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Full-Text Articles in Chemistry

The 14N Quadrupole Coupling In Hexamethylene Triperoxide Diamine (Hmtd), John Persons, Gerard S. Harbison Aug 2007

The 14N Quadrupole Coupling In Hexamethylene Triperoxide Diamine (Hmtd), John Persons, Gerard S. Harbison

Gerard Harbison Publications

Using high-field NMR, we have determined the magnitude of the nuclear quadrupole interaction in hexamethylene triperoxide diamine (HMTD), the explosive allegedly used in the London bombings of July 2005. The experimental quadrupolar coupling constant, 5.334 MHz, is in good agreement with quantum chemical calculations. The predicted single zero-field transition frequency should lie in a relatively empty part of the 14N nuclear quadrupole resonance (NQR) spectrum; the spin relaxation rate is reasonably fast.


Mechanism Of Rate-Limiting Motions In Enzyme Function, Eric D. Watt, Hiroko Shimada, Evgueni Kovriguine, J. Patrick Loria Jul 2007

Mechanism Of Rate-Limiting Motions In Enzyme Function, Eric D. Watt, Hiroko Shimada, Evgueni Kovriguine, J. Patrick Loria

Chemistry Faculty Research and Publications

The ability to use conformational flexibility is a hallmark of enzyme function. Here we show that protein motions and catalytic activity in a RNase are coupled and display identical solvent isotope effects. Solution NMR relaxation experiments identify a cluster of residues, some distant from the active site, that are integral to this motion. These studies implicate a single residue, histidine-48, as the key modulator in coupling protein motion with enzyme function. Mutation of H48 to alanine results in loss of protein motion in the isotope-sensitive region of the enzyme. In addition, k cat decreases for this mutant and the kinetic …


Slow Turning Reveals Enormous Quadrupolar Interactions (Streaqi), John Persons, Gerard S. Harbison Apr 2007

Slow Turning Reveals Enormous Quadrupolar Interactions (Streaqi), John Persons, Gerard S. Harbison

Gerard Harbison Publications

We introduce a new solid-state NMR method, which uses very slow sample rotation to visualize NMR spectra whose width exceeds feasible spectrometer bandwidths. It is based on the idea that if we reorient a tensor by a known angle about a known axis, the shifts in the NMR frequencies observed across the spectral width allow us to reconstruct the entire tensor. Called STREAQI (Slow Turning Reveals Enormous Anisotropic Quadrupolar Interactions), this method allows us to probe NMR nuclei that are intractable to current methods. To prove the concept and demonstrate its promise we have implemented the method for several 79Br …


Solution Conformations Of Three Small Cluster Oligosaccharide Mimetics (Scom) From D-Glucosamine, D-Altrosamine, And (-)-Quinic Acid, Q. L. Nguyen, L. Olmstead, S. Bains, Andreas H. Franz Jan 2007

Solution Conformations Of Three Small Cluster Oligosaccharide Mimetics (Scom) From D-Glucosamine, D-Altrosamine, And (-)-Quinic Acid, Q. L. Nguyen, L. Olmstead, S. Bains, Andreas H. Franz

College of the Pacific Faculty Articles

Three small cluster oligosaccharide mimetics were synthesized, and their CDCl3 solution conformations were determined with NMR experiments. In this paper, we confirmed conformational similarities in rings A and B in all three compounds, and we provide the overall solution geometries. In all cases, an unusual cyclohexane twist-boat conformation with longrange 4 J-(W)-coupling was observed. The origin of the bias towards the twist-boat was attributed primarily to the fused ring system between the cyclohexane ring and the dioxacyclopentane (acetal) including hydrogen bonding. Temperature-annealed molecular dynamics simulations complemented the NMR experiments and supported the overall assignment.


Synthesis And Characterisation Of Tetra-Tetrazole Macrocycles, Andrew Bond, Adrienne Fleming, Fintan Kelleher, John Mcginley, Vipa Prajapati, Signe Skovsgaard Jan 2007

Synthesis And Characterisation Of Tetra-Tetrazole Macrocycles, Andrew Bond, Adrienne Fleming, Fintan Kelleher, John Mcginley, Vipa Prajapati, Signe Skovsgaard

Articles

The syntheses of tetra-tetrazole macrocycles, containing two bis-tetrazole units linked by a variety of alkyl chain lengths from four to eight carbons, are described. The crystal structures of three of these derivatives are reported, and the molecular conformation in the solid state is compared to that of one previously reported tetra-tetrazole macrocycle and to other bis- and tris(tetrazole)benzene structures. The macrocycle conformation is influenced by the length of the alkyl chain linker, the relative orientation of the tetrazole rings on the benzene ring, and by intermolecular interactions. In the macrocycles based on 1,2-bis(tetrazole)benzene, the adjacent tetrazole rings on the benzene …