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2019

Marine Biology

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Articles 1 - 30 of 149

Full-Text Articles in Physical Sciences and Mathematics

The Vezo Communities And Fisheries Of The Coral Reef Ecosystem In The Bay Of Ranobe, Madagascar, Shane Abeare Dec 2019

The Vezo Communities And Fisheries Of The Coral Reef Ecosystem In The Bay Of Ranobe, Madagascar, Shane Abeare

University of New Orleans Theses and Dissertations

Madagascar, a country whose extraordinary levels of endemism and biodiversity are celebrated globally by scientists and laymen alike, yet historically has received surprisingly little research attention, is the setting of the present dissertation. Here, I contribute to the need for applied research by: 1) focusing on the most intensely fished section of the Toliara Barrier Reef, the Bay of Ranobe; 2) characterizing the marine environment, the human population, and the fisheries; and 3) collecting the longest known time-series of data on fisheries of Madagascar, thereby providing a useful baseline for future analyses. In Chapter 1, the bathymetry of the Bay …


Diel Temperature And Ph Variability Scale With Depth Across Diverse Coral Reef Habitats, Tyler Cyronak, Yuichiro Takeshita, Travis A. Courtney, Eric H. Decarlo, Bradley D. Eyre, David I. Kline, Todd R. Martz, Heather Page, Nichole Price, Jennifer Smith, Laura Stoltenberg, Martin Tresguerres, Andreas J. Andersson Dec 2019

Diel Temperature And Ph Variability Scale With Depth Across Diverse Coral Reef Habitats, Tyler Cyronak, Yuichiro Takeshita, Travis A. Courtney, Eric H. Decarlo, Bradley D. Eyre, David I. Kline, Todd R. Martz, Heather Page, Nichole Price, Jennifer Smith, Laura Stoltenberg, Martin Tresguerres, Andreas J. Andersson

Marine & Environmental Sciences Faculty Articles

Coral reefs are facing intensifying stressors, largely due to global increases in seawater temperature and decreases in pH. However, there is extensive environmental variability within coral reef ecosystems, which can impact how organisms respond to global trends. We deployed spatial arrays of autonomous sensors across distinct shallow coral reef habitats to determine patterns of spatiotemporal variability in seawater physicochemical parameters. Temperature and pH were positively correlated over the course of a day due to solar heating and light‐driven metabolism. The mean temporal and spatial ranges of temperature and pH were positively correlated across all sites, with different regimes of variability …


The Effects Of Sediment Acidification And Temperature On The Immune Capacity Of The Atlantic Jackknife (Razor) Clam (Ensis Leei M. Huber, 2015), Brian Preziosi Dec 2019

The Effects Of Sediment Acidification And Temperature On The Immune Capacity Of The Atlantic Jackknife (Razor) Clam (Ensis Leei M. Huber, 2015), Brian Preziosi

Electronic Theses and Dissertations

Sediment acidification has been shown to negatively impact clams of economic importance such as the soft-shell clam, Mya arenaria Linnaeus, 1758, and hard clam, Mercenaria mercenaria (Linnaeus, 1758). Effects of sediment acidification on razor clams, including the Atlantic jackknife clam Ensis leei M. Huber, 2015, are unknown. E. leei has been identified as a species with potential for aquaculture operations on the New England coast. E. leei may be resilient to acidification and thus persist in acidified sediments where other clams cannot. To this end, the impact of acidified surface sediment on the internal immune capacity of adult (mean shell …


Sixteen Years Of Social And Ecological Dynamics Reveal Challenges And Opportunities For Adaptive Management In Sustaining The Commons, Josh Eli Cinner, J. D. Lau, Andrew G. Bauman, David A. Feary, Fraser A. Januchowski-Hartley, C. A. Rojas, M. L. Barnes, B. J. Bergseth, E. Shum, R. Lahari, J. Ben, N. A. J. Graham Dec 2019

Sixteen Years Of Social And Ecological Dynamics Reveal Challenges And Opportunities For Adaptive Management In Sustaining The Commons, Josh Eli Cinner, J. D. Lau, Andrew G. Bauman, David A. Feary, Fraser A. Januchowski-Hartley, C. A. Rojas, M. L. Barnes, B. J. Bergseth, E. Shum, R. Lahari, J. Ben, N. A. J. Graham

