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Applied Mathematics Commons

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Full-Text Articles in Applied Mathematics

Aspects Of Stochastic Geometric Mechanics In Molecular Biophysics, David Frost Dec 2023

Aspects Of Stochastic Geometric Mechanics In Molecular Biophysics, David Frost

All Dissertations

In confocal single-molecule FRET experiments, the joint distribution of FRET efficiency and donor lifetime distribution can reveal underlying molecular conformational dynamics via deviation from their theoretical Forster relationship. This shift is referred to as a dynamic shift. In this study, we investigate the influence of the free energy landscape in protein conformational dynamics on the dynamic shift by simulation of the associated continuum reaction coordinate Langevin dynamics, yielding a deeper understanding of the dynamic and structural information in the joint FRET efficiency and donor lifetime distribution. We develop novel Langevin models for the dye linker dynamics, including rotational dynamics, based …


Applying The Data: Predictive Analytics In Sport, Anthony Teeter, Margo Bergman Nov 2020

Applying The Data: Predictive Analytics In Sport, Anthony Teeter, Margo Bergman

Access*: Interdisciplinary Journal of Student Research and Scholarship

The history of wagering predictions and their impact on wide reaching disciplines such as statistics and economics dates to at least the 1700’s, if not before. Predicting the outcomes of sports is a multibillion-dollar business that capitalizes on these tools but is in constant development with the addition of big data analytics methods. Sportsline.com, a popular website for fantasy sports leagues, provides odds predictions in multiple sports, produces proprietary computer models of both winning and losing teams, and provides specific point estimates. To test likely candidates for inclusion in these prediction algorithms, the authors developed a computer model, and test …


Using Modern Portfolio Theory To Analyze Virgil's Aeneid (Or Any Other Poem), David Patterson May 2020

Using Modern Portfolio Theory To Analyze Virgil's Aeneid (Or Any Other Poem), David Patterson

Master's Theses

This paper demonstrates that it is possible to use mathematics to study literature as it has been used to study the social sciences. By focusing on mathematically defining economic and literary terms, it can be shown that the underlying mathematical structure behind key concepts in economics and literature are analogous. This opens the possibility of applying economic models in literature. Specifically, it is demonstrated that the economic mathematical model of modern portfolio theory can answer long standing questions around the Roman epic Aeneid by Virgil. The poet died before completing his poem. The relative completeness of the books of the …


The Martingale Approach To Financial Mathematics, Jordan M. Rowley Jun 2019

The Martingale Approach To Financial Mathematics, Jordan M. Rowley

Master's Theses

In this thesis, we will develop the fundamental properties of financial mathematics, with a focus on establishing meaningful connections between martingale theory, stochastic calculus, and measure-theoretic probability. We first consider a simple binomial model in discrete time, and assume the impossibility of earning a riskless profit, known as arbitrage. Under this no-arbitrage assumption alone, we stumble upon a strange new probability measure Q, according to which every risky asset is expected to grow as though it were a bond. As it turns out, this measure Q also gives the arbitrage-free pricing formula for every asset on our market. In …


Thinking Poker Through Game Theory, Damian Palafox Jun 2016

Thinking Poker Through Game Theory, Damian Palafox

Electronic Theses, Projects, and Dissertations

Poker is a complex game to analyze. In this project we will use the mathematics of game theory to solve some simplified variations of the game. Probability is the building block behind game theory. We must understand a few concepts from probability such as distributions, expected value, variance, and enumeration methods to aid us in studying game theory. We will solve and analyze games through game theory by using different decision methods, decision trees, and the process of domination and simplification. Poker models, with and without cards, will be provided to illustrate optimal strategies. Extensions to those models will be …


Constructing Phylogenetic Trees Using Maximum Likelihood, Anna Cho Apr 2012

Constructing Phylogenetic Trees Using Maximum Likelihood, Anna Cho

Scripps Senior Theses

Maximum likelihood methods are used to estimate the phylogenetic trees for a set of species. The probabilities of DNA base substitutions are modeled by continuous-time Markov chains. We use these probabilities to estimate which DNA bases would produce the data that we observe. The topology of the tree is also determined using base substitution probabilities and conditional likelihoods. Felsenstein [2] introduced this method of finding an estimate for the maximum likelihood phylogenetic tree. We will explore this method in detail in this paper.


Football: An Intransitive Endeavour, Joe Walsh, Ian Timothy Heazlewood Jan 2011

Football: An Intransitive Endeavour, Joe Walsh, Ian Timothy Heazlewood

Joe Walsh

It has long been established that competitions should be structured to give each team a fair chance of winning. The aim of this research paper was, considering similarities of shared parameters between codes, to investigate intransitivity in football codes. Variables effecting probabilistic outcomes of games were identified for the football codes: soccer, gridiron, rugby union, rugby league and touch football. An algebraic probabilistic model for obtaining tactical advantage in individual transition states was developed. Hypothetical teams were constructed in order to test the possibility of intransitive games states. It was clear that intransitivity could logically exist for a variety of …