Physical Sciences and Mathematics Commons^™

Long-Term Variation Of Summer Phytoplankton Communities In An Urban Lake In Relation To Lake Management And Climate Conditions, Yuan Xiao Grund

Dissertations and Theses

Eutrophication is one of the primary factors causing harmful cyanobacteria blooms in freshwater lakes; climate change such as warmer temperature can potentially further increase both frequency and intensity of blooms. This study investigated the long-term changes in water quality and summer phytoplankton assemblages in Oswego Lake, OR, in relation to lake management practices (e.g., hypolimnetic aeration and alum treatments), as well as climatic and regional meteorological conditions. Both water quality and phytoplankton assemblages were sampled biweekly during summer seasons between 2001 and 2013. The concentrations of total phosphorus (TP), soluble reactive phosphorus (SRP) and total nitrogen (TN) decreased 66%, 93% …

From Probabilistic Socio-Economic Vulnerability To An Integrated Framework For Flash Flood Prediction, Sepideh Khajehei

Dissertations and Theses

Flash flood is among the most hazardous natural disasters, and it can cause severe damages to the environment and human life. Flash floods are mainly caused by intense rainfall and due to their rapid onset (within six hours of rainfall), very limited opportunity can be left for effective response. Understanding the socio-economic characteristics involving natural hazards potential, vulnerability, and resilience is necessary to address the damages to economy and casualties from extreme natural hazards. The vulnerability to flash floods is dependent on both biophysical and socio-economic factors. This study provides a comprehensive assessment of socio-economic vulnerability to flash flood alongside …

Lone Wolves And Copycats: Assessing Policy And Infrastructure For Flood Hazard And Floodplain Management, Samantha L. Hamlin

Dissertations and Theses

To mitigate flood hazard, which affects millions of people every year, increasing numbers of communities are developing green infrastructure policies to not only mitigate the hazard, but to meet other community policy objectives, as green infrastructure is often cited for the multiple benefits it confers. To support the implementation of policies that help communities meet their policy objectives, however, it is imperative to understand how policy is innovated and adopted. To do so, I applied the internal determinants and regional diffusion models, what I refer to as the lone wolf and copycat models. In policy, a lone wolf innovates a …

Characterizing Temperature Variability States Across Southern South America And Associated Synoptic-Scale Meteorological Patterns, Judah Adam Detzer

Dissertations and Theses

The aim of this thesis is to understand spatiotemporal temperature variability in southern South America by identifying overarching temperature variability states and their associated synoptic-scale meteorological patterns. Further, the temporal frequency of occurrence of those temperature variability states is investigated as is the role of recurrent low-frequency modes of climate variability (El Niño Southern Oscillation and the Southern Annular Mode) on temperature variability. K-means cluster analysis is used to group all months during the period 1980-2015 into four primary categories for summer and winter separately. Monthly maps of temperature anomalies are provided as input to the k-means algorithm and the …

Shear-Force Acoustic Near-Field Microscopy And Its Implementation In The Study Of Confined Mesoscopic Fluids, Theodore Alex Brockman

Dissertations and Theses

The recently developed Shear-Force Acoustic Near-Field Microscope (SANM) is used to investigate the viscoelastic properties of a mesoscopic fluid layer confined between two trapping boundaries, one being a stationary substrate and the other the apex of a laterally oscillating tapered probe. Hardware improvements and evaluation of the SANM-probe robustness will be a major focus of this thesis. The investigation first discusses characterization and recent developments made to the microscope, including: modifications to the sensor head, conditioning of the Nano positioners electrical drive signal, and the assessment of the probe against eventual plastic deformation or compliance against interactions with samples (the …

Early Detection Of Corrosion Via Hydrogel-Based Spectroelectrochemical Sensors, Capri Ann Price

Dissertations and Theses

The backbone of the industrialized world is comprised of refined, zerovalent metal, a material which thermodynamically favors an oxidative return to more chemically stable states. There are many methods used to slow or delay this process, such as protective coatings, sacrificial anodes, and alloys, but no method can entirely prevent corrosion. This body of work instead proposes detecting the earliest chemical markers of corrosion: that is, metal ions as they solubilize from a metal surface. Such information would allow maintenance personnel to make informed decisions about the necessity or lack thereof of preventive maintenance, and intervene before advanced damage has …

