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Missouri University of Science and Technology

2007

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Articles 1 - 30 of 144

Full-Text Articles in Physical Sciences and Mathematics

Large Energy Gaps In Cac₆ From Tunneling Spectroscopy: Possible Evidence Of Strong-Coupling Superconductivity, Cihan Kurter, Lutfi Ozyuzer, Daniel Mazur, John F. Zasadzinski, Daniel Rosenmann Dec 2007

Large Energy Gaps In Cac₆ From Tunneling Spectroscopy: Possible Evidence Of Strong-Coupling Superconductivity, Cihan Kurter, Lutfi Ozyuzer, Daniel Mazur, John F. Zasadzinski, Daniel Rosenmann

Physics Faculty Research & Creative Works

Tunneling in CaC6 crystals reproducibly reveals superconducting gaps Δ of 2.3±0.2 meV that are ~40% larger than reported earlier. In an isotropic s -wave scenario, that puts CaC6 into the class of very strongly coupled superconductors, since 2Δ k Tc ~4.6, implying that soft Ca phonons are primarily involved in the superconductivity. This conclusion explains the relatively large Ca isotope effect found recently for CaC6, but it could also signal a strong anisotropy in the electron-phonon interaction.


Time-Adaptive Numerical Simulation For High Speed Networks, Suman Kumar, Seung Jong Park, S. Sitharama Iyengar, Jung Han Kimn Dec 2007

Time-Adaptive Numerical Simulation For High Speed Networks, Suman Kumar, Seung Jong Park, S. Sitharama Iyengar, Jung Han Kimn

Computer Science Faculty Research & Creative Works

As the bandwidth of networks is increasing exponentially, the computational cost to simulate such type of networks is also growing in a similar fashion. This paper presents a scalable simulation method, called time-adaptive numerical simulation, which can be used to represent dynamics of high-speed networks using fluid-based models. The new method dynamically adjusts the size of a time step for a numerical solver which solves a system of differential equations representing dynamics of protocols and nodes' behaviors. The simulation results show that the time-adaptive-method reduces the computational time while achieving the same accuracy compared to that of a fixed step-size …


Enlightened Computing: An Architecture For Co-Allocating Network, Compute, And Other Grid Resources For High-End Applications, Lina Battestilli, Andrei Hutanut, Gigi Karmous-Edwards, Daniel S. Katz, Jon Maclarent, Joe Mambretti, John H. Moore, Seung Jong Park, Harry G. Perros, Syam Sundar, Savera Tanwir, Steven R. Thorpe, Yufeng Xin Dec 2007

Enlightened Computing: An Architecture For Co-Allocating Network, Compute, And Other Grid Resources For High-End Applications, Lina Battestilli, Andrei Hutanut, Gigi Karmous-Edwards, Daniel S. Katz, Jon Maclarent, Joe Mambretti, John H. Moore, Seung Jong Park, Harry G. Perros, Syam Sundar, Savera Tanwir, Steven R. Thorpe, Yufeng Xin

Computer Science Faculty Research & Creative Works

Many emerging high-performance applications require distributed infrastructure that is significantly more powerful and flexible than traditional Grids. Such applications require the optimization, close integration, and control of all Grid resources, including networks. The EnLIGHTened (ENL) Computing Project has designed an architectural framework that allows Grid applications to dynamically request (in-advance or on-demand) any type of Grid resource: computers, storage, instruments, and deterministic, high-bandwidth network paths, including lightpaths. Based on application requirements, the ENL middleware communicates with Grid resource managers and, when availability is verified, co-allocates all the necessary resources. ENL's Domain Network Manager controls all network resource allocations to dynamically …


Weak Ferromagnetism In Fe₁₋ₓcoₓsb₂, Rongwei Hu, Raphäel P. Hermann, Fernande Grandjean, Yong Jae Lee, John B. Warren, Vesna F. Mitrovic, Cedomir Petrovic Dec 2007

Weak Ferromagnetism In Fe₁₋ₓcoₓsb₂, Rongwei Hu, Raphäel P. Hermann, Fernande Grandjean, Yong Jae Lee, John B. Warren, Vesna F. Mitrovic, Cedomir Petrovic

Chemistry Faculty Research & Creative Works

Weak ferromagnetism in Fe1-xCoxSb2 is studied by magnetization and Mössbauer measurements. A small spontaneous magnetic moment of the order of ~ 10-3µB appears along the b axis for 0.2 ≤ x ≤ 0.4. Based on a structural analysis, we argue against extrinsic sources of weak ferromagnetism. We discuss our results in the framework of the nearly magnetic electronic structure of the parent compound FeSb2.


