Chemistry Commons^™

Beam Loss Analysis Through Particle Tracking Simulation, Marvin Valverde

STAR Program Research Presentations

Water soluble-polymers are commonly used to build detergents or other types of surfactants. These polymers are important because water soluble-polymers used in the development of surfactants have become an essential new factor in the cleaning of oil. However, the development of these surfactants has been constrained by the difficulty of producing them. For this synthesis, phenolic maleimide was used as starting material for a water-soluble polymer. This polymer will be able to break apart at set temperatures and self-assemble into a surfactant.

Adapting Cell-Free Protein Synthesis As A Platform Technology For Education, Grace W. Chu, Max Z. Levine, Nicole E. Gregorio, Javin P. Oza

STAR Program Research Presentations

Cell-free protein synthesis (CFPS) has emerged as an enabling biotechnology for research and biomanufacturing as it allows for the production of protein without the need for a living cell. Applications of CFPS include the construction of libraries for functional genomics and structural biology, the production of personalized medicine, and the expression of virus-like particles. The absence of a cell wall provides an open platform for direct manipulation of the reaction conditions and biological machinery. This project focuses on adapting the CFPS biotechnology to the classroom, making a hands-on bioengineering approach to learning protein synthesis accessible to students grades K-16 through …

Tof-Sims Analysis Of Plant Seed Interactions With Plant Growth-Promoting Bacteria, Tammy Pheuphong, Rachel Komorek, Xiao-Ying Yu

STAR Program Research Presentations

The use of time-of-flight secondary ion mass spectrometry (ToF-SIMS) in plant biology is a relatively unexplored and quickly developing field. The majority of research in plant SIMS involves the application of ToF-SIMS to study dried wood tissues, and only a handful of studies apply SIMS on plant stems, roots, and/or seeds. Our project provides a brief description and review of previous work using SIMS on plant stems, roots, and/or seeds, along with an emphasis on the sample preparation in each study. Additionally, the use of Brachypodium distachyon (Brachypodium) as a model system for research on grasses has also become more …

Applications Of Diels-Alder Chemistry In Polymer Synthesis, Joshua C. Stambaugh, Philip J. Costanzo, Sierra E. Gosting

STAR Program Research Presentations

Diels-Alder chemistry is utilized for a myriad of commercial applications during polymer synthesis, ranging from self-healing materials to heat responsive materials to emulsion coatings. In particular, the ability to regulate and control the amount and type of functional group linkages is key component for polymer applications. A common strategy that is employed is the use of phenolic maleimide as a dienophile during Diels-Alder synthesis to control the linkages on a polymer, which determines its properties and functionality. This summer was the beginning of a project to prepare a commercial scale, water-based emulsion floor coating/polish. The first step in this project …

Anisotropic Conductive Adhesives For Interdigitated Back Contact (Ibc) Silicon Solar Cells, Katherine M. Lohmuste, Manuel Schnabel, Maikel F.A.M. Van Hest

STAR Program Research Presentations

The current manufacturing process for solar panels using interdigitated back contact (IBC) silicon solar cells involves a multi-step metallization and interconnection process in which a substantial amount of silver is used. This work focuses on a new process using conductive adhesives (CA) which would increase efficiency and lower cost through a one-step metallization and interconnection process that combines with encapsulation using little silver and only requiring metal patterning on the back sheet or back glass. It would also not require direct metallization of the silicon, which would result in fewer defects, while increasing voltage and therefore efficiency. Silver-coated Poly(Methyl Methacrylate) …

Pnnl Dark Matter Bubble Chamber, Ryan Robinson

STAR Program Research Presentations

The Pacific Northwest National Laboratory (PNNL) prototype bubble chamber is intended to address issues encountered with the current PICO dark matter search detectors and improve the functionality of future experimental designs. The PNNL bubble chamber accomplishes this with a simplified interface between the hydraulic pressure controls and the target vessel and altering the standard chamber design such that it can be easily exchanged and replaced with vessels of various sizes and materials for testing purposes. The chamber itself is a glass vessel which houses perfluorobutane and holds the target fluid above room temperature and atmospheric pressure. The target fluid becomes …

X-Ray Spectroscopy Of Nio And Nanodiamond At Ssrl, Jackson Earl

STAR Program Research Presentations

The first aspect of this research project focuses on investigating the surface chemistry of high pressure high temperature (HPHT) nanodiamond by using X-ray spectroscopy techniques at the Stanford Synchrotron Radiation Lightsource (SSRL). HPHT nanodiamond is being examined as a biosensing tool for electric field detection based on the fluorescent nitrogen vacancy center hosted within diamond. With use of the transition edge spectrometer (TES), a state-of-the-art X-ray fluorescence detector, we are able to probe the surface and bulk properties of diamond. Preliminary work using density functional theory (DFT) has been done, offering insight into ground state energies and electronic structure. DFT …