Annotation-Enabled Interpretation And Analysis Of Time-Series Data, Niveditha Venugopal

Dissertations and Theses

As we continue to produce large amounts of time-series data, the need for data analysis is growing rapidly to help gain insights from this data. These insights form the foundation of data-driven decisions in various aspects of life. Data annotations are information about the data such as comments, errors and provenance, which provide context to the underlying data and aid in meaningful data analysis in domains such as scientific research, genomics and ECG analysis. Storing such annotations in the database along with the data makes them available to help with analysis of the data. In this thesis, I propose a …

Ensemble Data Assimilation For Flood Forecasting In Operational Settings: From Noah-Mp To Wrf-Hydro And The National Water Model, Mahkameh Zarekarizi

Dissertations and Theses

The National Water Center (NWC) started using the National Water Model (NWM) in 2016. The NWM delivers state-of-the-science hydrologic forecasts in the nation. The NWM aims at operationally forecasting streamflow in more than 2,000,000 river reaches while currently river forecasts are issued for 4,000. The NWM is a specific configuration of the community WRF-Hydro Land Surface Model (LSM) which has recently been introduced to the hydrologic community. The WRF-Hydro model, itself, uses another newly-developed LSM called Noah-MP as the core hydrologic model. In WRF-Hydro, Noah-MP results (such as soil moisture and runoff) are passed to routing modules. Riverine water level …

Measuring And Modeling Evolution Of Cryoconite Holes In The Mcmurdo Dry Valleys, Antarctica, Felix Jacob Zamora

Dissertations and Theses

Cryoconite holes are vertical columns of meltwater within the shallow subsurface of glaciers. In the McMurdo Dry Valleys (MDV) of Antarctica cryoconite holes are a source of meltwater and harbor microbial communities in an otherwise arid environment with low biologic activity. The holes form as sediments on the ice surface, which are darker than the surrounding ice, are preferentially heated by solar radiation. The warm sediments melt the underlying ice and migrate downwards. An ice lid forms, isolating them from the below-freezing atmosphere enabling them to remain thawed. In this study, field observations, laboratory experiments, and numerical modeling are used …

Removal Efficiencies, Uptake Mechanisms And Competitive Effects Of Copper And Zinc In Various Stormwater Filter Media, Emily Heleva-Ponaski

Dissertations and Theses

Polluted stormwater, if not treated, can compromise water quality throughout our hydrologic cycle, adversely affecting aquatic ecosystems. Common stormwater pollutants, copper and zinc, have been identified as primary toxicants in multiple freshwater and marine environments. For small-scale generators, stormwater management can be cumbersome and implementation of common BMPs impractical thus catch basins are popular though not the most environmentally conscious and sustainable option. This study aims to characterize the potential of a mobile media filter operation for the treatment and on-site recycling of catch basin stormwater. The removal capacities of various commercially available filter media (e.g. a common perlite; Earthlite™, …

Ecology And Population Dynamics Of Salmonids In The Columbia River: Response Of Fishes To Anthropogenic Change In A Large Riverscape, Timothy Sean Elder

Dissertations and Theses

Freshwater ecosystems and the species that reside therein are disproportionately imperiled compared to terrestrial systems. Over the past 150 years, the Columbia River basin in the western United States has gone from one of the most productive and abundant salmon watersheds in the world, to having just a small fraction of its former salmon abundance. The cause of declines in salmon productivity and abundance are related to overlapping and confounding stressors including changes in large-scale climatic patterns and anthropogenic alterations within and adjacent to the Columbia River. Four main anthropogenic stressors have been identified as the leading causes of salmonid …

Using Strong Laser Fields To Produce Antihydrogen Ions, Christopher Michael Keating

Dissertations and Theses

We provide estimates of both cross section and rate for the stimulated attachment of a second positron into the (1s^{2 1}S^e) state of the H+ ion using Ohmura and Ohmura's (1960 Phys. Rev. 118 154) effective range theory, Reiss's strong field approximation (1980 Phys. Rev. A 22, 1786), and the principle of detailed balancing. Our motivation for producing H+ ion include its potential to be used as an intermediate state in bringing antihydrogen to ultra-cold (sub-mK) temperatures required for a variety of studies, which include both spectroscopy and the probing of the gravitational interaction of …

