Chemistry Commons^™

G-Ruption: The Third International Meeting On G-Quadruplex And G-Assembly, Liliya A. Yatsunyk, T. M. Bryan, F. B. Johnson

Chemistry & Biochemistry Faculty Works

A three and a half day conference focusing on nucleic acid structures called G-quadruplexes (G4s) and other guanine-based assemblies was held in Sorrento. Italy (June 28-July 1, 2011) and featured 35 invited talks and over 89 posters. The G-quadruplex field continues to expand at an explosive rate with the emergence of new connections to biology, chemistry, physics, and nanotechnology. Following the trend established by the previous two international G4 meetings, the conference touched upon all these areas and facilitated productive exchanges of ideas between researchers from all over the world.

Elemental Contributions From Minor And Major Constituents Of Bone On The Separation Of Radiostrontium, Ashlee Rae Dailey

UNLV Theses, Dissertations, Professional Papers, and Capstones

While many methods exist to separate and analyze radionuclides from a variety of environmental matrices, the performance of all of these methods is often limited by other interfering constituents that are consistently found in most of these samples. The presence of such constituents can significantly reduce the recovery of the radioisotopes of interests and lead to incomplete separations.

Strontium has the same oxidation state and a similar atomic radius as calcium and is therefore readily able to substitute for calcium in lattice sites. This similarity in behavior leads to the preferential accumulation of strontium in newly formed bone. The study …

Molecular Forensic Science Analysis Of Nuclear Materials, Dallas Reilly

UNLV Theses, Dissertations, Professional Papers, and Capstones

Concerns over the proliferation and instances of nuclear material in the environment have increased interest in the expansion of nuclear forensics analysis and attribution programs. A new related field, molecular forensic science (MFS) has helped meet this expansion by applying common scientific analyses to nuclear forensics scenarios. In this work, MFS was applied to three scenarios related to nuclear forensics analysis. In the first, uranium dioxide was synthesized and aged at four sets of static environmental conditions and studied for changes in chemical speciation. The second highlighted the importance of bulk versus particle characterizations by analyzing a heterogeneous industrially prepared …

Refractive Index Chemical Sensing With Noble Metal Nanoparticles, Phillip Blake

Graduate Theses and Dissertations

Chemical sensing is a key component in modern society, especially in engineering applications. Because of their widespread impact, improvements to chemical sensors are a significant area of research. One class of sensors, plasmonic sensors, is being heavily researched because of their ability to detect low levels of analyte in near real time without destroying the analyte. This work studies a new class of plasmonic sensor that utilizes diffractive coupling to improve sensor performance. Specifically, this work outlines the first study of diffractive coupling sensors with typical nanoparticle shapes. Sensitivity of this new class of sensor is directly compared to typical …

Synthesis Of Palladium-Based Electrocatalysis—From Pure Metal To Bimetallic Nanoparticles, Haijun Gao

Masters Theses

This thesis focuses on synthesis and characterization of palladium-based nanoparticles. Background information of the research in this thesis is provided in Chapter 1. Preparation and characterization of pure palladium nanoparticles are presented in Chapter 2. A fast and convenient method to prepare ultra small Pd nanoparticles via Pluronic P123 reduction is discussed in detail. Impregnation method and poly method are also studied in this chapter. Chapter 3 reports the studies of these methods to prepare ultra small bimetallic (bimetallic means a mixture of two metals) palladium-based nanoparticles. Oleylamine-mediated method used Pd nanoparticles prepared via P123 reduction as precursor. Ultra small …

Studies On Molecular Sieve Crystallization And Heteroatomic Substitution, Adam R. Macintosh

Electronic Thesis and Dissertation Repository

Molecular sieves have been scientifically and industrially important materials since their inception. These porous, crystalline networks of tetrahedrally coordinated atoms bridged by oxygen are known for their extremely high surface area and low density, making them excellent systems for catalysis. The framework of the AlPO₄ family of molecular sieves is itself non-catalytic, but through heteroatomic substitution these materials can diversify into the catalytically active silicoaluminophosphate (SAPO) and metalloaluminophosphate (MAPO) families of heterogeneous acid and redox catalysts. Research into the methods by which these substitutions occur, and the effects therein on the crystallization of the sieves, is of great importance, …

Design And Synthesis Of Fluorescence Turn-On Probes For Iron, Randy K. Jackson

Master's Theses

No abstract provided.

