Physical Sciences and Mathematics Commons^™

The Vezo Communities And Fisheries Of The Coral Reef Ecosystem In The Bay Of Ranobe, Madagascar, Shane Abeare

University of New Orleans Theses and Dissertations

Madagascar, a country whose extraordinary levels of endemism and biodiversity are celebrated globally by scientists and laymen alike, yet historically has received surprisingly little research attention, is the setting of the present dissertation. Here, I contribute to the need for applied research by: 1) focusing on the most intensely fished section of the Toliara Barrier Reef, the Bay of Ranobe; 2) characterizing the marine environment, the human population, and the fisheries; and 3) collecting the longest known time-series of data on fisheries of Madagascar, thereby providing a useful baseline for future analyses. In Chapter 1, the bathymetry of the Bay …

On The Frontlines - The Fishermen Of Ibrahim Hyderi, Muhammad Haris Aslam Khan

MSJ Capstone Projects

Climate change has become a matter of recent debate for much of the world. According to a report published by a German watch, a non-governmental organization, in 2019, Pakistan among the five countries at severe risk of climate change disasters.

During the last two decades, Pakistan saw more than 141 extreme climatic catastrophes. Only in 2016, more than 566 people died due to these conditions.

A report published by Asian Development Bank in 2017 indicates Pakistan’s climate change profile. It states that more than 1,600 people have lost their lives in the super flood of 2010 alone. A loss of …

The Role Of Multi-Charged Responses: Construction And Application Of A Tandem Differential Mobility Analyzer (Tdma), Christopher Ray Oxford

McKelvey School of Engineering Theses & Dissertations

Atmospheric aerosols impact health outcomes, visibility, and the energy balance of the earth. The atmosphere contains a variety of compounds, and the volatility (phase change enthalpy and vapor pressure) of each compound determines its partitioning between the gas phase and the particle phase. The hygroscopicity (an aerosol’s affinity for water) of an atmospheric aerosol particle is determined by the many compounds present in the particle, and thus, the volatility impacts hygroscopicity. Changes in hygroscopicity alter the fraction of the aerosol deposited in the lungs and the fraction of the aerosol activated into cloud droplets. Thus, understanding the volatility and hygroscopicity …

Pre-Juvenile Naked Goby (Gobiosoma Bosc) Age And Growth, Annamaria Deitz, Juliana Harding

Honors Theses

Due to the abundance of larval naked gobies, Gobiosoma bosc, within the estuarine ichthyoplankton, it is important to understand their age and growth. Naked gobies are a largely distributed, both geographically and within an estuary, small, benthic fish species. There are 3 pairs of otoliths, calcium carbonate structures within the ear canal, that detect vibrations and record the age of the fish, both daily and annually. Using laboratory-reared gobies of a known age (Tremont et al. 2015), daily signatures on the sagittal otoliths were first validated to be daily, then a growth curve for the wild caught larvae was …

A Risk Analysis Of Microplastic Consumption In Filter Feeders, Sheri Rahman

HCNSO Student Capstones

Microplastics (plastic particles < 5 mm) pose a serious threat to marine organisms, as researchers have documented such particles in the gut contents of numerous species. In particular, filter feeders are at risk of consuming microplastics because they may accidentally consume the particulates when feeding or they may prey on species that have already consumed them. The goals of this research were to evaluate the risks that different filter feeders face in regards to microplastic consumption through the analysis of the calculated Microplastic Consumption Rates for numerous species of filter feeders. Factors that could potentially affect this risk were also considered, including ocean basin, environment type, salinity, life stage, IUCN status, and filtration technique. Initial analysis showed that body size greatly impacted a species’ risk of microplastic consumption and further tests were completed to evaluate overall microplastic contamination for each species. Microplastic consumption and microplastic contamination values were evaluated and analyzed to determine which filter feeding species were most at risk of experiencing ecological effects from microplastic pollution. From a resource management perspective, this research highlights the filter feeding species most at risk, contributing to the development of more effective plastic waste management policies.