Assessing Spatiotemporal Stream Temperature Trends And Drivers Through Integrated Longitudinal Thermal Profiling And Stationary Data Logger Methodology On The Upper Chehalis River, Wa, Whitney Vonada

Dissertations and Theses

This study encompasses 25 kilometers of the Chehalis River in Washington, USA that currently has sections under a Total Maximum Daily Load (TMDL) plan for stream temperature impairments that exceed 18°C, a regulatory standard set at the time of the listing to protect salmonid spawning, rearing, and migration. Using information integrated from stationary data loggers (n=22) that collected stream temperature information from August 4-September 10, 2017, and longitudinal thermal profiling performed on July 29-30, August 4-5, and September 9-10, 2017, this study aimed to quantify the spatial distribution of stream temperature, evaluate relative consistencies of the riverine thermal regime over …

Removing Dams, Constructing Science: Watershed Restoration Through A Socio-Eco-Technical Systems Lens, Zbigniew Jakub Grabowski

Dissertations and Theses

Ecological conservation and restoration in the anthropocene must struggle with overlapping drivers of biodiversity and cultural loss; ruptures of the ecological environment mirror ruptures of human relationships with nature. And yet technology cannot remove humans from nature; technological and infrastructural reconfigurations of nature create new vulnerabilities and risks for humans and ecosystems alike. How can conservation and restoration science productively grapple with complex infrastructure systems and decision-making processes as biophysical and social drivers of ecosystem change?

Using dam removals in the USA and in the Mid Columbia River region of the Pacific Northwest, this dissertation develops a conceptual framework for …

Thiophene-Based Molecular Sensors Towards The Selective Detection Of Mercury(Ii) And Other Metals, Austin Kazuo Shigemoto

Dissertations and Theses

This work describes several thiophene-based molecular sensors and various modifications aimed to improve and understand the photophysical and supramolecular properties, such as the association constant (K_a) and selectivity, towards the development of a selective mercury(II) sensor. From the first generation of sensors containing pyridine and thiophene groups, it was determined that thiophene can offer good selectivity for mercury(II) against other transition metal ions, and provide a ratiometric absorption and fluorescent response. The projects following this focused on improving the K_a of the first generation of sensors through several different strategies. Substitution of thiophene for dibenzothiophene was …

Using Wetlands To Prevent The Surface Accumulation Of Aphanizomenon Flos-Aquae From Upper Klamath Lake, Arick Christopher Rouhe

Dissertations and Theses

The ability to regulate buoyancy (sinking and floating) using cellular gas vesicles is a unique characteristic that allows many common bloom-forming cyanobacteria to accumulate at water surfaces and dominate systems. Typical control and management strategies include nutrient manipulation and phosphorus reduction, which are effective but do not reduce the advantage of buoyancy control. Since buoyancy control is based upon a mechanism that is driven by photosynthesis along with environmental conditions that trigger vesicle formation and ion exchange, buoyancy regulation can be influenced by manipulating extracellular conditions. In this study I manipulated extracellular conditions using wetland water and additions of potassium, …

Rock Glaciers Of The Contiguous United States: Spatial Distribution, Cryospheric Context, And Riparian Vegetation, Gunnar Forrest Johnson

Dissertations and Theses

Continental-scale inventories of glaciers are available, but no analogous rock glacier inventories exist. We present the Portland State University Rock Glacier Inventory (n = 10,343) for the contiguous United States, then compare it to an existing inventory of contiguous United States glaciers (n = 853), identifying geographic and climatic factors affecting the spatial distributions observed. At least one rock glacier is identified in each of the 11 westernmost states, but nearly 90% are found in just five; Colorado (n = 3889), Idaho (n = 1723), Montana (n = 1780), Utah (n = 834), and Wyoming (n = 849). Glaciers are …

Dynamics Of Magma Recharge And Mixing At Mount Hood Volcano, Oregon -- Insights From Enclave-Bearing Lavas, Molly Kathryn Ellowitz