Nitrogen And Copper Doped Solar Light Active Tio2 Photocatalysts For Water Decontamination, Mike Fisher, Donal Keane, Pilar Fernandez-Ibanez, John Colreavy, Stephen Hinder, Kevin Mcguigan, Suresh Pillai

Articles

A novel class of photocatalytic coating capable of degrading bacterial and chemical contaminants in the presence of visible sunlight wavelengths was produced by depositing a stable photocatalytic TiO

2 film on the internal lumen of glass bottles via a sol–gel method. This coating was prepared in either undoped form or doped with nitrogen and/or copper to produce visible light-active TiO2 films which were annealed at 600 ◦C and were characterized by Raman and X-ray photoelectron spectroscopy. The presence of doped and undoped TiO2 films was found to accelerate the degradation of methylene blue in the presence of natural sunlight, while …

Investigations Of Zeolite Growth By Atomic Force Microscopy (Afm), Donghan Chen

Electronic Thesis and Dissertation Repository

Zeolites are microporous materials that have been used extensively in various fields. A better understanding on their crystallization process is important for their investigations. Atomic force microscopy (AFM) is a powerful tool for studying the growing traces on the crystal surface, providing information regarding the relation between surface events and framework structure. This thesis mainly focuses on the surface investigation of several zeolites and microporous materials. ZSM-11 single crystals were synthesized under hydrothermal conditions, and their crystallization process was monitored by AFM, PXRD, SEM, and SSNMR. SAPO-34 prepared under both HTS and DGC conditions showed morphological differences that are related …

Ionothermal Synthesis Of High Silica Zeolites In Deep Eutectic Solvents (Des), Zheng Sonia Lin

Electronic Thesis and Dissertation Repository

Phase-pure high silica zeolites have been synthesized using different deep eutectic solvents for the first time. ZSM-5 was made in tetrapropylammonium bromide/pentaerythritol. The reaction is affected by the amounts of seeding, water content, and organic structure-directing agent (SDA). Sodalite and ZSM-39 were prepared in tetramethylammonium chloride (TMACl)/1, 6-hexanediol by using the mineralizing agents NaOH and NH₄F, respectively. In urea/choline chloride, ZSM-5, Beta, ZSM-39, and ZSM-11 were made by using different organic SDAs in the presence of fluoride. The reaction temperature and the choice of organic SDA affect the type of structures being produced.

The crystallization of ZSM-39 in …

Reactivity Of Dimethylplatinum(Ii) Complexes With Peroxides, Kyle R. Pellarin

Electronic Thesis and Dissertation Repository

This thesis describes a study of dimethylplatinum(II) complexes containing bidentate nitrogen donor ligands. This work deals with the oxidative addition of peroxides and focuses on synthesis, characterization and reaction mechanisms of these complexes.

Dimethylplatinum(II) complexes were reacted with oxidants dimethyldioxirane (DMDO), meta-chloroperbenzoic acid (m-CPBA) and phthaloyl peroxide. The use of these oxidants has allowed for the synthesis of novel platinum(IV) complexes by oxidative addition and the formation of unique supramolecular networks. The formation of both trans- and cis-oxidative addition products was controlled by the type of oxidant utilized. By varying the ligand design of the …

Reactions Of Platinum Complexes With Dimethylamine-Borane, Shawn M. Robinson

Electronic Thesis and Dissertation Repository

This thesis describes a study of the reactions of platinum complexes with dimethylamine-borane (DMAB) as models for alkane activation. It is concluded that sigma-borane complexes of platinum(II) or platinum(IV) will be difficult to synthesize or even to detect as intermediates in hydride transfer from boranes to platinum.