Marine & Environmental Sciences Faculty Articles

Efforts to confront the challenges of environmental change and uncertainty include attempts to adaptively manage social–ecological systems. However, critical questions remain about whether adaptive management can lead to sustainable outcomes for both ecosystems and society. Here, we make a contribution to these efforts by presenting a 16-y analysis of ecological outcomes and perceived livelihood impacts from adaptive coral reef management in Papua New Guinea. The adaptive management system we studied was a customary rotational fisheries closure system (akin to fallow agriculture), which helped to increase the biomass of reef fish and make fish less wary (more catchable) relative to openly …


Pre-Juvenile Naked Goby (Gobiosoma Bosc) Age And Growth, Annamaria Deitz, Juliana Harding Dec 2019

Pre-Juvenile Naked Goby (Gobiosoma Bosc) Age And Growth, Annamaria Deitz, Juliana Harding

Honors Theses

Due to the abundance of larval naked gobies, Gobiosoma bosc, within the estuarine ichthyoplankton, it is important to understand their age and growth. Naked gobies are a largely distributed, both geographically and within an estuary, small, benthic fish species. There are 3 pairs of otoliths, calcium carbonate structures within the ear canal, that detect vibrations and record the age of the fish, both daily and annually. Using laboratory-reared gobies of a known age (Tremont et al. 2015), daily signatures on the sagittal otoliths were first validated to be daily, then a growth curve for the wild caught larvae was …


A Risk Analysis Of Microplastic Consumption In Filter Feeders, Sheri Rahman Dec 2019

A Risk Analysis Of Microplastic Consumption In Filter Feeders, Sheri Rahman

HCNSO Student Capstones

Microplastics (plastic particles < 5 mm) pose a serious threat to marine organisms, as researchers have documented such particles in the gut contents of numerous species. In particular, filter feeders are at risk of consuming microplastics because they may accidentally consume the particulates when feeding or they may prey on species that have already consumed them. The goals of this research were to evaluate the risks that different filter feeders face in regards to microplastic consumption through the analysis of the calculated Microplastic Consumption Rates for numerous species of filter feeders. Factors that could potentially affect this risk were also considered, including ocean basin, environment type, salinity, life stage, IUCN status, and filtration technique. Initial analysis showed that body size greatly impacted a species’ risk of microplastic consumption and further tests were completed to evaluate overall microplastic contamination for each species. Microplastic consumption and microplastic contamination values were evaluated and analyzed to determine which filter feeding species were most at risk of experiencing ecological effects from microplastic pollution. From a resource management perspective, this research highlights the filter feeding species most at risk, contributing to the development of more effective plastic waste management policies.


Arctic Thaw: Environmental Exploitation For Economic Profit, Stephen F. Moulton Dec 2019

Arctic Thaw: Environmental Exploitation For Economic Profit, Stephen F. Moulton

HCNSO Student Capstones

“Arctic Thaw: Environmental Exploitation for Economic Profit,” is a comprehensive, interdisciplinary assessment of Arctic climate change (CC) impacts. Arctic CC alters the regions’ temperature, annual ice cover, and sea levels. This alteration influences the global economy through enriched international trade and fossil hydrocarbon extraction developments. This capstone examines the Arctic’s response to CC through economic statistical analysis, tracking relative sea-level (RSL) trends, as well as performing hydrographic and modeling reviews. The Northern Rim Countries (NRCs) economic analysis assesses potential CC and GSLR impacts by applying statistical techniques to calculate its effect on each country’s gross domestic product (GDP). The tidal …


Spatial And Temporal Trends Of Southeastern Florida's Octocoral Comunity, Alexandra Hiley Dec 2019

Spatial And Temporal Trends Of Southeastern Florida's Octocoral Comunity, Alexandra Hiley