Probing The Surface Of Nanodiamonds At Stanford Synchrotron Radiation Lightsource And San Jose State University, Jocelyn Valenzuela, Jackson Earl, Cynthia Melendrez, Grace Jeanpierre, Dennis Nordlund, Abraham Wolcott

STAR Program Research Presentations

The nitrogen-vacancy center in diamond is a promising tool in oncology, electric field sensing, and quantum cryptography. High-pressure high-temperature (HPHT) nanodiamonds (NDs) are prime contenders for these fields because they host nitrogen-vacancy centers (NVCs) which are applicable towards cancer detection and electric and magnetic field sensing. However, to apply HPHT NDs to these fields, the surface must first be functionalized—a difficult process because of the inert nature of the surface. The project at hand focuses on surface modification of HPHT NDs with amines to allow for further bioconjugation of small molecules and plasmonic shells. This is done via liquid-phase chemistry …

Usage Of Fomblin Y To Improve Water Repellence Of Surface Coatings, Shawn Pj Kirby, Jeffrey Alston, Andrew Guenthner

STAR Program Research Presentations

Fluoro-Decyl POSS (FDP) has shown strong potential as a water repellant surface coating. Additionally, Fomblin is a solvent believed to have the ability to control the crystallization of POSS compounds on surfaces. Controlling the crystallization is key to improving water repelling abilities of surfaces. Thus, dip coating FDP and Fomblin onto surfaces is being investigated for water repulsion, mechanical stability, and deposition feasibility. First, temperature dependence of solubility of Fluoro-Decyl POSS in Fomblin was tested using Dynamic Light Scattering. Relative water repelling abilities of different coatings were determined by measuring contact angle of surfaces with water. Coatings with and without …

Comparative Solubility Of Poss Compounds In Fomblin Y, Shawn Pj Kirby, Jeffrey Alston, Andrew Guenthner

STAR Program Research Presentations

Fluoro-Decyl POSS (FDP) has shown strong potential as a water repellant surface coating. Additionally, Fomblin is a solvent believed to have the ability to control the crystallization of POSS compounds on surfaces. Controlling the crystallization is key to improving water repelling abilities of surfaces. Thus, dip coating FDP and Fomblin onto surfaces is being investigated for water repulsion, mechanical stability, and deposition feasibility. However, in order for this to be successful, POSS must be soluble in Fomblin. Temperature dependence of solubility of Fluoro-Hexyl, Fluoro-Octyl, Fluoro-Decyl POSS in Fomblin was tested using Dynamic Light Scattering. The values were compared, and it …

Effect Of Surface Treatment On Liquid Adhesion Inside 3-D Structures, Madani A. Khan, Jeffrey Alston, Andrew Guenthner, Jacob Zavala

STAR Program Research Presentations

This study explores the relationship between chemical surface treatments on the interior of glass tubes and their resistance to fluid flow. By treating the interior of the tubes with functional silanes we can decrease or increase the interaction of the tube walls with the fluid column, which translates to changes in fluid column height for a given pressure differential. Resistance to fluid flow is quantified by using the tubes as integral parts of a barometric pressure column and measuring the changes in column height as the fluid is pulled into the tube by a set pressure differential. The barometric pressure …

Characterization Of S-Swcnt/Pf-Pd Dispersions And Networks, Tamara N. El-Hayek Ms., Jeffrey Blackburn, Andrew Ferguson, Tammy Pheuphong

STAR Program Research Presentations

Single-Walled Carbon Nanotubes (SWCNTs) are being investigated for their use in a wide variety of renewable energy applications. Their unique physical properties contribute to desirable traits such as a high carrier mobility, strong optical absorption and tunable electronic band gap. Unfortunately, due to variability in certain parameters, SWCNTs are limited in their application. The major drawback is that SWCNTs are variable in size and type and typical synthetic methods are not selective. As a result, selective methods must be developed in order to sort these tubes and extract those which are desirable for a particular application. Though there are several …

Gc Verification Of The Spacecraft Atmosphere Monitor, Jessica S. Castro, Richard D. Kidd, Jeffrey D. Hein