Arctic Thaw: Environmental Exploitation For Economic Profit, Stephen F. Moulton

HCNSO Student Capstones

“Arctic Thaw: Environmental Exploitation for Economic Profit,” is a comprehensive, interdisciplinary assessment of Arctic climate change (CC) impacts. Arctic CC alters the regions’ temperature, annual ice cover, and sea levels. This alteration influences the global economy through enriched international trade and fossil hydrocarbon extraction developments. This capstone examines the Arctic’s response to CC through economic statistical analysis, tracking relative sea-level (RSL) trends, as well as performing hydrographic and modeling reviews. The Northern Rim Countries (NRCs) economic analysis assesses potential CC and GSLR impacts by applying statistical techniques to calculate its effect on each country’s gross domestic product (GDP). The tidal …

Spatial And Temporal Trends Of Southeastern Florida's Octocoral Comunity, Alexandra Hiley

HCNSO Student Theses and Dissertations

In the Caribbean, local and global stressors have driven significant declines in scleractinian coral cover up to 80% in only three decades. Following these declines, phase shifts in benthic community composition have been reported. Shifts towards macroalgal dominance has been the most widely observed case, however, shifts towards octocoral and sponge dominance have also been reported. In Florida, USA, the Florida Reef Tract is an extensive barrier reef system that contains diverse assemblages of corals, sponges, fish, and other taxa. The Southeast Florida Reef Tract (SEFRT) within the Southeast Florida Coral Reef Conservation Area is the northern portion of this …

Barrier Layer Impact On Rapid Intensification Of Hurricanes (2000-2018) In The Atlantic Ocean, J. Gaston Hayworth

HCNSO Student Capstones

Hurricane prediction is an evolving challenge that has seen much improvement over the years. While hurricane models have improved in predicting the path of storms, forecasts of hurricane intensity are unreliable due to the complexity of environmental data, lack of understanding of how relative humidity, vertical wind shear, hurricane structure and other possible factors affect intensity. Rapid Intensification (RI), which is a wind speed increase of +30 kts over a 24-hr period, can contribute to major destruction and loss of life to coastal communities affected by hurricanes, and is especially difficult to predict. Given the continued development of coastal regions …

Raman-Scatter Lidar Measurements Of Water Vapor Determined Using An Integrated Microwave Radiometer-Lidar Retrieval, Jeffrey Vankerkhove

Electronic Thesis and Dissertation Repository

Water vapor plays a crucially important role in many atmospheric processes. However, it is poorly characterized in much of the atmosphere. Vibrational Raman-scattering Lidar has excellent spatial and temporal resolution, but requires an external calibration to correct for instrumental biases. Microwave Radiometers have poorer resolution, but can be calibrated absolutely and can be used to calibrate the Lidar system. I have implemented a new technique, incorporating both instruments to generate a calibrated water vapor mixing ratio profile. This integrated retrieval uses an inverse method which includes a combined forward model, integrating radiative transfer equations (Schroeder and Westwater 1991) and lidar …

Vertical, Thermal, And Geographic Habitats Of Whale Sharks (Rhincodon Typus) Tagged Along Ningaloo Reef, Western Australia, Rachel Steinberg

Theses

Though whale sharks (Rhincodon typus) are the largest fish in the ocean there is little known about the species’ life history. Juvenile males are often observed at a number of locations world-wide but adult females, adult males, and neonates are rarely seen. Consequently, important issues like where whale sharks mate and give birth are unknown. Similarly, what geographic and vertical habitats whale sharks use to forage in are similarly poorly known. Seventeen juvenile whale sharks (10 female, 7 male) were outfitted with satellite tags off Ningaloo Reef, Western Australia between 2003 and 2009, and subsequently monitored for 1920 …

Sargassum Infauna Community Structure In The Florida Straits And Gulf Stream, Dayna S. Hunn

HCNSO Student Theses and Dissertations

Community structure of Sargassum-associated organisms was examined from 11 sampling locations in the Florida Straits and Gulf Stream from May—September 2018 using a combination of modified shrimp trawls and dip nets. A total of 5413 organisms were collected from Sargassumhabitat representing 14 species from 10 families. A core group of organisms (Platynereis dumerilii, Litiopa melanostoma, Portunus sayi, Portunus spinimanus, Leander tenuicornis, and Latreutes fucorum) were found throughout the entirety of the geographic range surveyed. This core community was not found to vary significantly with increasing distance to shore (P=0.217) and latitude …

Characterization Of Bacterial Communities In Biscayne Bay Through Genomic Analysis, Eric Fortman

HCNSO Student Theses and Dissertations

Biscayne Bay is a shallow oligotrophic estuary in Southeast Florida. Channelization of rivers, and dredging of canals has greatly altered the historical flow of fresh water into the bay. This, coupled with the rise of a sprawling urban & suburban development, has greatly increased the nutrient load in the bay. This study examined the bacterial community at 14 stations throughout Biscayne Bay —6 stations were located at the mouths of canals; 1 upstream-canal station; 6 stations in the center of the bay; and one ocean influenced station, located near the entrance to the bay. One liter, surface water samples were …

Cytotoxicity And Mutagenicity Of Disinfection Byproduct Mixtures Formulated Using Free Chlorine And Monochloramine, Yonas Ghebremedhin