HCNSO Student Theses and Dissertations

In the Caribbean, local and global stressors have driven significant declines in scleractinian coral cover up to 80% in only three decades. Following these declines, phase shifts in benthic community composition have been reported. Shifts towards macroalgal dominance has been the most widely observed case, however, shifts towards octocoral and sponge dominance have also been reported. In Florida, USA, the Florida Reef Tract is an extensive barrier reef system that contains diverse assemblages of corals, sponges, fish, and other taxa. The Southeast Florida Reef Tract (SEFRT) within the Southeast Florida Coral Reef Conservation Area is the northern portion of this …


Multidisciplinary Observing In The World Ocean's Oxygen Minimum Zone Regions: From Climate To Fish - The Voice Initiative, V Garcon, J Karstensen, A Palacz, Et Al, Kevin C. Weng Dec 2019

Multidisciplinary Observing In The World Ocean's Oxygen Minimum Zone Regions: From Climate To Fish - The Voice Initiative, V Garcon, J Karstensen, A Palacz, Et Al, Kevin C. Weng

VIMS Articles

Multidisciplinary ocean observing activities provide critical ocean information to satisfy ever-changing socioeconomic needs and require coordinated implementation. The upper oxycline (transition between high and low oxygen waters) is fundamentally important for the ecosystem structure and can be a useful proxy for multiple observing objectives connected to eastern boundary systems (EBSs) that neighbor oxygen minimum zones (OMZs). The variability of the oxycline and its impact on the ecosystem (VOICE) initiative demonstrates how societal benefits drive the need for integration and optimization of biological, biogeochemical, and physical components of regional ocean observing related to EBS. In liaison with the Global Ocean Oxygen …


Sargassum Infauna Community Structure In The Florida Straits And Gulf Stream, Dayna S. Hunn Dec 2019

Sargassum Infauna Community Structure In The Florida Straits And Gulf Stream, Dayna S. Hunn

HCNSO Student Theses and Dissertations

Community structure of Sargassum-associated organisms was examined from 11 sampling locations in the Florida Straits and Gulf Stream from May—September 2018 using a combination of modified shrimp trawls and dip nets. A total of 5413 organisms were collected from Sargassumhabitat representing 14 species from 10 families. A core group of organisms (Platynereis dumerilii, Litiopa melanostoma, Portunus sayi, Portunus spinimanus, Leander tenuicornis, and Latreutes fucorum) were found throughout the entirety of the geographic range surveyed. This core community was not found to vary significantly with increasing distance to shore (P=0.217) and latitude …


Characterization Of Bacterial Communities In Biscayne Bay Through Genomic Analysis, Eric Fortman Dec 2019

Characterization Of Bacterial Communities In Biscayne Bay Through Genomic Analysis, Eric Fortman

HCNSO Student Theses and Dissertations

Biscayne Bay is a shallow oligotrophic estuary in Southeast Florida. Channelization of rivers, and dredging of canals has greatly altered the historical flow of fresh water into the bay. This, coupled with the rise of a sprawling urban & suburban development, has greatly increased the nutrient load in the bay. This study examined the bacterial community at 14 stations throughout Biscayne Bay —6 stations were located at the mouths of canals; 1 upstream-canal station; 6 stations in the center of the bay; and one ocean influenced station, located near the entrance to the bay. One liter, surface water samples were …


Histological Evidence Of Annual And Lunar Reproductive Rhythms Of Atlantic Sea Urchin, Arbacia Punctulata In The Gulf Of Mexico: Changes In Nutritive Phagocytes In Relation To Gametogenesis, Eleazar Hernandez Ii Dec 2019

Histological Evidence Of Annual And Lunar Reproductive Rhythms Of Atlantic Sea Urchin, Arbacia Punctulata In The Gulf Of Mexico: Changes In Nutritive Phagocytes In Relation To Gametogenesis, Eleazar Hernandez Ii

Theses and Dissertations

Environmental phenomena such as temperature, photoperiod, tidal cycle, and lunar rhythm act as external cues that stimulate the reproductive activity of marine organisms. In this study, I report the annual and lunar reproductive cycles, and changes in nutritive phagocytes (NPs) in relation to gonadal maturation of Atlantic sea urchin (Arbacia punctulata, a primeval species). Monthly and weekly changes in gonadal development/maturation were observed histologically. In male, the testicular lobules were densely packed with sperm from June to August. In female, on the other hand, mature eggs first appeared in some ovaries in May, numerically increased from June to …