STAR Program Research Presentations

International Space Station crew members face the unique challenge of maintaining air quality due to the volatile organic compounds (VOCs) that have the potential to accumulate at unsafe levels. The Spacecraft Atmosphere Monitor (SAM) is a miniature gas chromatograph/mass spectrometer (GCMS) designed to measure major constituents (such as N₂, O₂ and CO₂) and trace VOCs within the cabin of the spacecraft. The gas chromatograph is responsible for separating the sample into its components in order to be characterized. The oven of the gas chromatograph must reach a temperature of 150°C in order to heat constituents …

Density Functional Theory Based Electrolyte Design Formulation For Lithium-Sulfur Batteries, Cynthia Ly, Carolyn Sturges, Vijay Murugesan

STAR Program Research Presentations

Lithium-ion (Li-ion) batteries are commonly used in portable electronics such as cellphones and laptops. Most Li-ion batteries operate on intercalation principle with typical theoretical specific energy of 400-600 (Wh/Kg). There is great scientific interest in lithium-sulfur (Li-S) batteries as a possible successor of traditional Li-ion batteries because Li-S holds the potential of being a very powerful (1550 Wh/kg theoretical specific energy) yet very cost-efficient battery (due the abundance and inexpensiveness of sulfur). However, one major problem in Li-S battery research is the polysulfide “shuttle phenomenon”, which is the shuttling of polysulfide species due to the dissolution of sulfide from the …

Calculating The Energy Barriers Required To Join Metal-Organic Framework Synthesis Intermediates With Non-Equilibrium Molecular Simulation, Marcus A. Tubbs, David Cantu, Roger Rousseau, Vassiliki-Alexandra Glezakou

STAR Program Research Presentations

Metal organic frameworks are synthetic porous materials with great capacity for adsorption of carbon dioxide and methane. They chemically appear as a chain-link fence with nodes of metal connected by organic linkers. The pores between the nodes define the characteristics of the material, allowing gas particles of specific size to pass through while blocking larger particulates. While there has been success in synthesizing small amounts of metal organic frameworks, the mechanistic details behind their assembly remain unknown. Understanding the synthesis mechanism is necessary to understand the kinetics involved and be able to produce this useful material on an industrial scale. …

Using In Situ Liquid Single Photon Ionization Mass Spectrometry (Spi-Ms) To Probe Lithium Polysulfide Electrolyte In Motion, Aala M. Al Hasan, Jiachao Yu, Juan Yao, Vijayakumar Murugesan, Manjula Nandasiri, Xiao-Ying Yu

STAR Program Research Presentations

The solid-liquid (s-l) interface is the most common interface encountered in electrochemical systems. The s-l interface has wide applications in energy storage, catalysis, and material sciences. In situ studies of chemical reactions taking place on the s-l interfaces can further our understanding of electron transfer and link to real-world device functions under challenging conditions. Direct probing of the solid electrode and liquid electrolyte interface has been realized using a vacuum compatible electrochemical microfluidic reactor, system for analysis at the liquid vacuum interface (SALVI) with time-of-flight secondary ion mass spectrometry (ToF-SIMS). Most recently, the electrochemical version of SALVI was integrated to …

Comparative Analysis Of In Situ Fibronectin Using Tof-Sims, Spi-Ms, And Dropdesi-Ms In A Microfluidic Reactor, Shannon Fasing, Xiao-Ying Yu, Juan Yao, Jiachao Yu

STAR Program Research Presentations

Fibronectin is an important biomolecule due to its role in cell differentiation, growth, kinesis, and adhesion. Such biological responses are mediated through membrane recognition and signaling; where fibronectin is found. Studying the outer molecular surface of fibronectin allows deeper insight into the microbiological reactions that occur during these processes. In situ mass spectrometry analysis in aqueous solution accurately represents fibronectin’s chemical components, made possible by a vacuum compatible microfluidic reactor, SALVI (System for Analysis at the Liquid Vacuum Interface). SALVI was paired with the analytical tools: time-of-flight secondary ion mass spectrometer (ToF-SIMS), single photon ionization mass spectrometer (SPI-MS) and drop …

The Effects Of Rain On Elemental Transport In Soils, Laura Schoenfeld

STAR Program Research Presentations

Mini Landscape Evolution Observatory (miniLEO) is a model landscape slope composed of granular basalt used to conduct small scale experiments to more clearly understand how elemental transport occurs during simulated rain events. For this experiment, rain events occurred three times a day in two hour increments at a rate of 30 mm/hr for 14 days to determine if exchangeable ions and target elements dissolve over time. An auto sampler collected the waterseepage every half hour at the bottom of the slope of miniLEO. Each seepage sample was tested or the amount of elements present in solution using ion chromatography and …

