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Graphical models

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Full-Text Articles in Physical Sciences and Mathematics

Adarl: What, Where, And How To Adapt In Transfer Reinforcement Learning, Biwei Huang, Fan Feng, Chaochao Lu, Sara Magliacane, Kun Zhang Jan 2022

Adarl: What, Where, And How To Adapt In Transfer Reinforcement Learning, Biwei Huang, Fan Feng, Chaochao Lu, Sara Magliacane, Kun Zhang

Machine Learning Faculty Publications

One practical challenge in reinforcement learning (RL) is how to make quick adaptations when faced with new environments. In this paper, we propose a principled framework for adaptive RL, called AdaRL, that adapts reliably and efficiently to changes across domains with a few samples from the target domain, even in partially observable environments. Specifically, we leverage a parsimonious graphical representation that characterizes structural relationships over variables in the RL system. Such graphical representations provide a compact way to encode what and where the changes across domains are, and furthermore inform us with a minimal set of changes that one has …


Development Of A Framework To Support Informed Shipbuilding Based On Supply Chain Disruptions, Katherine Smith, Rafael Diaz, Yuzhong Shen Jan 2022

Development Of A Framework To Support Informed Shipbuilding Based On Supply Chain Disruptions, Katherine Smith, Rafael Diaz, Yuzhong Shen

VMASC Publications

In addition to stresses induced by the Covid-19 pandemic, supply chains worldwide have been growing more complex while facing a continuous onslaught of disruptions. This paper presents an analysis and extension of a graph based model for modeling and simulating the effects of such disruptions. The graph based model combines a Bayesian network approach for simulating risks with a network dependency analysis approach for simulating the propagation of disruptions through the network over time. The initial analysis provides evidence supporting extension to for using a multi-layered approach allowing for the inclusion of cyclic features in supply chain models. Initial results …


Learning With Aggregate Data, Tao Sun Mar 2019

Learning With Aggregate Data, Tao Sun

Doctoral Dissertations

Various real-world applications involve directly dealing with aggregate data. In this work, we study Learning with Aggregate Data from several perspectives and try to address their combinatorial challenges. At first, we study the problem of learning in Collective Graphical Models (CGMs), where only noisy aggregate observations are available. Inference in CGMs is NP- hard and we proposed an approximate inference algorithm. By solving the inference problems, we are empowered to build large-scale bird migration models, and models for human mobility under the differential privacy setting. Secondly, we consider problems given bags of instances and bag-level aggregate supervisions. Specifically, we study …


Comparison Mining From Text, Maksim Tkachenko Dec 2018

Comparison Mining From Text, Maksim Tkachenko

Dissertations and Theses Collection (Open Access)

Online product reviews are important factors of consumers' purchase decisions. They invade more and more spheres of our life, we have reviews on books, electronics, groceries, entertainments, restaurants, travel experiences, etc. More than 90 percent of consumers read online reviews before they purchase products as reported by various consumers surveys. This observation suggests that product review information enhances consumer experience and helps them to make better-informed purchase decisions. There is an enormous amount of online reviews posted on e-commerce platforms, such as Amazon, Apple, Yelp, TripAdvisor. They vary in information and may be written with different experiences and preferences.

If …


Modeling Association In Microbial Communities With Clique Loginear Models, Adrian Dobra, Camilo Valdes, Dragana Ajdic, Bertrand S. Clarke, Jennifer Clarke Nov 2018

Modeling Association In Microbial Communities With Clique Loginear Models, Adrian Dobra, Camilo Valdes, Dragana Ajdic, Bertrand S. Clarke, Jennifer Clarke

Department of Mathematics: Faculty Publications

There is a growing awareness of the important roles that microbial communities play in complex biological processes. Modern investigation of these often uses next generation sequencing of metagenomic samples to determine community composition. We propose a statistical technique based on clique loglinear models and Bayes model averaging to identify microbial components in a metagenomic sample at various taxonomic levels that have significant associations. We describe the model class, a stochastic search technique for model selection, and the calculation of estimates of posterior probabilities of interest. We demonstrate our approach using data from the Human Microbiome Project and from a study …


The Graph Database: Jack Of All Trades Or Just Not Sql?, George F. Hurlburt, Maria R. Lee, George K. Thiruvathukal Jan 2018

The Graph Database: Jack Of All Trades Or Just Not Sql?, George F. Hurlburt, Maria R. Lee, George K. Thiruvathukal

George K. Thiruvathukal

This special issue of IT Professional focuses on the graph database. The graph database, a relatively new phenomenon, is well suited to the burgeoning information era in which we are increasingly becoming immersed. Here, the guest editors briefly explain how a graph database works, its relation to the relational database management system (RDBMS), and its quantitative and qualitative pros and cons, including how graph databases can be harnessed in a hybrid environment. They also survey the excellent articles submitted for this special issue.