Graduate Theses and Dissertations

Bioassays have been used extensively to assess various toxicity endpoints of drinking water disinfection byproducts (DBPs), but an emphasis on single compounds prevails. In this research, DBP mixtures were assessed using a cytotoxicity test with Chinese Hamster Ovary (CHO) cells and an Ames fluctuation test with Salmonella typhimurium TA-98 and TA-100 with and without S9 rat liver homogenate. Seven whole mixture DBP concentrates were formulated using reconstituted natural organic matter (NOM) extracts from the Upper Mississippi River using scaled disinfectant dosing protocols with free chlorine and monochloramine in the presence and absence of added bromide. DBPs were identified by gas …

Histological Evidence Of Annual And Lunar Reproductive Rhythms Of Atlantic Sea Urchin, Arbacia Punctulata In The Gulf Of Mexico: Changes In Nutritive Phagocytes In Relation To Gametogenesis, Eleazar Hernandez Ii

Theses and Dissertations

Environmental phenomena such as temperature, photoperiod, tidal cycle, and lunar rhythm act as external cues that stimulate the reproductive activity of marine organisms. In this study, I report the annual and lunar reproductive cycles, and changes in nutritive phagocytes (NPs) in relation to gonadal maturation of Atlantic sea urchin (Arbacia punctulata, a primeval species). Monthly and weekly changes in gonadal development/maturation were observed histologically. In male, the testicular lobules were densely packed with sperm from June to August. In female, on the other hand, mature eggs first appeared in some ovaries in May, numerically increased from June to …

A Sinking Feeling: The Fate Of Concrete Pyramids Deployed In Artificial Reefs In The Texas Gulf Of Mexico, Cameron J. Moody

Theses and Dissertations

The deployment of 2,611 concrete pyramids in Texas gulf waters represents a significant undertaking. In collaboration with Texas Parks and Wildlife, bathymetric sidescan data was collected at three reefs hit by Hurricane Harvey from 2017 to 2019. All reefs lost significant pyramid height between 2017 and 2019. The pyramids demonstrated greater subsidence in the year when Harvey occurred and minimal subsidence the following year. Pyramids that moved outside the reefs were due to hurricane forces and shrimp trawl activity. Pyramids that remained inside the reef remained at their deployment location for two reefs. The pyramids remaining in the third reef …

Enabling High Quality Oxygen Measurements During Robotic Based Studies Of Ocean Ecological And Biogeochemical Processes, Brianna A. Alanis

Theses and Dissertations

Dissolved oxygen is an essential parameter necessary for understanding marine ecological and biogeochemical processes. New robotic vehicles and autonomous platforms are being applied to an even wider range of ecological and biogeochemical studies. Thus, arises the opportunity for matching the best possible oxygen sensing techniques and methods to these new platforms. In so doing, we can enable both more targeted and higher resolution oxygen measurements than previously possible and potentially use oxygen measurements for a wider range of applications, including in situ incubation experiments and primary productivity measurements. This thesis tested three different oxygen sensors in a trade study for …

Dna Barcoding Reveals Unexpected Diversity In Octocorallia In The Northwestern Gulf Of Mexico, Chelsea L. Pavliska

Theses and Dissertations

Coral reefs are an integral tier of marine ecosystems. They provide habitat and foraging opportunities for many ecologically and economically important fishes. Protection of coral reef biodiversity and connectivity is imperative to the continued health and sustainability of marine fisheries. Mesophotic reefs, such as those found in the northwest Gulf of Mexico, have unique coral communities because of the limited light penetration at mesophotic depths (30 – 150m). Because there is limited knowledge in regards to the biodiversity of coral reefs of the northwestern Gulf of Mexico (GOM), particularly the South Texas Banks (STBs), thesis work presented here aims to …

Participatory Modeling Of Tidal Circulation On Maine Mudflats To Improve Water Quality Management Of Shellfish Areas, Gabrielle V. Hillyer

Electronic Theses and Dissertations

Over the past decade, researchers have become increasingly aware of the vital role stakeholder knowledge plays in understanding complex social and environmental problems. Incorporating stakeholder knowledge into understanding complex problems allows for greater awareness and identification of community needs and can help build partnerships to support the development of applied research. In this thesis, I demonstrate the value of stakeholder knowledge and research partnerships by focusing on the soft-shell clamming industry in Maine and how a complex collaboration between clammers, municipal officials, representatives from state agencies, researchers, and other partners relied on and build adaptive capacity to address complex water …

The Role Of Sediment Resuspension In Estuarine Inorganic Nutrient Cycling, Kirsten Jo Ayres

