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Full-Text Articles in Physical Sciences and Mathematics

Development Of A Two-Photon Imaging System, Jesseca Hollenbaugh Jun 2024

Development Of A Two-Photon Imaging System, Jesseca Hollenbaugh

University Honors Theses

The objective of this project was to convert a Sarastro 2000 confocal laser scanning microscope (CLSM) into a system capable of far-field two-photon excitation (TPE) imaging for the use of the PSU Biology department. TPE microscopy operates on the ability of fluorophores to accept two photons each with half the energy of a desired transition in a single quantum event via a virtual energy state and then emit a higher energy photon upon relaxation. This is preferable to single-photon excitation (SPE) imaging due to lower photon imaging, causing less damage to delicate biological samples, as well as the inherent localization …


The Use Of Fluorescence Lifetime Imaging (Flim) For In Situ Microbial Detection In Complex Mineral Substrates, Yekaterina G. Chmykh, Jay Nadeau Jan 2024

The Use Of Fluorescence Lifetime Imaging (Flim) For In Situ Microbial Detection In Complex Mineral Substrates, Yekaterina G. Chmykh, Jay Nadeau

Physics Faculty Publications and Presentations

The utility of fluorescence lifetime imaging microscopy (FLIM) for identifying bacteria in complex mineral matrices was investigated. Baseline signals from unlabelled Bacillus subtilis and Euglena gracilis, and Bacillus subtilis labelled with SYTO 9 were obtained using two-photon excitation at 730, 750 and 800 nm, identifying characteristic lifetimes of photosynthetic pigments, unpigmented cellular autofluorescence, and SYTO 9. Labelled and unlabelled B. subtilis were seeded onto marble and gypsum samples containing endolithic photosynthetic cyanobacteria and the ability to distinguish cells from mineral autofluorescence and nonspecific dye staining was examined in parallel with ordinary multichannel confocal imaging. It was found that FLIM …


Understanding The Emission From Semiconductor Nanoparticles, Beth Ann Manhat Jan 2012

Understanding The Emission From Semiconductor Nanoparticles, Beth Ann Manhat

Dissertations and Theses

This dissertation describes the synthesis and characterization of fluorescent semiconductor nanoparticles (NPs) in order to optimize their biomedical utility for imaging and sensing applications. While both direct and indirect bandgap semiconductor NPs have been studied, control over their emission properties vary. Quantum confinement (QC), which primarily controls the emission wavelength of nanosized semiconductors, dictates that as the size of semiconductor NPs decrease, the magnitude of the bandgap increases, resulting in changes in the observed emission wavelength: smaller NPs have a larger bandgap, and thus a bluer emission. However, surface, interfacial, or shell defects can act as non-radiative or radiative recombination …


Determination Of Enantiomeric Compositions Of Analytes Using Novel Fluorescent Chiral Molecular Micelles And Steady State Fluorescence Measurements, Alicia A. Williams, Sayo O. Fakayode, Onur Alptürk, Christina M. Jones, Mark Lowry, Robert M. Strongin, Isiah M. Warner Mar 2008

Determination Of Enantiomeric Compositions Of Analytes Using Novel Fluorescent Chiral Molecular Micelles And Steady State Fluorescence Measurements, Alicia A. Williams, Sayo O. Fakayode, Onur Alptürk, Christina M. Jones, Mark Lowry, Robert M. Strongin, Isiah M. Warner

Chemistry Faculty Publications and Presentations

Novel fluorescent chiral molecular micelles (FCMMs) were synthesized, characterized, and employed as chiral selectors for enantiomeric recognition of non-fluorescent chiral molecules using steady state fluorescence spectroscopy. The sensitivity of the fluorescence technique allowed for investigation of low concentrations of chiral selector (3.0 x 10(-5) M) and analyte (5.0 x 10(-6) M) to be used in these studies. The chiral interactions of glucose, tartaric acid, and serine in the presence of FCMMs poly(sodium N-undecanoyl-L-tryptophanate) [poly-L-SUW], poly(sodium N-undecanoyl-L-tyrosinate) [poly-L-SUY], and poly(sodium N-undecanoyl-L-phenylalininate) [poly-SUF] were based on diastereomeric complex formation. Poly-L-SUW had a significant fluorescence emission spectral difference as compared to poly-L-SUY and …


Nonlocal Electrodynamic Modeling Of Fluorescence Characteristics For Molecules In A Spherical Cavity, Pui T. Leung, M. H. Hider Nov 2002

Nonlocal Electrodynamic Modeling Of Fluorescence Characteristics For Molecules In A Spherical Cavity, Pui T. Leung, M. H. Hider

Physics Faculty Publications and Presentations

The emission characteristics for molecules in a spherical metallic microcavity are computed using a nonlocal electrodynamic model, based on a theory previously published by Fuchs and Claro [Phys. Rev. B 35, 3722 (1987)] for the multipole polarizability of a sphere. Both radially and tangentially oriented molecules at arbitrary locations inside the cavity are considered, and the results are compared with those from both the local response theory and those for molecules outside a spherical particle. The issue of reciprocity of the solutions for each of the sphere and cavity cases, respectively, is examined in the light of the nonlocal effects. …