The Graph Database: Jack Of All Trades Or Just Not Sql?, George F. Hurlburt, Maria R. Lee, George K. Thiruvathukal Nov 2017

The Graph Database: Jack Of All Trades Or Just Not Sql?, George F. Hurlburt, Maria R. Lee, George K. Thiruvathukal

Computer Science: Faculty Publications and Other Works

This special issue of IT Professional focuses on the graph database. The graph database, a relatively new phenomenon, is well suited to the burgeoning information era in which we are increasingly becoming immersed. Here, the guest editors briefly explain how a graph database works, its relation to the relational database management system (RDBMS), and its quantitative and qualitative pros and cons, including how graph databases can be harnessed in a hybrid environment. They also survey the excellent articles submitted for this special issue.


Towards Deeper Understanding In Neuroimaging, Rex Devon Hjelm Nov 2016

Towards Deeper Understanding In Neuroimaging, Rex Devon Hjelm

Computer Science ETDs

Neuroimaging is a growing domain of research, with advances in machine learning having tremendous potential to expand understanding in neuroscience and improve public health. Deep neural networks have recently and rapidly achieved historic success in numerous domains, and as a consequence have completely redefined the landscape of automated learners, giving promise of significant advances in numerous domains of research. Despite recent advances and advantages over traditional machine learning methods, deep neural networks have yet to have permeated significantly into neuroscience studies, particularly as a tool for discovery. This dissertation presents well-established and novel tools for unsupervised learning which aid in …


Profiling Social Media Users With Selective Self-Disclosure Behavior, Wei Gong Aug 2016

Profiling Social Media Users With Selective Self-Disclosure Behavior, Wei Gong

Dissertations and Theses Collection

Social media has become a popular platform for millions of users to share activities and thoughts. Many applications are now tapping on social media to disseminate information (e.g., news), to promote products (e.g., advertisements), to manage customer relationship (e.g., customer feedback), and to source for investment (e.g., crowdfunding). Many of these applications require user profile knowledge to select the target social media users or to personalize messages to users. Social media user profiling is a task of constructing user profiles such as demographical labels, interests, and opinions, etc., using social media data. Among the social media user profiling research works, …


Epistemological Databases For Probabilistic Knowledge Base Construction, Michael Louis Wick Mar 2015

Epistemological Databases For Probabilistic Knowledge Base Construction, Michael Louis Wick

Doctoral Dissertations

Knowledge bases (KB) facilitate real world decision making by providing access to structured relational information that enables pattern discovery and semantic queries. Although there is a large amount of data available for populating a KB; the data must first be gathered and assembled. Traditionally, this integration is performed automatically by storing the output of an information extraction pipeline directly into a database as if this prediction were the ``truth.'' However, the resulting KB is often not reliable because (a) errors accumulate in the integration pipeline, and (b) they persist in the KB even after new information arrives that could rectify …


Learning With Joint Inference And Latent Linguistic Structure In Graphical Models, Jason Narad Mar 2015

Learning With Joint Inference And Latent Linguistic Structure In Graphical Models, Jason Narad

Doctoral Dissertations

Constructing end-to-end NLP systems requires the processing of many types of linguistic information prior to solving the desired end task. A common approach to this problem is to construct a pipeline, one component for each task, with each system's output becoming input for the next. This approach poses two problems. First, errors propagate, and, much like the childhood game of "telephone", combining systems in this manner can lead to unintelligible outcomes. Second, each component task requires annotated training data to act as supervision for training the model. These annotations are often expensive and time-consuming to produce, may differ from each …


Polyhedral Problems In Combinatorial Convex Geometry, Liam Solus Jan 2015

Polyhedral Problems In Combinatorial Convex Geometry, Liam Solus

Theses and Dissertations--Mathematics

In this dissertation, we exhibit two instances of polyhedra in combinatorial convex geometry. The first instance arises in the context of Ehrhart theory, and the polyhedra are the central objects of study. The second instance arises in algebraic statistics, and the polyhedra act as a conduit through which we study a nonpolyhedral problem.

In the first case, we examine combinatorial and algebraic properties of the Ehrhart h*-polynomial of the r-stable (n,k)-hypersimplices. These are a family of polytopes which form a nested chain of subpolytopes within the (n,k)-hypersimplex. We show that a well-studied unimodular triangulation of the (n,k)-hypersimplex restricts to a …


Causal Discovery For Relational Domains: Representation, Reasoning, And Learning, Marc Maier Nov 2014

Causal Discovery For Relational Domains: Representation, Reasoning, And Learning, Marc Maier

Doctoral Dissertations

Many domains are currently experiencing the growing trend to record and analyze massive, observational data sets with increasing complexity. A commonly made claim is that these data sets hold potential to transform their corresponding domains by providing previously unknown or unexpected explanations and enabling informed decision-making. However, only knowledge of the underlying causal generative process, as opposed to knowledge of associational patterns, can support such tasks. Most methods for traditional causal discovery—the development of algorithms that learn causal structure from observational data—are restricted to representations that require limiting assumptions on the form of the data. Causal discovery has almost exclusively …


Scaling Mcmc Inference And Belief Propagation To Large, Dense Graphical Models, Sameer Singh Aug 2014

Scaling Mcmc Inference And Belief Propagation To Large, Dense Graphical Models, Sameer Singh