Probing The Transport Properties Of Chemically-Doped Single-Walled Carbon Nantotube Polymer Composites, Tammy Pheuphong, Tamara El-Hayek, Jeffrey Blackburn, Andrew Ferguson

STAR Program Research Presentations

Thermoelectric (TE) materials are used to convert waste heat into electrical power. Semiconducting single-walled carbon nanotubes (s-SWCNT) have great potential to be used in thermoelectric devices, either on their own or in composites with conducting polymers. Certain polymers can selectively extract s-SWCNT from raw carbon nanotube soot (containing impurities such as metallic SWCNT, amorphous carbon, metal catalysts particles), but most of these polymers (e.g. polyfluorenes) are electrical insulators, rendering them inefficient in TE nanocomposites. On the other hand, conducting polymers, such as poly(3,4-ethylenedioxythiophene) polystyrene sulfonate (PEDOT:PSS), have been used in efficient TE nanocomposites, but have never been rationally designed with …

Effects Of Surface Coatings On Crystalization Of Calcium Sulfate, Shawn Pj Kirby, Josiah Reams, Kamran Ghiassi, Jeffrey Alston

STAR Program Research Presentations

Deposits from hard water can be problematic as they can form scaling on boilers and cooling towers. Scaling can reduce thermal efficiency. Coatings can be used to prevent mineral fouling by changing the surface energy. Some deposits have inverse solubility; such as calcium sulfate. This means that as temperature rises, they become less soluble and can crystallize out of solution. Calcium sulfate is often found in hard water. Crystalization tests were done to determine how coatings such as various POSS (Polyhedral oligomeric silsesquioxane) compounds acted as nucleating surfaces for calcium sulfate. POSS compounds were tested in particular because they …

Calculating The Energy Barriers Required To Join Metal-Organic Framework Synthesis Intermediates With Non-Equilibrium Molecular Simulation, Marcus A. Tubbs, David Cantu, Roger Rousseau, Vassiliki-Alexandra Glezakou

STAR Program Research Presentations

Metal organic frameworks (MOFs) are synthetic materials made of a cage-like lattice of metal nodes connected by organic linkers. The pores between the nodes define the characteristics of the material. A MOF, MIL-101, has shown great capacity in the adsorption of carbon dioxide and methane, as well as in hydrogenation catalysis with palladium. While there has been success in synthesizing MIL-101 and other MOFs, the mechanistic details behind their assembly remain unknown. Understanding the synthesis mechanism is necessary to understand the kinetics involved and be able to produce this useful material on an industrial scale. Using MIL-101 as a prototypical …

Effect Of Surface Omniphobicity On Drying By Forced Convection, Madani A. Khan, Jeffrey Alston, Andrew Guenthner

STAR Program Research Presentations

Low energy surfaces can strongly repel both oil and water. Recently these surfaces have been fabricated on various substrates including fabric, aluminum, stainless steel and many other materials. In this experiment we explore the use of low energy surface deposition on aluminum alloy, stainless steel and silicon substrates, to enhance the drying rate of liquids removed from the surface by forced convection. We control surface roughness by substrate abrasion and by the growth of Al₂O₃ nanograss to enhance liquid repellence by use of a hierarchical texture. Liquid repellence of the substrates is measured by contact angles of …

Wet Chemical Synthesis And Characterization Of Nanomaterials For Solar Cell Applications, Krystle N. Sy, Ramprasad Gandhiraman, Jessica E. Koehne

STAR Program Research Presentations

During long term space missions, it is necessary to have a reliable source of energy. Solar cells are an easy and reliable way to convert energy from the sun to electrical energy. NASA has used solar cells manufactured on Earth as an energy source for many of its missions. In order to develop technologies that will enable high efficiency solar cells, we are synthesizing nanostructured materials. A range of nanostructured materials, such as titanium dioxide nanowires, nickel nanoparticles, copper nanoparticles, and silver nanoparticles/nanowires, are synthesized. In this work, we are reporting on the synthesis of these nanomaterials and the electron …

Chloroamino Acids As A Chemical Explanation For Viking Labeled Release Soil Activity On Mars, John C. Hironimus

STAR Program Research Presentations

The Viking missions to Mars, which took place in the 1970’s, performed several experiments on martian soil in an attempt to discern if there was microbial life present. In one set of experiments, a nutrient solution containing amino acids and organic substrates tagged with carbon-14 was injected into sample cells containing martian soil, and the evolution of labeled CO2 was monitored. The evolution of labeled CO2 indicated that there was a process occurring that broke down the nutrients in solution and released CO2 as a byproduct. Cellular metabolism releases CO2, so this result supported the idea of microbial life on …