Mitogenomic Phylogenetic Analyses Of Leptogorgia Virgulata And Leptogorgia Hebes (Anthozoa: Octocorallia) From The Gulf Of Mexico Provides Insight On Gorgoniidae Divergence Between Pacific And Atlantic Lineages, Samantha Silvestri, Diego F. Figueroa, David Hicks, Nicole J. Figueroa Nov 2019

Mitogenomic Phylogenetic Analyses Of Leptogorgia Virgulata And Leptogorgia Hebes (Anthozoa: Octocorallia) From The Gulf Of Mexico Provides Insight On Gorgoniidae Divergence Between Pacific And Atlantic Lineages, Samantha Silvestri, Diego F. Figueroa, David Hicks, Nicole J. Figueroa

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

The use of genetics in recent years has brought to light the need to reevaluate the classification of many gorgonian octocorals. This study focuses on two Leptogorgia species—Leptogorgia virgulata and Leptogorgia hebes—from the northwestern Gulf of Mexico (GOM). We target complete mitochondrial genomes and mtMutS sequences, and integrate this data with previous genetic research of gorgonian corals to resolve phylogenetic relationships and estimate divergence times. This study contributes the first complete mitochondrial genomes for L. ptogorgia virgulata and L. hebes. Our resulting phylogenies stress the need to redefine the taxonomy of the genus Leptogorgia in its entirety. The fossil-calibrated divergence …


Salty Sensors, Fresh Ideas: The Use Of Molecular And Imaging Sensors In Understanding Plankton Dynamics Across Marine And Freshwater Ecosystems, Trisha Lyn Spanbauer, Christian Briseno-Avena, Kathleen Johnson Pitz, Elizabeth A. Suter Nov 2019

Salty Sensors, Fresh Ideas: The Use Of Molecular And Imaging Sensors In Understanding Plankton Dynamics Across Marine And Freshwater Ecosystems, Trisha Lyn Spanbauer, Christian Briseno-Avena, Kathleen Johnson Pitz, Elizabeth A. Suter

Faculty Works: Biology, Chemistry, and Environmental Studies

Understanding plankton dynamics in marine ecosystems has been advanced using in situ molecular and imaging instrumentation. A range of research objectives have been addressed through high‐resolution autonomous sampling, from food web characterization to harmful algal bloom dynamics. When used together, molecular and imaging sensors can cover the full‐size range, genetic identity, and life stages of plankton. Here, we briefly review a selection of in situ instrumentation developed for the collection of molecular and imaging information on plankton communities in marine ecosystems. In addition, we interviewed a selection of instrumentation developers to determine if the transfer of sensor technology from marine …


The Complete Mitochondrial Genome Of Tanacetipathes Thamnea Warner, 1981 (Antipatharia: Myriopathidae), Diego F. Figueroa, David Hicks, Nicole J. Figueroa Nov 2019

The Complete Mitochondrial Genome Of Tanacetipathes Thamnea Warner, 1981 (Antipatharia: Myriopathidae), Diego F. Figueroa, David Hicks, Nicole J. Figueroa

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Specimens of the black coral Tanacetipathes thamnea were collected from the Northwestern Gulf of Mexico. The complete mitochondrial genome of one of these specimens was obtained from genomic DNA by next-generation sequencing technology on the Illumina HiSeq 2500. Only three species of black corals have a completely sequenced mitochondrial genome. These were used to reconstruct the phylogeny for the order Antipatharia. The mitochondrial genome of T. thamnea is 17,712 base pairs and contains 13 protein-coding genes, 2 ribosomal RNAs, and 2 transfer RNAs in the following order: 16s RNA, COX3, COX1 (with intron), ND4L, COX2, ND4, …


Non-Invasive Methods For Measuring And Monitoring Stress Physiology In Imperiled Amphibians, Edward J. Narayan, Zachery R. Forsburg, Drew R. Davis, Caitlin R. Gabor Nov 2019