Dissertations and Theses

Magma recharge events and subsequent mixing processes are understood to precede volcanic eruptions. Textural evidence of intrusion of hot, mafic magma into a cooler, rheologically locked silicic magma is commonplace. Solidified "blobs" of injected magma, called enclaves, are evidence of magma mixing, but the petrological and mechanical conditions during their formation are debated. Mount Hood, Oregon consistently erupts andesite bearing compositionally similar enclaves. These enclaves are evidence of mingling and mixing of two magmas. However, due to the compositional similarity between enclave and host lava (e.g. ~1-5 wt.% difference in SiO₂), it is unclear whether the preserved enclaves …

Effectiveness Of Pollinator Enhancements In Portland Community Orchards, Jess Alan Tyler

Dissertations and Theses

In urban areas, residential and community gardens are potential floral resources for pollinators. Pollinator "friendly" gardens are a popular way to support this ecosystem service, but the pollinator plant list recommendations lack empirical evidence to show which plants are most attractive to potential pollinators. This project used a community science survey based on a morpho-species protocol to monitor five community orchards in Portland, Oregon during six months of the growing season in 2017. Overall, orchards with higher floral species richness supported higher richness and abundance of pollinators, but the pollinator communities were not significantly different among the orchard sites. Orchard …

Investigation Of The Acoustic Response Of A Confined Mesoscopic Water Film Utilizing A Combined Atomic Force Microscope And Shear Force Microscope Technique, Monte Allen Kozell

Dissertations and Theses

An atomic force microscopy beam-like cantilever is combined with an electrical tuning fork to form a shear force probe that is capable of generating an acoustic response from the mesoscopic water layer under ambient conditions while simultaneously monitoring force applied in the normal direction and the electrical response of the tuning fork shear force probe. Two shear force probes were designed and fabricated. A gallium ion beam was used to deposit carbon as a probe material. The carbon probe material was characterized using energy dispersive x-ray spectroscopy and scanning transmission electron microscopy. The probes were experimentally validated by demonstrating the …

Epa-Rimm-V: Efficient Rootkit Detection For Virtualized Environments, Tejaswini Ajay Vibhute

Dissertations and Theses

The use of virtualized environments continues to grow for efficient utilization of the available compute resources. Hypervisors virtualize the underlying hardware resources and allow multiple Operating Systems to run simultaneously on the same infrastructure. Since the hypervisor is installed at a higher privilege level than the Operating Systems in the software stack it is vulnerable to rootkits that can modify the environment to gain control, crash the system and even steal sensitive information. Thus, runtime integrity measurement of the hypervisor is essential. The currently proposed solutions achieve the goal by relying either partially or entirely on the features of the …

Volcanic Glass As A Paleoenvironmental Proxy: Comparing Preparation Methods On Ashes From The Lee Of The Cascade Range In Oregon, Usa, Tessa Boe Carlson

Dissertations and Theses

Deuterium ratios (δD) of hydrated volcanic glass have been used to reconstruct paleoenvironments, although the reliability and proper sample preparation protocol have been debated. In this study, hydrated volcanic ash samples from the lee of the Cascades were prepared using two separate methods. Method 1 involves sonicating and rinsing samples with hydrochloric acid (HCl) followed by hand-selection of glass shards (125-212µm). Method 2 requires hydrochloric acid (HCl) and hydrofluoric acid (HF) abrasion as well as heavy liquid separation of shards (70-150µm). Method 2 produced more consistent results with decreased intra-replicate variability in both water content (-0.92 wt. %) and deuterium …

Mooring Impacts On Zostera Marina Meadows And Associated Epifauna In Nantucket Harbor, Massachusetts, Usa, Andrew Wright Mccandless

Dissertations and Theses

Seagrass ecosystems are some of the most productive in the world and provide a variety of ecosystem services but are facing global decline chiefly due to anthropogenic disturbance. Mechanical disturbances to seagrass meadows from anchoring, propeller scars, and mooring scars result in losses or damage to both shoots and the underlying rhizome. I conducted a literature synthesis on the extent of, recovery from, and ecological impacts of these mechanical disturbances to seagrass meadows. The literature suggests that anchoring damage tends to be worst in deeper water where larger vessels anchor and can cause large (>100m²) loss per …