Angular And Polarization Analysis Of X-Rays Emitted From Highly-Charged, Few-Electron Ions, Stephan Fritzsche, Andrey S. Surzhykov, Ulrich D. Jentschura, Th H. Stohlker Nov 2007

Angular And Polarization Analysis Of X-Rays Emitted From Highly-Charged, Few-Electron Ions, Stephan Fritzsche, Andrey S. Surzhykov, Ulrich D. Jentschura, Th H. Stohlker

Physics Faculty Research & Creative Works

The recent theoretical progress in studying the x-ray emission from highly-charged, few-electron ions is reviewed. These case studies show that relativistic, high-Z ions provide a unique tool for better understanding the interplay between the electron-photon and electron-electron interactions in strong fields. Most naturally, this interplay is probed by the radiative capture of a (quasi-) free electron into the bound states of projectile ions, and by varying the charge state and the energy of the projectiles. For the capture into initially hydrogen-and lithium-like ions, here we summarize the recent results for the angular distribution and polarization of the recombination photons as …


Ammonia Elimination From Protonated Nucleobases And Related Synthetic Substrates, Ming Qian, Shuo Yang, Hong Wu, Papiya S. Majumdar, Nathan D. Leigh, Rainer Glaser Nov 2007

Ammonia Elimination From Protonated Nucleobases And Related Synthetic Substrates, Ming Qian, Shuo Yang, Hong Wu, Papiya S. Majumdar, Nathan D. Leigh, Rainer Glaser

Chemistry Faculty Research & Creative Works

The results are reported of mass-spectrometric studies of the nucleobases adenine 1h (1, R = H), guanine 2h, and cytosine 3h. The protonated nucleobases are generated by electrospray ionization of adenosine 1r (1, R = ribose), guanosine 2r, and deoxycytidine 3d (3, R = deoxyribose) and their fragmentations were studied with tandem mass spectrometry. In contrast to previous EI-MS studies of the nucleobases, NH3 elimination does present a major path for the fragmentations of the ions [1h + H]+, [2h + H]+, and …


Effects Of Electromagnetic Interference On Control Area Network Performance, Fei Ren, Y. Rosa Zheng, Maciej Jan Zawodniok, Jagannathan Sarangapani Nov 2007

Effects Of Electromagnetic Interference On Control Area Network Performance, Fei Ren, Y. Rosa Zheng, Maciej Jan Zawodniok, Jagannathan Sarangapani

Electrical and Computer Engineering Faculty Research & Creative Works

In this paper, the effects of electromagnetic interference (EMI) on control area network (CAN) communications are investigated by hardware experiments. Distinct CAN bit rates, communication cables, and networks are used to test effects of EMI on CAN bus. Waveforms of CAN data frames in EMI environment are observed and analyzed for figuring out details of effects. Experiments show that the EMI pulses frequently encountered in automobile and off-road machinery can cause the reduction of bit rates and errors in high-speed CAN communications. Replacing traditional unshielded parallel communication cables with shielded communication cables is proved to be an effective method of …


Zeeman Splitting And G Factor Of The 1s²2s²2p ²P3/2 And ²P1/2 Levels In Ar¹³⁺, R. Soria Orts, Jose R. Crespo Lopez-Urrutia, Hjalmar Bruhns, Antonio J. Gonzalez, Zoltan Harman, Ulrich D. Jentschura, Christoph H. Keitel, Alain Lapierre, Hiroyuki Tawara, I. I. Tupitsyn, Joachim Hermann Ullrich, Andrey V. Volotka Nov 2007

Zeeman Splitting And G Factor Of The 1s²2s²2p ²P3/2 And ²P1/2 Levels In Ar¹³⁺, R. Soria Orts, Jose R. Crespo Lopez-Urrutia, Hjalmar Bruhns, Antonio J. Gonzalez, Zoltan Harman, Ulrich D. Jentschura, Christoph H. Keitel, Alain Lapierre, Hiroyuki Tawara, I. I. Tupitsyn, Joachim Hermann Ullrich, Andrey V. Volotka