The complex [PtMe(O₂CCF₃)(bpy)] reacts with DMAB to form an intermediate [PtMeH(bpy)] complex, which undergoes reductive elimination of methane with further degradation to give platinum(0) and free 2,2’-bipyridine. The addition of methyl acrylate to the reaction allowed the trapping of the platinum-hydride, producing [PtCl(CHMeCO₂Me)(bpy)] and [Pt(CHMeCO₂Me) …

Surface Functionalized Water-Dispersible Magnetite Nanoparticles: Preparation, Characterization And The Studies Of Their Bioapplications, Haiou Qu

University of New Orleans Theses and Dissertations

Iron oxide magnetic nanoparticle synthesis and their surface functionalization hold a crucial position in the design and fabrication of functional materials for a variety of biomedical applications. Non-uniform nanoparticles with poor crystallinity, prepared by conventional methods, have only limited value in biological areas. Large scale synthesis methods that are able to produce high quality, mono-dispersed iron oxide nanoparticles using low cost and environment friendly chemicals are highly desirable. Following synthesis, appropriate surface functionalization is necessary to direct the dispersibility of nanoparticles in aqueous solution in order to provide them with acceptable colloidal stability against the ion strength and many biomolecules …

The Synthesis And Characterization Of Novel Group 13 Nanostructured Building Block Heterogeneous Silicate Catalysts, Joshua G. Abbott

Doctoral Dissertations

A building block approach and sequential addition methodology were utilized to prepare heterogeneous silicate catalysts containing atomically dispersed group 13 metal (B, Al, Ga) centers. The octa(trimethyltin) silsequioxane, Si8[sub]O12[sub](OSnMe3[sub])8[sub], was used as the building block for the synthesis of these materials. Reaction of the building block with a variety of group 13 metal chlorides led to the formation of cross-linked matrices. All prepared materials were characterized by gravimetric analysis, gas absorption, IR, and NMR. In addition, aluminum and boron samples where characterized by 27[sup]Al and 11[sup]B solid state NMR, and gallium samples were studied using x-ray absorption techniques.

Studies found …

Novel Single-Site Titanosilicates With Targeted Connectivity And Nuclearity Of Titanium(Iv): Synthesis, Characterization And Catalytic Properties In Alkylphenol Oxidation, Nan Chen

Doctoral Dissertations

Titanosilicates are a family of porous materials that have shown excellent catalytic activity in olefin epoxidation and many other selective oxidation reactions. These materials have been extensively studied in the past few decades. One of the central questions in these investigations has been to define the catalytically active centers. The traditional synthesis of wet impregnation followed by calcination often produces more than one type of catalytic center within the same matrix, i.e. different coordination, connectivity and nuclearity. Each type potentially possesses unique catalytic activity. Co-existence of multiple catalytic centers makes it impossible to establish the relationship between the structure of …

Part I - A Study Of The Formation Of Carbenes By Elimination Of Α-Bromosilanes And Application Toward The Synthesis Of Transition Metal Complexed Quinone Methide Analogs. Part Ii - Development Of Novel 7-Membered Ring Carbene Ligands For Palladium Catalyzed Cross Coupling Reactions., Christian Michael Loeschel

Graduate Theses and Dissertations

In part I, we wish to report our approaches toward transition metal complexed ortho-quinone methide analogs. ortho-Quinone Methides are a class of highly reactive compounds with a wide range of chemical and biological applications. Previously, a stable iron complexed benzannulated 5-membered ring quinone methide analog was reported by Allison and Neal27. Herein, we report our approaches to improve the reactivity of that system by removing benzannulation as well as changing the metal from iron to manganese and rhenium.

Furthermore, a methodological study on generating carbenes under mild conditions by elimination of α-halosilanes and its application towards metal complexed quinone methide …

Reactions Of Methyl Perfluoroalkyl Ethers With Isopropyl Alcohol: Experimental And Theoretical Studies, Howard Knachel, Vladimir Benin, Chadwick Barklay, Janine C. Birkbeck, Billy D. Faubion, William E. Moddeman

Chemistry Faculty Publications

The reaction of an isomeric mixture of the methyl perfluoroalkyl ether, C4F9OCH3 (Novec-7100), in the presence of isopropyl alcohol (IPA) and/or water has been studied by measuring the rate of product formation using an ion-selective electrode (ISE) for fluoride ion, Karl Fisher coulometric titrations for water, and 1H and 19F NMR spectroscopy for product identification and rate studies. The results showed the methyl perfluoroalkyl ether to be very stable with products forming at the rate of ∼1 ppm per year at a laboratory temperature of 20 °C. Measurements over the temperature range of 6° to 100 °C were made on …

Interaction Of Human Telomeric Dna With N-Methyl Mesoporphyrin Ix, John Michael Nicoludis , '12, Steven Paul Barrett , '13, J.-L. Mergny, Liliya A. Yatsunyk