Non-Invasive Methods For Measuring And Monitoring Stress Physiology In Imperiled Amphibians, Edward J. Narayan, Zachery R. Forsburg, Drew R. Davis, Caitlin R. Gabor

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Global climate change is negatively impacting global biodiversity and ectothermic vertebrates, with amphibians being the most imperiled vertebrate taxa. Increased mean global atmospheric temperatures, high rates of habitat degradation, and exposure to infectious diseases, such as chytridiomycosis, have contributed to population declines and extinctions of rare and endangered amphibian species. Field-based monitoring of physiological endocrine traits can help determine the sub-lethal effects of environmental stressors and provide early alerts when populations are chronically stressed. Recent advances in amphibian stress endocrinology include the development and use of non-invasive methods to quantify the glucocorticoid, or stress biomarker, corticosterone. Non-invasive methods, such as …


Water‐Borne And Plasma Corticosterone Are Not Correlated In Spotted Salamanders, Alice R. Millikin, Sarah K. Woodley, Drew R. Davis, Ignacio T. Moore, James T. Anderson Nov 2019

Water‐Borne And Plasma Corticosterone Are Not Correlated In Spotted Salamanders, Alice R. Millikin, Sarah K. Woodley, Drew R. Davis, Ignacio T. Moore, James T. Anderson

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Water‐borne hormone measurement is a noninvasive method suitable for amphibians of all sizes that are otherwise difficult to sample. For this method, containment‐water is assayed for hormones released by the animal. Originally developed in fish, the method has expanded to amphibians, but requires additional species‐specific validations. We wanted to determine physiological relevance of water‐borne corticosterone in spotted salamanders (Ambystoma maculatum) by comparing concentrations to those taken using established corticosterone sampling methods, such as plasma. Using a mixture of field and laboratory studies, we compared water‐borne corticosterone levels to other traditional methods of sampling corticosterone for spotted salamander larvae, metamorphs, and …


Investigations Of Aerobic Methane Oxidation In Two Marine Seep Environments: Part 1—Chemical Kinetics, Eric W. Chan, Allan M. Shiller, Dongjoo J. Joung, Eleanor C. Arrington, David L. Valentine, Molly C. Redmond, John A. Breier, Scott A. Socolofsky, John D. Kessler Nov 2019

Investigations Of Aerobic Methane Oxidation In Two Marine Seep Environments: Part 1—Chemical Kinetics, Eric W. Chan, Allan M. Shiller, Dongjoo J. Joung, Eleanor C. Arrington, David L. Valentine, Molly C. Redmond, John A. Breier, Scott A. Socolofsky, John D. Kessler

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Microbial aerobic oxidation is known to be a significant sink of marine methane (CH4), contributing to the relatively minor atmospheric release of this greenhouse gas over vast stretches of the ocean. However, the chemical kinetics of aerobic CH4 oxidation are not well established, making it difficult to predict and assess the extent that CH4 is oxidized in seawater following seafloor release. Here we investigate the kinetics of aerobic CH4 oxidation using mesocosm incubations of fresh seawater samples collected from seep fields in Hudson Canyon, U.S. Atlantic Margin and MC118, Gulf of Mexico to gain a fundamental chemical understanding of this …


Investigations Of Aerobic Methane Oxidation In Two Marine Seep Environments: Part 2—Isotopic Kinetics, Eric W. Chan, Allan M. Shiller, Dongjoo J. Joung, Eleanor C. Arrington, David L. Valentine, Molly C. Redmond, John A. Breier, Scott A. Socolofsky, John D. Kessler Nov 2019

Investigations Of Aerobic Methane Oxidation In Two Marine Seep Environments: Part 2—Isotopic Kinetics, Eric W. Chan, Allan M. Shiller, Dongjoo J. Joung, Eleanor C. Arrington, David L. Valentine, Molly C. Redmond, John A. Breier, Scott A. Socolofsky, John D. Kessler

