Computer Sciences Commons^™

A Machine Learning Framework For Identifying Molecular Biomarkers From Transcriptomic Cancer Data, Md Abdullah Al Mamun

FIU Electronic Theses and Dissertations

Cancer is a complex molecular process due to abnormal changes in the genome, such as mutation and copy number variation, and epigenetic aberrations such as dysregulations of long non-coding RNA (lncRNA). These abnormal changes are reflected in transcriptome by turning oncogenes on and tumor suppressor genes off, which are considered cancer biomarkers.

However, transcriptomic data is high dimensional, and finding the best subset of genes (features) related to causing cancer is computationally challenging and expensive. Thus, developing a feature selection framework to discover molecular biomarkers for cancer is critical.

Traditional approaches for biomarker discovery calculate the fold change for each …

Computer-Aided Classification Of Impulse Oscillometric Measures Of Respiratory Small Airways Function In Children, Nancy Selene Avila

Open Access Theses & Dissertations

Computer-aided classification of respiratory small airways dysfunction is not an easy task. There is a need to develop more robust classifiers, specifically for children as the classification studies performed to date have the following limitations: 1) they include features derived from tests that are not suitable for children and 2) they cannot distinguish between mild and severe small airway dysfunction.

This Dissertation describes the classification algorithms with high discriminative capacity to distinguish different levels of respiratory small airways function in children (Asthma, Small Airways Impairment, Possible Small Airways Impairment, and Normal lung function). This ability came from innovative feature selection, …

Enhanced Breast Cancer Classification With Automatic Thresholding Using Support Vector Machine And Harris Corner Detection, Mohammad Taheri

Electronic Theses and Dissertations

Image classification and extracting the characteristics of a tumor are the powerful tools in medical science. In case of breast cancer medical treatment, the breast cancer classification methods can be used to classify input images as benign and malignant classes for better diagnoses and earlier detection with breast tumors. However, classification process can be challenging because of the existence of noise in the images, and complicated structures of the image. Manual classification of the images is timeconsuming, and need to be done only by medical experts. Hence using an automated medical image classification tool is useful and necessary. In addition, …

Breast Cancer Classification Of Mammographic Masses Using Circularity Max Metric, A New Method, Tae Keun Heo

Electronic Theses and Dissertations

Breast cancer classification can be divided into two categories. The first category is a benign tumor, and the other is a malignant tumor. The main purpose of breast cancer classification is to classify abnormalities into benign or malignant classes and thus help physicians with further analysis by minimizing potential errors that can be made by fatigued or inexperienced physicians. This paper proposes a new shape metric based on the area ratio of a circle to classify mammographic images into benign and malignant class. Support Vector Machine is used as a machine learning tool for training and classification purposes. The improved …