Chemistry & Biochemistry Faculty Works

The remarkable selectivity of N-methyl mesoporphyrin IX (NMM) for G-quadruplexes (GQs) is long known, however its ability to stabilize and bind GQs has not been investigated in detail. Through the use of circular dichroism, UV-visible spectroscopy and fluorescence resonance energy transfer (FRET) melting assay we have shown that NMM stabilizes human telomeric DNA dAG(3)(TTAG(3))(3) (Tel22) and is selective for its parallel conformation to which it binds in 1:1 stoichiometry with a binding constant of similar to 1.0 x 10(5) M-1. NMM does not interact with an antiparallel conformation of Tel22 in sodium buffer and is the second example in the …

Hierarchy Of Supramolecular Synthons In The Of Design Multi-Component Crystals, Padmini Kavuru

USF Tampa Graduate Theses and Dissertations

Most of the biological systems in nature are sustained by molecular self-assemblies which are the finest examples of supramolecular architectures. Non-covalent interactions are key concepts which govern these molecular assemblies. Inspired by these examples crystal engineering emerged as an important tool in supramolecular chemistry which aids in the invention of new molecular structures with desired properties. Understanding of how the molecules interact at the molecular levels enables one to rationally design novel solid forms with modulated physicochemical properties. This feature of crystal engineering has heightened its position in materials chemistry and is currently one of the most well studied fields …

The Synthesis And Reactivity Of New Pnictogen(Iii) Cations, Allison L. Brazeau

Electronic Thesis and Dissertation Repository

Chelating nitrogen based ligands are well known for their use with transition metals while their chemistry with p-block elements has been relatively underdeveloped. This thesis examines the structure, bonding and reactivity of group 15 elements supported by a pyridyl tethered 1,2-bis(imino)acenaphthene (“clamshell”) and various homo- and heteroleptic guanidinate frameworks.

The unique “clamshell” ligand contains a pendant Lewis base and has been used to support N-heterocyclic phosphenium and arsenium cations. Reactivity studies with the phosphorus analogue demonstrate the ability of the ligand to act as a Lewis base, while the phosphorus centre provides a Lewis acidic site, showing the amphoteric …

Investigating The Electron Transport And Light Scattering Enhancement In Radial Core-Shell Metal-Metal Oxide Novel 3d Nanoarchitectures For Dye Sensitized Solar Cells, Gayatri Sahu

University of New Orleans Theses and Dissertations

Dye-sensitized solar cells (DSSCs) have attained considerable attention during the last decade because of the potential of becoming a low cost alternative to silicon based solar cells. Electron transport is one of the prominent processes in the cell and it is further a complex process because the transport medium is a mesoporous film. The gaps in the pores are completely filled by an electrolyte with high ionic strength, resulting in electron-ion interactions. Therefore, the electron transport in these so called state-of-the-art systems has a practical limit because of the low electron diffusion coefficient (D_n) in this mesoporous film …

The Itinerant Position Of Yttrium As Evidenced By Carboxylic Acid Extractions, Dustin C Collier

Doctoral Dissertations

The rare-earth elements Y and La-Lu share many similar physical and chemical properties. These similarities are reflected by the difficulty in the complete separation of the rare earths, often requiring hundreds to thousands of stages for the production of pure rare earths. Yttrium, traditionally known to be separated with Ho, has also been observed to be separated with other elements within the lanthanide series, and even outside the bounds of the lanthanide series itself. Previous publications by several authors have indicated that steric factors could influence the position of Y in solvent extractions of the rare earths using carboxylic acid …

The Synthesis And Characterization Of Novel Titanosilicates For Next Generation Hydrogen Storage, James R. Humble

Chancellor’s Honors Program Projects

No abstract provided.