Theses and Dissertations

Time-scaling of estuarine inorganic nitrogen cycling contains many assumptions due to biogeochemical interactions. Nitrogen, often a limiting factor for primary production, is transformed and utilized by many estuarine organisms. Inorganic nitrogen is especially high in porewater. High nutrient pore water, contained within the interstitial spaces of sediment, has been assumed to influx high concentrations of inorganic nutrients into surface waters during resuspension events. These short-term resuspension events rapidly introducing high concentration of nutrients into the water column. In order to determine the internal time scale of inorganic nitrogen cycling, a box-model nutrient budget, horizontal in situ transects, and vertical nutrient …

Establishing The Role Of The Mississippi-Alabama Barrier Islands In Mississippi Sound And Bight Circulation Using Observational Data Analysis And A Coastal Model, Laura Hode

Dissertations

The Mississippi-Alabama barrier islands restrict exchange between the Mississippi Sound and Mississippi Bight in the northern Gulf of Mexico. The islands also act as storm breaks for tropical cyclones, so their continued existence sustains marine ecosystems and protects coastal communities. However, the chain has undergone extensive segmentation, erosion, and westward migration in the past two hundred years. The islands are now more susceptible to further erosion (Pendleton et al., 2013; Morton, 2007). Additional reduction in island subaerial land extent would alter circulation in the Mississippi Sound and Bight.

Consequently, this study targeted the two most vulnerable barrier islands in the …

The Variability Of High-Frequency Motions And Their Interactions With The Mesoscale On The Mississippi Shelf, Jordan Earls

Master's Theses

In this study, we examine the spatial and temporal variability of high-frequency and low-frequency motions across the Mississippi Shelf and how the high-frequency motions are modulated by low-frequency mesoscale motions. For this purpose, we use Acoustic Doppler Current Profiler (ADCP) measurements collected at nearshore (23 m), mid-shelf (60 m), and shelf break (88 m) stations. High-frequency motions are defined as motions with periods less than 36 hours, whereas mesoscale motions have larger periods. The collected datasets are analyzed through bandpass filtering, least square harmonic analysis, spectral analysis, and empirical orthogonal functions (EOF). We find that along-shelf barotropic mesoscale motions contain …

Measurements And Synthetic Imaging Of Water Surface Gravity Waves Using Optical Techniques, Jennifer Closson

Theses and Dissertations

Remote sensing technologies are useful tools when gathering spatial and temporal information about dynamic coastal regions. A method is proposed using an in-situ space-time imaging technique for evaluating wave periods and wavelengths of surface water waves in shallow urban coastal water environments. Video imagery of shallow water waves was acquired using high definition video cameras. Video imagery records of surface water waves using staff gauges and simultaneously deployed targets were used to determine wave periods, wavelengths and wave amplitudes. Time series analyses is applied to the video derived time series. Wave energy spectrums are extracted and used to simulated synthetic …

Gut Content Analysis Of Benthic Foraging Fish Compared To Invertebrate Infauna Distributions In Dredged Vs. Undredged Habitats, Danielle Louise Juzwick

Theses and Dissertations

The Indian River Lagoon (IRL) has experienced a loss in seagrasses due to organic sediment accumulation and harmful algal blooms. Seagrasses are an essential nursery habitat for many fishes and benthic invertebrates. IRL fish known to utilize benthic habitat and feed on invertebrates include Atlantic croaker (Micropogonias undulates), juvenile Red Drum (Sciaenops ocellatus), and Mojarra (Eucinostomus spp.). The most abundant major infaunal taxa of the IRL are crustaceans, polychaetes, and mollusks. Environmental dredging in the IRL’s Turkey Creek is intended to improve water quality, remove harmful sediments and restore benthic habitat. Such dredging may impact benthic invertebrate populations and, indirectly, …

Identifying The N Sources For Black Mangrove (Avicennia Germinans) In A South Texas Mangrove Forest, Ashley Elizabeth Murphy

Theses and Dissertations

Black mangrove (Avicennia germinans) in south Texas provide ecosystem services and benefits to humans including: habitat for wildlife, prevention of coastline erosion, and mitigation of natural disasters. One step to preserve their ecological functions is to identify and protect the source of their nitrogen (N). Nitrogen stable isotopes were sampled for one year beginning August 2018 and used as tracers to identify how mangroves obtain N. Total N in (A. germinans) and associated (Batis maritima) (plants) (2.1%) was more abundant than in cyanobacteria (0.6%) and sediment (0.1%). Plant d15N signatures (5.52‰) were more similar to sediment (5.21‰) than cyanobacteria (1.98‰), …