Stability Of Lidocaine Tested By Forced Degradation And Its Interactions With Serum Albumin, Lindsay Nichols

STAR Program Research Presentations

A concern for future long-term manned space expeditions is the ability to treat illnesses with appropriate pharmaceuticals. However, pharmaceuticals degrade faster in space than on Earth presumably due to an abundance of space radiation. The stability of Lidocaine was investigated because it is a common pain reliever currently used on the International Space Station. One of the most common proteins in blood is serum albumin, which acts as a carrier to distribute drugs throughout the body. It is important to know how well the drug binds to serum albumin so that the rate of distribution of Lidocaine-bound protein in blood …

Fabrication And Characterization Of A Vertically-Oriented Graphene Supercapacitor, Patrick R. Rice, Jiaxin Cui, Ahmad Badr, Michael M. Oye, Jessica E. Koehne, Meyya Meyyappan

STAR Program Research Presentations

Supercapacitors, otherwise known as electrical double layer capacitors, are a new type of electrochemical capacitor whose storage capacity is governed by two principals: the electrostatic storage achieved by a separation of charge at the interface of an electrode with an electrolytic solution, and pseudocapacitance, whose electrical energy is achieved by faradaic redox reactions. This project reports the synthesis and characterization of vertically-oriented graphene grown on copper substrates as electrodes in electric double-layer capacitor. Graphene is a two-dimensional pure carbon material with a high potential for energy storage. With vertically-grown graphene, an exponentially-larger surface area is made available, allowing an increase …

Laboratory Evaluation Of Black Carbon Deposition Onto Snow And Transport Via Snowmelt, Larry D. Hermanson, Joshua P. Schwarz

STAR Program Research Presentations

Black carbon (BC) is an aerosol material produced by incomplete combustion of fossil fuels and biomass. BC has been shown to be the second most important anthropogenic climate warming agent after carbon dioxide due to its ability to absorb solar radiation, influence cloud behavior, and accelerate snow melt. BC in otherwise clean snow can significantly reduce its reflectivity. In order to learn about the significance of BC contamination in snow, we explored the deposition of BC onto snow and the transport of BC in snow during snowmelt. A Single Particle Soot Photometer (SP2), was used to measure the concentration and …

Detecting Non-Seismic Precursor Earthquake Signals Using Tree Antennas, Jaqueline O. Lopez

STAR Program Research Presentations

Forecasting earthquakes has yet to be achieved. However, there are numerous non-seismic precursor signals, which become detectable weeks to days before major events – for instance changes in Earth’s electrical surface potential. These changes are due to the arrival of positive electronic charge carriers, known as positive holes, stress-activated deep in the Earth’s crust, in the hypocenter of the future earthquake. Trees can be used as antennas for detecting the surface potential changes due to these mobile charges. This configuration allows for the detection of diurnal variations of the ground potential. Although we only had 105 days worth of data, …

Determining Force Field Parameters Involved With Metal Organic Framework Synthesis, Marcus A. Tubbs, David Cantu, Vanda Glezakou

STAR Program Research Presentations

Metal organic frameworks (MOFs) are synthetic materials made of a cage-like lattice with consistently spaced pores. The size of these pores are the defining characteristic of a MOF, as it determines which gases are allowed to pass through and which can be trapped. Examples of their potential use can be greenhouse gas sequestration or storage. Currently, the synthesis of MOFs is based on trial-and-error, and the successes are not well understood. We are working on building the theoretical framework that describes how a particular MOF, MIL-101, comes together during synthesis. Our initial approach was to simulate the possible reactions with …

Characterization Of Organic Carbon In Sediments From Old Rifle, Co, A Former Uranium Mill, Francis Michael Tee, Morris Jones, Sharon Bone, Michael Schaefer, Scott Fendorf, John Bargar

STAR Program Research Presentations

Characterization of sediments from Old Rifle, CO, a former uranium mill

More than 34 million gallons (~129 million liters) of groundwater are contaminated with uranium at Old Rifle, Colorado – a former uranium-processing site that operated until 1958. The original Department of Energy strategy for remediation, involving natural flushing of U from the groundwater through mixing with surface water, has not been as successful as predicted. The uranium plume is replenished when insoluble U(IV) is oxidized to the more mobile U(VI). Relatively thin pockets of silt-, clay-, and organic-rich sediments contain reduced uranium, iron and sulfur and are referred to …