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

During aerobic oxidation of methane (CH4) in seawater, a process which mitigates atmospheric emissions, the 12C‐isotopologue reacts with a slightly greater rate constant than the 13C‐isotopologue, leaving the residual CH4 isotopically fractionated. Prior studies have attempted to exploit this systematic isotopic fractionation from methane oxidation to quantify the extent that a CH4 pool has been oxidized in seawater. However, cultivation‐based studies have suggested that isotopic fractionation fundamentally changes as a microbial population blooms in response to an influx of reactive substrates. Using a systematic mesocosm incubation study with recently collected seawater, here we investigate the fundamental isotopic kinetics of aerobic …


Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller Nov 2019

Habitat Associations And Reproduction Of Fishes On The Northwestern Gulf Of Mexico Shelf Edge, Elizabeth Marie Keller

LSU Doctoral Dissertations

Several of the northwestern Gulf of Mexico (GOM) shelf-edge banks provide critical hard bottom habitat for coral and fish communities, supporting a wide diversity of ecologically and economically important species. These sites may be fish aggregation and spawning sites and provide important habitat for fish growth and reproduction. Already designated as habitat areas of particular concern, many of these banks are also under consideration for inclusion in the expansion of the Flower Garden Banks National Marine Sanctuary. This project aimed to gain a more comprehensive understanding of the communities and fish species on shelf-edge banks by way of gonad histology, …


Inferred Function And Dynamics Of Microbial Communities From The Northern Gulf Of Mexico, Deepesh Tourani Nov 2019

Inferred Function And Dynamics Of Microbial Communities From The Northern Gulf Of Mexico, Deepesh Tourani

HCNSO Student Theses and Dissertations

Microbial communities, or microbiomes, are the major drivers of global biogeochemical cycles, acting as primary producers and decomposers across the water column in the oceans. Thus, they reflect changes in physicochemical properties and nutrient composition of the ocean. However, this correlation between ecological changes and the function of marine microbiomes is poorly understood. Large-scale oceanic events such as the bottom-water oxygen-depleted zone (i.e., “dead zone”) and the Deepwater Horizon oil spill in the Gulf of Mexico (GoM) render the ecosystem fragile. These events decrease survival rates of pelagic and coastal macrofauna and affect the biodiversity of the region. As part …


Trust And Influence In The Gulf Of Mexico’S Fishery Public Management Network, Anthony Lima, Dongkyu Kim, Andrew M. Song, Gordon M. Hickey, Owen Temby Nov 2019

Trust And Influence In The Gulf Of Mexico’S Fishery Public Management Network, Anthony Lima, Dongkyu Kim, Andrew M. Song, Gordon M. Hickey, Owen Temby

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Sustainable fishery management is a complex multi-sectoral challenge requiring substantial interagency coordination, collaboration, and knowledge sharing. While scholars of public management network theory and natural resource management have identified trust as one of the key ideational network properties that facilitates such interaction, relatively few studies have operationalized and measured the multiple dimensions of trust and their influence on collaboration. This article presents the results of an exploratory study examining the Gulf of Mexico fishery management network comprised of more than 30 stakeholder organizations. Using an empirically validated survey instrument, the distribution of four types of trust, three gradations of influence, …


Increasing Impacts Of Extreme Droughts On Vegetation Productivity Under Climate Change, Chonggang Xu, Nate G. Mcdowell, Rosie A. Fisher, Liang Wei, Sanna Sevanto, Bradley O. Christoffersen, Engsheng Weng, Richard S. Middleton Nov 2019

Increasing Impacts Of Extreme Droughts On Vegetation Productivity Under Climate Change, Chonggang Xu, Nate G. Mcdowell, Rosie A. Fisher, Liang Wei, Sanna Sevanto, Bradley O. Christoffersen, Engsheng Weng, Richard S. Middleton

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Terrestrial gross primary production (GPP) is the basis of vegetation growth and food production globally1 and plays a critical role in regulating atmospheric CO2 through its impact on ecosystem carbon balance. Even though higher CO2 concentrations in future decades can increase GPP2, low soil water availability, heat stress and disturbances associated with droughts could reduce the benefits of such CO2 fertilization. Here we analysed outputs of 13 Earth system models to show an increasingly stronger impact on GPP by extreme droughts than by mild and moderate droughts over the twenty-first century. Due to a dramatic increase in …