Physics Faculty Research & Creative Works

The Zeeman line components of the magnetic-dipole (M1) 1s2 2s2 2 P1/2 -2P3/2 transition in boronlike Ar13+ were experimentally resolved by high-precision emission spectroscopy using the Heidelberg electron beam ion trap. We determined the gyromagnetic (g) factors of the ground and first-excited levels to be g1/2 =0.663(7) and g3/2 =1.333(2), respectively. This corresponds to a measurement of the g factor of a relativistic electron in a bound non- S state of a multielectron ion with a 1.5 parts-per-thousand accuracy. The results are compared to theoretical calculations by means of the configuration …


Matched Filtering And Parameter Estimation Of Ringdown Waveforms, Emanuele Berti, Jaime Cardoso, Vitor Cardoso, Marco Cavaglia Nov 2007

Matched Filtering And Parameter Estimation Of Ringdown Waveforms, Emanuele Berti, Jaime Cardoso, Vitor Cardoso, Marco Cavaglia

Physics Faculty Research & Creative Works

Using recent results from numerical relativity simulations of nonspinning binary black hole mergers, we revisit the problem of detecting ringdown waveforms and of estimating the source parameters, considering both LISA and Earth-based interferometers. We find that Advanced LIGO and EGO could detect intermediate-mass black holes of mass up to ∼103M out to a luminosity distance of a few Gpc. For typical multipolar energy distributions, we show that the single-mode ringdown templates presently used for ringdown searches in the LIGO data stream can produce a significant event loss ( > 10% for all detectors in a large interval of …


Two-Center Interference In P-H2 Electron-Transfer Collisions, Daniel Fischer, M. Gudmundsson, Kristian Stochkel, Zoltan Berenyi, Henrik Cederquist, Nicole Haag, Henrik A B Johansson, Sergey B. Levin, Peter Reinhed, Reinhold S. Schuch, Henning T. Schmidt Nov 2007

Two-Center Interference In P-H2 Electron-Transfer Collisions, Daniel Fischer, M. Gudmundsson, Kristian Stochkel, Zoltan Berenyi, Henrik Cederquist, Nicole Haag, Henrik A B Johansson, Sergey B. Levin, Peter Reinhed, Reinhold S. Schuch, Henning T. Schmidt

Physics Faculty Research & Creative Works

We report on measurements of transfer excitation in collisions of 0.3-1.3 MeV protons with spatially oriented H2 molecules. Evidences of two center interference are found in the angular distribution of the molecule after a transfer excitation process and directly in the projectile angular scattering distributions. These features can be explained in a way which is analogous to that for the interferences in Young's classical double slit experiment: The fast projectiles preferentially capture electrons close to either of the molecular nuclei, and thereby they change their momenta and de Broglie wavelengths. The waves emerging from the two 'slits' of the …


Coincidence Angular Correlation In Electron Impact Single Or Double Ionisation Of Atoms And Molecules, E. M. Staicu-Casagrande, Adnan Naja, Xueguang Ren, Mohammed Nekkab, Fabrice Catoire, F. Mezdari, Azzeddine Lahmam-Bennani, Don H. Madison, Ochbadrakh Chuluunbaatar, Boghos B. Joulakian Nov 2007

Coincidence Angular Correlation In Electron Impact Single Or Double Ionisation Of Atoms And Molecules, E. M. Staicu-Casagrande, Adnan Naja, Xueguang Ren, Mohammed Nekkab, Fabrice Catoire, F. Mezdari, Azzeddine Lahmam-Bennani, Don H. Madison, Ochbadrakh Chuluunbaatar, Boghos B. Joulakian

Physics Faculty Research & Creative Works

Experimental results obtained with our multi-parameter multi-coincidence spectrometer are presented for the (e,3e) double ionisation of Ar and (e,2e) single ionisation of small molecules. The (e,3e) measurements are discussed in terms of competition between the two double ionisation processes present under the chosen kinematics, and qualitative conclusions are given. The results for the ionisation of H2 and the outer orbital of N2 are compared with the predictions of the most elaborate available theoretical models for description of the molecular ionisation process. Overall reasonable agreement is observed and tentative interpretations for the discrepancies are discussed.