Reconstructing Geographic And Trophic Histories Of Fish Using Bulk And Compound-Specific Stable Isotopes From Eye Lenses, Amy A. Wallace

USF Tampa Graduate Theses and Dissertations

The present research examined the viability and utility of eye lenses as a source of lifetime stable-isotope records in fish. It is presented in three sections. The first section compared bulk isotopic variation (bulk analysis) within fish eye-lenses at two temporal resolutions and compared patterns obtained from left and right eyes. The first temporal resolution was lower in an attempt to expose broad-scale isotopic changes during life while reducing effort and cost. This approach did reveal lifetime patterns, but tended to miss certain life events, particularly during early life. The second resolution was higher and provided detail that was missed …

Use Of Spectrofluorometry To Detect Petroleum Hydrocarbons In The Marine Environment, Mary Iris Abercrombie

USF Tampa Graduate Theses and Dissertations

The genesis of this research was the Deepwater Horizon oil spill, which discharged petroleum and gas into the Gulf of Mexico for 87 days in 2010. High-resolution fluorescence spectroscopy was employed for the detection of petroleum in seawater samples following the oil spill. Fluorescence arises from the chemical structure of π-bonding in C=C bonds, especially those in aromatic structures. Spectrofluorometry was also used to observe and track the formation of petroleum plumes in seawater undergoing controlled physical dispersion in a wave tank, both with and without the addition of chemical dispersant. Further, the changing fluorescence characteristics of a broad range …

Untapped Potential Of Gorgonian Octocorals For Detecting Environmental Change In Biscayne National Park, Florida, Usa, Selena A. Kupfner Johnson

USF Tampa Graduate Theses and Dissertations

One consequence of dramatic stony-coral loss has been recognition that gorgonian octocorals (Anthozoa: Octocorallia) have emerged among the dominant reef fauna. However, gorgonians are notoriously difficult to field-identify and consequently have been underrepresented in most monitoring efforts resulting in a lack of long-term data. The rich diversity of habitats, close proximity to the urban center of Miami, and connectivity to other areas of Florida have made Biscayne National Park an active location for reef research since its establishment in 1968. As such, a plethora of data (e.g., museum specimen and species abundance data) has been collected and stored in archives …

The Potential Of Radium-224 As A Tracer Of Timescales Of Gulf Of Mexico Crude Oil Exposure To The Marine Environment, Matthew T. Kurpiel

Electronic Theses and Dissertations

Petroleum pollution in the marine environment can be deleterious to coastal and marine ecosystems and can have sustained effects for years. While oil slicks on the surface of the ocean are tracked with relative ease using satellite-based technology, deep sea, neutrally-buoyant hydrocarbon plumes remain exceedingly difficult to track. We provide evidence for the utility of Ra-224 as a potential hydrocarbon tracer to determine the marine exposure time of crude oil. We employed time course incubations to constrain a time dependent Ra-224 release signature and tested a variety of timescales, temporal resolutions, oil sources, seawater, and experimental treatments to determine potential …

Past Climate And Sea-Level Reconstruction Using Cave Deposits From Mallorca, Spain, Oana-Alexandra Dumitru

USF Tampa Graduate Theses and Dissertations

The potential impacts of the increasing temperature on the water resources, as well as the hazards associated with the sea-level rise in the low-elevation coastal zones of the Mediterranean Sea, makes this region vulnerable to current climate change due to global warming. Hence, accurate projections of the future hydroclimate scenarios in this area are crucial. Long-term information on climate and sea-level variability cannot be obtained by direct observations or using short instrumental records. However, various geological archives may provide valuable data that can be then used to assess the models used for future predictions.

This thesis presents results on past …

The Adaptations Of The Sulfur-Oxidizing, Gammaproteobacterium "Candidatus Endoriftia Persephone", Endosymbiont Of The Giant Tubeworm Riftia Pachyptila, To Hydrothermal Vent Habitat Heterogeneity, Juliana M. Leonard

USF Tampa Graduate Theses and Dissertations

The siboglinid tubeworm Riftia pachyptila is a dominant member of the deep-sea megafauna where seawater and hydrothermal vent (HTV) effluent interface and mix. It is one of the fastest growing invertebrates on land or in the sea. It does not have a digestive tract (e.g. mouth, gut, or anus), and is completely dependent on its sulfur-oxidizing endosymbiont, the Gammaproteobacterium “Candidatus Endoriftia persephone” for its nutritional requirements. This association was the first and is the most well studied among chemolithoautotrophic symbioses. “Ca. E. persephone” is a chemolithoautotrophic bacterium that oxidizes sulfide as an electron donor for energy, reduces oxygen as a …