Electro-Drop Bouncing In Low-Gravity, Erin Stivers Schmidt

Dissertations and Theses

We investigate the dynamics of spontaneous jumps of water drops from electrically charged superhydrophobic dielectric substrates during a sudden step reduction in gravity level. In the brief free-fall environment of a drop tower, with a non-homogeneous external electric field arising due to dielectric surface charges (with surface potentials 0.4-1.8 kV), body forces acting on the jumped drops are primarily supplied by polarization stress and Coulombic attraction instead of gravity. This electric body force leads to a drop bouncing behavior similar to well-known phenomena in 1-g₀, though occurring for much larger drops (~0.5 mL). We show a simple …

Assessment Of Observational Uncertainty In Extreme Precipitation Over The Continental United States, Emily Anne Slinskey

Dissertations and Theses

An extreme precipitation categorization scheme, developed to temporally and spatially visualize and track the multi-scale variability of extreme precipitation climatology, is introduced over the continental United States and used as the basis for an observational dataset intercomparison. The categorization scheme groups three-day precipitation totals exceeding 100 mm into five precipitation categories, or "P-Cats". To assess observational uncertainty across a range of precipitation measurement approaches, we compare in situ station data from the Global Historical Climatology Network-Daily (GHCN-D), satellite derived data from the Tropical Rainfall Measuring Mission (TRMM), gridded station data from the Parameter-elevation Regression on Independent Slopes Model (PRISM), global …

Development Of A Direct Aqueous Synthetic Route For The Production Of Elemental Bismuth Nanoparticles, Colin Jon Hiatt

Dissertations and Theses

Bismuth nanoparticles (Bi NPs) for use as an X-ray contrast material have gained significant traction in recent years due to the high atomic number and generally accepted biological tolerance of bismuth. However, to be considered a viable candidate for use in this application, water solubility is a necessity, which poses a challenge, since bismuth tends to readily oxidize. For this reason, research into the direct aqueous synthesis of Bi NPs is still in its infancy and can be very difficult, as described in Chapter 1. The remaining chapters of the thesis describe the direct aqueous synthesis of Bi NPs starting …

Bounding Box Improvement With Reinforcement Learning, Andrew Lewis Cleland

Dissertations and Theses

In this thesis, I explore a reinforcement learning technique for improving bounding box localizations of objects in images. The model takes as input a bounding box already known to overlap an object and aims to improve the fit of the box through a series of transformations that shift the location of the box by translation, or change its size or aspect ratio. Over the course of these actions, the model adapts to new information extracted from the image. This active localization approach contrasts with existing bounding-box regression methods, which extract information from the image only once. I implement, train, and …

An Exploration Of Linear Classifiers For Unsupervised Spiking Neural Networks With Event-Driven Data, Wesley Chavez

Dissertations and Theses

Object recognition in video has seen giant strides in accuracy improvements in the last few years, a testament to the computational capacity of deep convolutional neural networks. However, this computational capacity of software-based neural networks coincides with high power consumption compared to that of some spiking neural networks (SNNs), up to 300,000 times more energy per synaptic event in IBM's TrueNorth chip, for example. SNNs are also well-suited to exploit the precise timing of event-driven image sensors, which transmit asynchronous "events" only when the luminance of a pixel changes above or below a threshold value. The combination of event-based imagers …

Dark Current Rts-Noise In Silicon Image Sensors, Benjamin William Hendrickson

Dissertations and Theses

Random Telegraph Signal (RTS) noise is a random noise source defined by discrete and metastable changes in the magnitude of a signal. Though observed in a variety of physical processes, RTS is of particular interest to image sensor fabrication where progress in the suppression of other noise sources has elevated its noise contribution to the point of approaching the limiting noise source in scientific applications.

There have been two basic physical sources of RTS noise reported in image sensors. The first involves a charge trap in the oxide layer of the source follower in a CMOS image sensor. The capture …

Composition And Dispersal Dynamics Of Vegetation Communities In Urban Riparian Forests, Christa Von Behren

Dissertations and Theses

In urban riparian areas, vegetation composition may be affected by urban land use changes at both the stream reach and the watershed scale. Moreover, the mechanisms by which seeds disperse may be affected both by reduction in seed sources due to vegetation removal and by the urban stream syndrome that produces flashier hydrographs and incised channels. I hypothesized that vegetation communities with high cover of native and hydrophilic species would be found in watersheds with high forest cover, while more limited cover of these species would be found in highly developed watersheds. Additionally, to examine the dispersal mechanisms contributing to …