Predictive Congestion Control Protocol For Wireless Sensor Networks, Maciej Jan Zawodniok, Jagannathan Sarangapani Nov 2007

Predictive Congestion Control Protocol For Wireless Sensor Networks, Maciej Jan Zawodniok, Jagannathan Sarangapani

Electrical and Computer Engineering Faculty Research & Creative Works

Available congestion control schemes, for example transport control protocol (TCP), when applied to wireless networks, result in a large number of packet drops, unfair scenarios and low throughputs with a significant amount of wasted energy due to retransmissions. To fully utilize the hop by hop feedback information, this paper presents a novel, decentralized, predictive congestion control (DPCC) for wireless sensor networks (WSN). The DPCC consists of an adaptive flow and adaptive back-off interval selection schemes that work in concert with energy efficient, distributed power control (DPC). The DPCC detects the onset of congestion using queue utilization and the embedded channel …


⁵⁷Fe Mössbauer Spectral And Muon Spin Relaxation Study Of The Magnetodynamics Of Monodispersed Γ-Fe₂O₃ Nanoparticles, Leïla Rebbouh, Raphäel P. Hermann, Fernande Grandjean, Taeghwan Hyeon, Kwangjin An, Alex Amato, Gary J. Long Nov 2007

⁵⁷Fe Mössbauer Spectral And Muon Spin Relaxation Study Of The Magnetodynamics Of Monodispersed Γ-Fe₂O₃ Nanoparticles, Leïla Rebbouh, Raphäel P. Hermann, Fernande Grandjean, Taeghwan Hyeon, Kwangjin An, Alex Amato, Gary J. Long

Chemistry Faculty Research & Creative Works

The Mössbauer spectra of monodispersed iron oxide nanoparticles with diameters of 4, 7, 9, and 11 nm have been measured between 4.2 and 315 K and fitted within the formalism for stochastic fluctuations of the hyperfine Hamiltonian. In this model, the hyperfine field is assumed to relax between the six ±x, ±y, and ±z directions in space with a distribution of relaxation rates that is temperature dependent. Muon spin relaxation measurements have been carried out on the 9 nm particles between 4.2 and 295 K. Both techniques reveal three regimes in the magnetic dynamics of these nanoparticles. In the low-temperature …


Alternative Splicing: Associating Frequency With Isoforms, Anuradha Roy, Jennifer Leopold, Anne M. Maglia Oct 2007

Alternative Splicing: Associating Frequency With Isoforms, Anuradha Roy, Jennifer Leopold, Anne M. Maglia

Computer Science Faculty Research & Creative Works

In the simplest model of protein production, a gene gives rise to a single protein; DNA is transcribed to form pre-mRNA, which is converted to mRNA by splicing or removing introns. The result is a chain of exons that is translated to form a protein. Alternative splicing of exons may result in the formation of multiple proteins from the same gene sequence. However, not all of these proteins may be functional. Thus, we ask whether we can predict and rank (in order of frequency of occurrence and functional importance) the set of possible proteins for a gene. Herein we describe …


Antimony Vibrations In Skutterudites Probed By ¹²¹Sb Nuclear Inelastic Scattering, Hans Christian Wille, Raphäel P. Hermann, Ilya Sergueev, Olaf Leupold, Peter Van Der Linden, Brian C. Sales, Fernande Grandjean, Gary J. Long, Rudolf Rüffer, Yuri V. Shvyd'ko Oct 2007

Antimony Vibrations In Skutterudites Probed By ¹²¹Sb Nuclear Inelastic Scattering, Hans Christian Wille, Raphäel P. Hermann, Ilya Sergueev, Olaf Leupold, Peter Van Der Linden, Brian C. Sales, Fernande Grandjean, Gary J. Long, Rudolf Rüffer, Yuri V. Shvyd'ko

Chemistry Faculty Research & Creative Works

The specific lattice dynamic properties of antimony in the unfilled CoSb3 and filled EuFe4Sb12 skutterudites have been determined by nuclear inelastic scattering at the 121Sb nuclear resonance energy of 37.1298(2) keV with a 4.5 meV high-resolution backscattering sapphire monochromator. The Sb partial vibrational density of states (DOS) shows a maximum centered at 17 and 16 meV in CoSb3 and EuFe4Sb12, respectively. The difference between the Sb DOSs of CoSb3 and EuFe4Sb12 reveals that upon filling there is a transfer of 10% of the vibrational states toward …