Synthesis And Characterization Of Mesoporous Silica Membranes Modified By Atomic And Molecular Layer Deposition, David Emmett Cassidy

Electronic Theses and Dissertations

Inorganic membranes offer a means for chemical separations in a variety of applications including chemical processing, drug delivery systems, battery separators and fuel cells. There is currently a “pore size gap” in silica membranes between 1-2 nanometers. Synthesizing membranes with a fine control of the pore size and distribution within that gap is a significant challenge. This thesis reports findings on using atomic and molecular layer deposition as new synthesis approaches to controlling pore size and chemical functionality of silica membranes. Mesoporous silica membranes, prepared using surfactant-templates with pore diameters ~4nm, were modified using atomic layer deposition and molecular layer …

Synthesis, Structure, And Characterization Of Hybrid Solids Containing Polyoxometalates And Ruthenium Polypyridyl Complexes, Yanfen Ll

Masters Theses & Specialist Projects

Polyoxometalates (POMs), which are inorganic metal oxide cluster anions with discrete structures, have been extensively studied in recent years due to their large variety of applications such as medicine, biology, catalysis, material sciences and chemical analysis. Ruthenium polypyridyl complexes have been extensively studied for their applications as photosensitizers in solar energy conversion and photoelectronic materials. Recently, ruthenium heterocyclic ligand complex-based building blocks have been used for the synthesis of hybrid organic-inorganic solids through the self-assembly. We are interested in the synthesis of ruthenium polypyridyl complexes and polyoxometalate anions through different ways such as coordination bonds, hydrogen bonds and ionic bonds …

Structural Motifs Of Novel Metallothionein Proteins, Duncan E K Sutherland

Electronic Thesis and Dissertation Repository

Metallothioneins (MT) are a family of small cysteine rich proteins, which have been implicated in toxic metal detoxification, protection against oxidative stress, and as a metallochaperone. The most well studied member of the family is the mammalian MT, which consists of two domains: a β-domain with 9 cysteine residues, which sequesters 3 Cd²⁺/Zn²⁺, and an α-domain with 11 cysteine residues, which sequesters 4 Cd²⁺/Zn²⁺. The exact functions of MT are unknown but must relate to its metalation status. Several areas that could lead to the assignment of function include 1) the determination …

Solid-State Nuclear Magnetic Resonance Spectroscopy Of Unreceptive Quadrupolar Nuclei In Inorganic Materials, Andre Sutrisno

Electronic Thesis and Dissertation Repository

Preparation and characterization of inorganic materials is a crucial practice because understanding the relationship between structure and property is important for improving current performance and developing novel materials. Many metal centers in technologically and industrially important materials are unreceptive low-γ quadrupolar nuclei (i.e., possessing low natural abundance, low NMR frequencies and large quadrupole moments) and they usually give rise to very broad NMR resonances and low signal-to-noise ratios, making it difficult to acquire their solid-state NMR spectra. This thesis focuses on the characterization of inorganic materials using solid-state NMR (SSNMR) spectroscopy at very high magnetic field of …

Vaporization And Sublimation Enthalpies Of Acetanilide And Several Derivatives By Correlation Gas Chromatography, Patamaporn Umnahanant, James Chickos

James Chickos

No abstract provided.

Synthesis And Characterization Of Iron(Ii) Complexes Modeling The Active Site Structure Of Nonheme Iron Dioxygenases, Jacob Baus

Master's Theses (2009 -)

The aerobic degradation of polycyclic aromatic compounds, which are widespread contaminants in soils and groundwaters, is carried-out in large part by various Fe-containing dioxygenases that perform the cis-dihydroxylation and oxidative cleavage of aromatic rings. Recently, a new Fe dioxygenase family emerged that catalyzes a remarkable set of transformations; the distinguishing feature of these enzymes is that their monoiron(II) centers are coordinated by three histidines residues (i.e., imidazole ligands) in a facial geometry - a departure from the "canonical" 2-histidine-1-carboxylate facial triad that is dominant among nonheme monoiron enzymes. Members of the "3His family" are capable of oxidatively cleaving C-C bonds …

Optical And Electrochemical Sensors For The Detection Of Metal Ions And Nerve Gas Mimics Via Fluorescein And Coumarin Derivatives, Fasil Adefris Abebe

Dissertations

Trace element detection of metals, for example, iron, Copper and zinc, are important in biological systems and in the environment. Many of us are aware that our cells contain metal ions that are “tied” up in proteins. However, chelatable or “free” trace elements can also be found in small quantities, and can have a negative impact on our bodies. Despite the increasing surge in developing sensors for metals and nerve gas agents, efficient detection still remains a challenge. Among the various sensors developed so far, fluorescence sensors play an important role due to their simplicity. I design fluorescein-based chemosensors for …