Near-Field Fluorescence Microscopy Based On Two-Photon Excitation With Metal Tips, Erik J. Sánchez, Lukas Novotny, X. Sunney Xie May 1999

Near-Field Fluorescence Microscopy Based On Two-Photon Excitation With Metal Tips, Erik J. Sánchez, Lukas Novotny, X. Sunney Xie

Physics Faculty Publications and Presentations

We present a new scheme for near-field fluorescence imaging using a metal tip illuminated with femtosecond laser pulses of proper polarization. The strongly enhanced electric field at the metal tip (ap15 nm end diameter) results in a localized excitation source for molecular fluorescence. Excitation of the sample via two-photon absorption provides good image contrast due to the quadratic intensity dependence. The spatial resolution is shown to be better than that of the conventional aperture technique. We used the technique to image fragments of photosynthetic membranes, as well as j-aggregates with spatial resolutions on the order of 20 nm.


Molecular Fluorescence At A Rough Surface: The Orientation Effects, P.T. Leung, W. L. Blacke Nov 1997

Molecular Fluorescence At A Rough Surface: The Orientation Effects, P.T. Leung, W. L. Blacke

Physics Faculty Publications and Presentations

The problem of the dynamical interaction between an emitting dipole and a metallic grating surface is considered with particular interest in the effects due to different orientations of the dipole with respect to the substrate surface. Our previous perturbative theory is extended to treat both parallel and perpendicular dipoles and the results are applied to the study of modified fluorescence characteristics for admolecules in the vicinity of a rough metal surface modeled as a grating. Numerical results show that some of the characteristics are very sensitive to the molecular orientation and the one along the grating direction is manifested with …


Molecular Fluorescence At A Rough Surface: The Orientation Effects, William Lee Blacke May 1997

Molecular Fluorescence At A Rough Surface: The Orientation Effects, William Lee Blacke

Dissertations and Theses

The interaction between an emitting molecular dipole and a conducting substrate with a periodic surface roughness is looked at with particular interest in the different orientations of the dipole with respect to the substrate surface. A previous dynamical, perturbative theory for the effects of perpendicular dipole is extended to treat a dipole oriented parallel to the surface of the substrate. The results are then applied to study the modified fluorescence characteristics of the emitting dipoles. Numerical results demonstrate that some fluorescence characteristics are extremely sensitive to the molecular orientation with the dipole oriented along the grating (x direction) exhibiting unique …


Decay Of Molecules At Spherical Surfaces: Nonlocal Effects, P.T. Leung Apr 1990

Decay Of Molecules At Spherical Surfaces: Nonlocal Effects, P.T. Leung

Physics Faculty Publications and Presentations

The decay rates for molecules in the vicinity of a metallic sphere are investigated in a phenomenological approach for very close molecule-surface distances d. The Fuchs-Claro model [Phys. Rev. B 35, 3722 (1987)] is adopted to describe the polarizability of the sphere with the nonlocal dielectric response being accounted for within the hydrodynamic description. The results show significant differences when compared with those obtained previously within a local description for dlsim50 Aring, with extra resonances observed in the high-frequency regime, a phenomenon similar to that noted previously by Ruppin (1982), in his calculation of the extinction cross section for such …


Roughness-Induced Resonance For Molecular Fluorescence Near A Corrugated Metallic Surface, P.T. Leung, Young Sik Kim, Thomas F. George Nov 1988

Roughness-Induced Resonance For Molecular Fluorescence Near A Corrugated Metallic Surface, P.T. Leung, Young Sik Kim, Thomas F. George

Physics Faculty Publications and Presentations

Based on a dynamical energy-transfer theory for the molecular decay rate near a rough metallic surface, a new resonance structure is predicted which is mediated by the roughness and which is absent in the static image theory. The implication of this new resonance structure to other phenomena, such as electron-energy-loss spectrum and cross coupling in thin films, is pointed out.


Pressure Dependence Of Fluorescent And Photolytic Interferences In Ho Detection By Laser-Excited Fluorescence, Thomas M. Hard, Robert J. O'Brien, T. B. Cook Jul 1980

Pressure Dependence Of Fluorescent And Photolytic Interferences In Ho Detection By Laser-Excited Fluorescence, Thomas M. Hard, Robert J. O'Brien, T. B. Cook

Chemistry Faculty Publications and Presentations

In the measurement of HO concentrations by laser-excited fluorescence, expansion of the sampled air offers a way to reduce fluorescent and photolytic interference by other species. The decrease in [HO] upon expansion is balanced by an increase in HO fluorescence yield over a wide range of pressures. Background air fluorescence is reduced if the responsible species have fluorescence yields higher than those of HO. Preliminary experiments indicate that most of the fluorescence observed in laboratory air is due to such species. Upon expansion, the suppression of fluorescent interference can be no greater than the reduction in pressure, whereas the suppression …