Use Of Max-Flow On Facts Devices, Adam Lininger, Bruce M. Mcmillin, Badrul H. Chowdhury, Mariesa Crow Oct 2007

Use Of Max-Flow On Facts Devices, Adam Lininger, Bruce M. Mcmillin, Badrul H. Chowdhury, Mariesa Crow

Computer Science Faculty Research & Creative Works

FACTS devices can be used to mitigate cascading failures in a power grid by controlling the power flow in individual lines. Placement and control are significant issues. We present a procedure for determining whether a scenario can be mitigated using the concept of maximum flow. If it can be mitigated, we determine what placement and control setting will solve the scenario. This paper treats fourteen cascading failure scenarios and reports on the use of the max-flow algorithm both in determining the mitigation of each scenario and in finding FACTS settings that will mitigate the scenario.


Comparisons Of An Adaptive Neural Network Based Controller And An Optimized Conventional Power System Stabilizer, Wenxin Liu, Ganesh K. Venayagamoorthy, Jagannathan Sarangapani, Donald C. Wunsch, Mariesa Crow, Li Liu, David A. Cartes Oct 2007

Comparisons Of An Adaptive Neural Network Based Controller And An Optimized Conventional Power System Stabilizer, Wenxin Liu, Ganesh K. Venayagamoorthy, Jagannathan Sarangapani, Donald C. Wunsch, Mariesa Crow, Li Liu, David A. Cartes

Electrical and Computer Engineering Faculty Research & Creative Works

Power system stabilizers are widely used to damp out the low frequency oscillations in power systems. In power system control literature, there is a lack of stability analysis for proposed controller designs. This paper proposes a Neural Network (NN) based stabilizing controller design based on a sixth order single machine infinite bus power system model. The NN is used to compensate the complex nonlinear dynamics of power system. To speed up the learning process, an adaptive signal is introduced to the NN's weights updating rule. The NN can be directly used online without offline training process. Magnitude constraint of the …


Hydrological Monitoring With Hybrid Sensor Networks, Thomas V. Freiberger, Sahra Sedigh, Estella A. Atekwana Oct 2007

Hydrological Monitoring With Hybrid Sensor Networks, Thomas V. Freiberger, Sahra Sedigh, Estella A. Atekwana

Electrical and Computer Engineering Faculty Research & Creative Works

Existing hydrological monitoring systems suffer from short- comings in accuracy, resolution, and scalability. Their fragility, high power consumption, and lack of autonomy necessitate frequent site visits. Cabling requirements and large size limit their scalability and make them prohibitively expensive. The research described in this paper proposes to alleviate these problems by pairing high-resolution in situ measure- ment with remote data collection and software maintenance. A hybrid sensor network composed of wired and wireless connections autonomously measures various attributes of the soil, including moisture, temperature, and resistivity. The mea- surements are communicated to a processing server over the existing GSM cellular …


Neural Network Based Decentralized Controls Of Large Scale Power Systems, Wenxin Liu, Jagannathan Sarangapani, Ganesh K. Venayagamoorthy, Donald C. Wunsch, Mariesa Crow, Li Liu, David A. Cartes Oct 2007

Neural Network Based Decentralized Controls Of Large Scale Power Systems, Wenxin Liu, Jagannathan Sarangapani, Ganesh K. Venayagamoorthy, Donald C. Wunsch, Mariesa Crow, Li Liu, David A. Cartes

Electrical and Computer Engineering Faculty Research & Creative Works

This paper presents a suite of neural network (NN) based decentralized controller designs for large scale power systems' generators, one is for the excitation control and the other is for the steam valve control. Though the control inputs are calculated using local signals, the transient and overall system stability can be guaranteed. NNs are used to approximate the unknown and/or imprecise dynamics of the local power system dynamics and the inter-connection terms, thus the requirements for exact system parameters are relaxed. Simulation studies with a three-machine power system demonstrate the effectiveness of the proposed controller designs.