Doctoral Dissertations

With the physical constraints of semiconductor-based electronics becoming increasingly limiting in the past decade, single-core CPUs have given way to multi-core and distributed computing platforms. At the same time, access to large data collections is progressively becoming commonplace due to the lowering cost of storage and bandwidth. Traditional machine learning paradigms that have been designed to operate sequentially on single processor architectures seem destined to become obsolete in this world of multi-core, multi-node systems and massive data sets. Inference for graphical models is one such example for which most existing algorithms are sequential in nature and are difficult to scale …


Hierarchical Graphical Bayesian Models In Psychology, Guillermo Campitelli, Guillermo Macbeth Jan 2014

Hierarchical Graphical Bayesian Models In Psychology, Guillermo Campitelli, Guillermo Macbeth

Research outputs 2014 to 2021

The improvement of graphical methods in psychological research can promote their use and a better comprehension of their expressive power. The application of hierarchical Bayesian graphical models has recently become more frequent in psychological research. The aim of this contribution is to introduce suggestions for the improvement of hierarchical Bayesian graphical models in psychology. This novel set of suggestions stems from the description and comparison between two main approaches concerned with the use of plate notation and distribution pictograms. It is concluded that the combination of relevant aspects of both models might improve the use of powerful hierarchical Bayesian graphical …


Traffic Analytics Using Probabilistic Graphical Models Enhanced With Knowledge Bases, Pramod Anantharam, Krishnaprasad Thirunarayan, Amit P. Sheth Jan 2013

Traffic Analytics Using Probabilistic Graphical Models Enhanced With Knowledge Bases, Pramod Anantharam, Krishnaprasad Thirunarayan, Amit P. Sheth

Kno.e.sis Publications

Graphical models have been successfully used to deal with uncertainty, incompleteness, and dynamism within many domains. These models built from data often ignore preexisting declarative knowledge about the domain in the form of ontologies and Linked Open Data (LOD) that is increasingly available on the web. In this paper, we present an approach to leverage such 'top-down' domain knowledge to enhance 'bottom-up' building of graphical models. Specifically, we propose three operations on the graphical model structure to enrich it with nodes, edges, and edge directions. We illustrate the enrichment process using traffic data from 511.org and declarative knowledge from ConceptNet. …


Relational Dependency Networks, Jennifer Neville Jan 2007

Relational Dependency Networks, Jennifer Neville

Computer Science Department Faculty Publication Series

Recent work on graphical models for relational data has demonstrated significant improvements in classification and inference when models represent the dependencies among instances. Despite its use in conventional statistical models, the assumption of instance independence is contradicted by most relational datasets. For example, in citation data there are dependencies among the topics of a paper’s references, and in genomic data there are dependencies among the functions of interacting proteins. In this paper, we present relational dependency networks (RDNs), graphical models that are capable of expressing and reasoning with such dependencies in a relational setting. We discuss RDNs in the context …


Corrective Feedback And Persistent Learning For Information Extraction, Aron Culotta, Trausti Kristjansson, Andrew Mccallum, Paul Viola Jan 2006

Corrective Feedback And Persistent Learning For Information Extraction, Aron Culotta, Trausti Kristjansson, Andrew Mccallum, Paul Viola

Andrew McCallum

To successfully embed statistical machine learning models in real world applications, two post-deployment capabilities must be provided: (1) the ability to solicit user corrections and (2) the ability to update the model from these corrections. We refer to the former capability as corrective feedback and the latter as persistent learning. While these capabilities have a natural implementation for simple classification tasks such as spam filtering, we argue that a more careful design is required for structured classification tasks. One example of a structured classification task is information extraction, in which raw text is analyzed to automatically populate a database. In …


Using Agents For Unification Of Information Extraction And Data Mining, Sharjeel Imtiaz, Azmat Hussain, Dr. Sikandar Hiyat Aug 2005

Using Agents For Unification Of Information Extraction And Data Mining, Sharjeel Imtiaz, Azmat Hussain, Dr. Sikandar Hiyat

International Conference on Information and Communication Technologies

Early work for unification of information extraction and data mining is motivational and problem stated work. This paper proposes a solution framework for unification using intelligent agents. A Relation manager agent extracted feature with cross feedback approach and also provide a Unified Undirected graphical handle. An RPM agent an approach to minimize loop back proposes pooling and model utilization with common parameter for both text and entity level abstractions.


Group And Topic Discovery From Relations And Text, Xuerui Wang, Natasha Mohanty, Andrew Mccallum Jan 2005

Group And Topic Discovery From Relations And Text, Xuerui Wang, Natasha Mohanty, Andrew Mccallum

Andrew McCallum

We present a probabilistic generative model of entity relationships and textual attributes that simultaneously discovers groups among the entities and topics among the corresponding text. Block-models of relationship data have been studied in social network analysis for some time. Here we simultaneously cluster in several modalities at once, incorporating the words associated with certain relationships. Significantly, joint inference allows the discovery of groups to be guided by the emerging topics, and vice-versa. We present experimental results on two large data sets: sixteen years of bills put before the U.S. Senate, comprising their corresponding text and voting records, and 43 years …