Seaflow Data V1, High-Resolution Abundance, Size And Biomass Of Small Phytoplankton In The North Pacific, François Ribalet, Chris Berthiaume, Annette Hynes, Jarred Swalwell, Michael Carlson, Sophie Clayton, Gwenn Hennon, Camille Poirier, Eric Shimabukuro, Angelicque White, E. Virginia Armhurst Nov 2019

Seaflow Data V1, High-Resolution Abundance, Size And Biomass Of Small Phytoplankton In The North Pacific, François Ribalet, Chris Berthiaume, Annette Hynes, Jarred Swalwell, Michael Carlson, Sophie Clayton, Gwenn Hennon, Camille Poirier, Eric Shimabukuro, Angelicque White, E. Virginia Armhurst

OES Faculty Publications

SeaFlow is an underway flow cytometer that provides continuous shipboard observations of the abundance and optical properties of small phytoplankton (μm in equivalent spherical diameter, ESD). Here we present data sets consisting of SeaFlow-based cell abundance, forward light scatter, and pigment fluorescence of individual cells, as well as derived estimates of ESD and cellular carbon content of picophytoplankton, which includes the cyanobacteria Prochlorococcus, Synechococcus and small-sized Crocosphaera (μm ESD), and picophytoplankton and nanophytoplankton (2–5 μm ESD). Data were collected in surface waters (≈5 m depth) from 27 oceanographic cruises carried out in the Northeast Pacific Ocean between 2010 and 2018. …


Spatial And Temporal Variation Of Offshore Wind Power And Its Values Along The Central California Coast, Yi-Hui Wang, Ryan K. Walter, Crow White, Matthew D. Kehrli, Stephen F. Hamilton, Patrick H. Soper, Benjamin I. Ruttenberg Oct 2019

Spatial And Temporal Variation Of Offshore Wind Power And Its Values Along The Central California Coast, Yi-Hui Wang, Ryan K. Walter, Crow White, Matthew D. Kehrli, Stephen F. Hamilton, Patrick H. Soper, Benjamin I. Ruttenberg

Physics

The analysis of the spatiotemporal variability of wind power remains limited during the planning stage of an offshore wind farm. This study provides a framework to investigate how offshore wind power varies along the Central California Coast over diurnal and seasonal time scales, which is critical for reliability and functionality of the grid system. We find that offshore wind power in this region peaks during evening hours across all seasons and maximizes in spring and summer. The timing of peak offshore wind power production better aligns with that of peak demand across California than solar and land-based wind power production, …


Spatial And Seasonal Differences In The Top Predators Of Easter Island: Essential Data For Implementing The New Rapa Nui Multiple‐Uses Marine Protected Area, Naiti A. Morales, Erin E. Easton, Alan M. Friedlander, Euan S. Harvey, Rodrigo Garcia, Carlos F. Gaymer Oct 2019

Spatial And Seasonal Differences In The Top Predators Of Easter Island: Essential Data For Implementing The New Rapa Nui Multiple‐Uses Marine Protected Area, Naiti A. Morales, Erin E. Easton, Alan M. Friedlander, Euan S. Harvey, Rodrigo Garcia, Carlos F. Gaymer

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

  1. Reef fishes are an important component of marine biodiversity, and changes in the composition of the assemblage structure may indicate ecological, climatic, or anthropogenic disturbances. To examine spatial differences in the reef fish assemblage structure around Easter Island, eight sites were sampled during autumn and summer 2016–2017 with baited remote underwater video systems.
  2. To determine seasonal changes, quarterly (seasonal) sampling was conducted at five of those eight sites. Fifteen pelagic species of fishes were recorded during this study, some of which have not previously been recorded in scuba surveys, including the Galapagos shark (Carcharhinus galapagensis, Snodgrass & Heller, …


The Importance Of Antarctic Krill In Biogeochemical Cycles, El Cavan, A Belcher, Sl Hill, S Kawaguchi, S Mccormack, B Meyer, S Nicol, K Schmidt, Deborah K. Steinberg, Ga Tarling, Pw Boyd Oct 2019

The Importance Of Antarctic Krill In Biogeochemical Cycles, El Cavan, A Belcher, Sl Hill, S Kawaguchi, S Mccormack, B Meyer, S Nicol, K Schmidt, Deborah K. Steinberg, Ga Tarling, Pw Boyd

