k.a. bugs) of DL systems are found either by fuzzing or guided search with the help of certain testing metrics. However, recent studies have revealed that the commonly used neuron coverage metrics by existing DL testing approaches are not correlated to model robustness. It is also not an effective measurement on the confidence of the model robustness after testing. In this work, we address this gap by …

Breaking Neural Reasoning Architectures With Metamorphic Relation-Based Adversarial Examples, Alvin Chan, Lei Ma, Felix Juefei-Xu, Yew-Soon Ong, Xiaofei Xie, Minhui Xue, Yang Liu

Research Collection School Of Computing and Information Systems

The ability to read, reason, and infer lies at the heart of neural reasoning architectures. After all, the ability to perform logical reasoning over language remains a coveted goal of Artificial Intelligence. To this end, models such as the Turing-complete differentiable neural computer (DNC) boast of real logical reasoning capabilities, along with the ability to reason beyond simple surface-level matching. In this brief, we propose the first probe into DNC's logical reasoning capabilities with a focus on text-based question answering (QA). More concretely, we propose a conceptually simple but effective adversarial attack based on metamorphic relations. Our proposed adversarial attack …

On-Device Deep Learning Inference For System-On-Chip (Soc) Architectures, Tom Springer, Elia Eiroa-Lledo, Elizabeth Stevens, Erik Linstead

Engineering Faculty Articles and Research

As machine learning becomes ubiquitous, the need to deploy models on real-time, embedded systems will become increasingly critical. This is especially true for deep learning solutions, whose large models pose interesting challenges for target architectures at the “edge” that are resource-constrained. The realization of machine learning, and deep learning, is being driven by the availability of specialized hardware, such as system-on-chip solutions, which provide some alleviation of constraints. Equally important, however, are the operating systems that run on this hardware, and specifically the ability to leverage commercial real-time operating systems which, unlike general purpose operating systems such as Linux, can …

An Exploratory Study On The Introduction And Removal Of Different Types Of Technical Debt In Deep Learning Frameworks, Jiakun Liu, Qiao Huang, Xin Xia, Emad Shihab, David Lo, Shanping Li

Research Collection School Of Computing and Information Systems

To complete tasks faster, developers often have to sacrifice the quality of the software. Such compromised practice results in the increasing burden to developers in future development. The metaphor, technical debt, describes such practice. Prior research has illustrated the negative impact of technical debt, and many researchers investigated how developers deal with a certain type of technical debt. However, few studies focused on the removal of different types of technical debt in practice. To fill this gap, we use the introduction and removal of different types of self-admitted technical debt (i.e., SATD) in 7 deep learning frameworks as an example. …