VIMS Articles

Antarctic krill (Euphausia superba) are swarming, oceanic crustaceans, up to two inches long, and best known as prey for whales and penguins – but they have another important role. With their large size, high biomass and daily vertical migrations they transport and transform essential nutrients, stimulate primary productivity and influence the carbon sink. Antarctic krill are also fished by the Southern Ocean’s largest fishery. Yet how krill fishing impacts nutrient fertilisation and the carbon sink in the Southern Ocean is poorly understood. Our synthesis shows fishery management should consider the influential biogeochemical role of both adult and larval …


Broadband Sound Propagation In A Seagrass Meadow Throughout A Diurnal Cycle, Kevin M. Lee, Megan S. Ballard, Gabriel R. Venegas, Jason D. Sagers, Andrew R. Mcneese, Jay R. Johnson, Preston S. Wilson, Abdullah Rahman Oct 2019

Broadband Sound Propagation In A Seagrass Meadow Throughout A Diurnal Cycle, Kevin M. Lee, Megan S. Ballard, Gabriel R. Venegas, Jason D. Sagers, Andrew R. Mcneese, Jay R. Johnson, Preston S. Wilson, Abdullah Rahman

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

Acoustic propagation measurements were conducted in a Thalassia testudinum meadow in the Lower Laguna Madre, a shallow bay on the Texas Gulf of Mexico coast. A piezoelectric source transmitted frequency-modulated chirps (0.1 to 100 kHz) over a 24-h period during which oceanographic probes measured environmental parameters including dissolved oxygen and solar irradiance. Compared to a nearby less vegetated area, the received level was lower by as much as 30 dB during the early morning hours. At the peak of photosynthesis-driven bubble production in the late afternoon, an additional decrease in level of 11 dB was observed.


Fear Effects Associated With Predator Presence And Habitat Structure Interact To Alter Herbivory On Coral Reefs, Andrew G. Bauman, Jovena C. L. Seah, Fraser A. Januchowski-Hartley, Andrew S. Hoey, Jenny Fong, Peter A. Todd Oct 2019

Fear Effects Associated With Predator Presence And Habitat Structure Interact To Alter Herbivory On Coral Reefs, Andrew G. Bauman, Jovena C. L. Seah, Fraser A. Januchowski-Hartley, Andrew S. Hoey, Jenny Fong, Peter A. Todd

Marine & Environmental Sciences Faculty Articles

Non-consumptive fear effects are an important determinant of foraging decisions by consumers across a range of ecosystems. However, how fear effects associated with the presence of predators interact with those associated with habitat structure remain unclear. Here, we used predator fish models (Plectropomus leopardus) and experimental patches of the macroalga Sargassum ilicifolium of varying densities to investigate how predator- and habitat-associated fear effects influence herbivory on coral reefs. We found the removal of macroalgal biomass (i.e. herbivory) was shaped by the interaction between predator- and habitat-associated fear effects. Rates of macroalgal removal declined with increasing macroalgal density, likely …


Hypoxia In Mangroves: Occurrence And Impact On Valuable Tropical Fish Habitat, Alexia Dubuc, Ronald Baker, Cyril Marchand, Nathan Waltham, Marcus Sheaves Oct 2019

Hypoxia In Mangroves: Occurrence And Impact On Valuable Tropical Fish Habitat, Alexia Dubuc, Ronald Baker, Cyril Marchand, Nathan Waltham, Marcus Sheaves

School of Marine and Environmental Sciences Faculty and Staff Publications and Presentations

Intertidal mangrove forests are harsh environments that can naturally experience hypoxia in association with low tide. However, we know relatively little about dissolved oxygen (DO) fluctuations and DO-induced responses by fish, although DO is a fundamental water quality parameter. This study examines DO as a potential factor regulating the utilization of intertidal mangrove forests by fish and consequently their widely recognized feeding, refuge and nursery values. We deployed underwater video cameras, coupled with DO and depth loggers, in a mangrove forest to record changes in fish assemblages in response to tidal variations in DO and other associated environmental parameters. Our …