Energy-Efficient Hybrid Key Management Protocol For Wireless Sensor Networks, Timothy J. Landstra, Maciej Jan Zawodniok, Jagannathan Sarangapani Oct 2007

Energy-Efficient Hybrid Key Management Protocol For Wireless Sensor Networks, Timothy J. Landstra, Maciej Jan Zawodniok, Jagannathan Sarangapani

Electrical and Computer Engineering Faculty Research & Creative Works

In this paper, we propose a subnetwork key management strategy in which the heterogeneous security requirements of a wireless sensor network are considered to provide differing levels of security with minimum communication overhead. Additionally, it allows the dynamic creation of high security subnetworks within the wireless sensor network and provides subnetworks with a mechanism for dynamically creating a secure key using a novel and dynamic group key management protocol. The proposed energy-efficient protocol utilizes a combination of pre-deployed group keys and initial trustworthiness of nodes to create a level of trust between neighbors in the network. This trust is later …


Control Of Nonholonomic Mobile Robot Formations Using Neural Networks, Jagannathan Sarangapani, Travis Alan Dierks Oct 2007

Control Of Nonholonomic Mobile Robot Formations Using Neural Networks, Jagannathan Sarangapani, Travis Alan Dierks

Electrical and Computer Engineering Faculty Research & Creative Works

In this paper the control of formations of multiple nonholonomic mobile robots is attempted by integrating a kinematic controller with a neural network (NN) computed-torque controller. A combined kinematic/torque control law is developed for leader-follower based formation control using backstepping in order to accommodate the dynamics of the robots and the formation in contrast with kinematic-based formation controllers. The NN is introduced to approximate the dynamics of the follower as well as its leader using online weight tuning. It is shown using Lyapunov theory that the errors for the entire formation are uniformly ultimately bounded, and numerical results are provided.


Triple-Differential Cross Sections For Target Ionization With Simultaneous Projectile Detachment In 200-Kev H⁻ + He Collisions, T. Ferger, Michael Schulz, Daniel Fischer, B. Najjari, R. Moshammer, J. D. Ullrich Oct 2007

Triple-Differential Cross Sections For Target Ionization With Simultaneous Projectile Detachment In 200-Kev H⁻ + He Collisions, T. Ferger, Michael Schulz, Daniel Fischer, B. Najjari, R. Moshammer, J. D. Ullrich

Physics Faculty Research & Creative Works

We have performed a kinematically complete experiment for target ionization with simultaneous projectile detachment (TIPD) in 200-keV H + He collisions. From the data we extracted triple-differential cross sections (TDCSs) for each electron separately. These TDCSs closely resemble corresponding data for single ionization by charged-particle impact. Surprisingly, the contributions from higher-order processes to TIPD, proceeding through two independent interactions of each electron with the core of the respective other collision partner, are found to be somewhat larger than the first-order process proceeding through the electron-electron interaction.


Computing Quantum Phase Transitions, Thomas Vojta Oct 2007

Computing Quantum Phase Transitions, Thomas Vojta

Physics Faculty Research & Creative Works

This article first gives a concise introduction to quantum phase transitions, emphasizing similarities with and differences to classical thermal transitions. After pointing out the computational challenges posed by quantum phase transitions, a number of successful computational approaches is discussed. The focus is on classical and quantum Monte Carlo methods, with the former being based on the quantum-to classical mapping while the latter directly attack the quantum problem. These methods are illustrated by several examples of quantum phase transitions in clean and disordered systems.


Analysis Of Two-Dimensional High-Energy Photoelectron Momentum Distributions In The Single Ionization Of Atoms By Intense Laser Pulses, Zhangjin Chen, Toru Morishita, Anh-Thu Le, C. D. Lin Oct 2007

Analysis Of Two-Dimensional High-Energy Photoelectron Momentum Distributions In The Single Ionization Of Atoms By Intense Laser Pulses, Zhangjin Chen, Toru Morishita, Anh-Thu Le, C. D. Lin

Physics Faculty Research & Creative Works

We analyzed the two-dimensional (2D) electron momentum distributions of high-energy photoelectrons of atoms in an intense laser field using the second-order strong field approximation (SFA2). The SFA2 accounts for the rescattering of the returning electron with the target ion to first order and its validity is established by comparing with results obtained by solving the time-dependent Schrödinger equation for short pulses. By analyzing the SFA2 theory, we confirmed that the yield along the back rescattered ridge in the 2D momentum spectra can be interpreted as due to the elastic scattering in the backward directions by the returning electron wave packet. …


Determining Domain Similarity And Domain-Protein Similarity Using Functional Similarity Measurements Of Gene Ontology Terms, Lisa Michelle Guntly, Jennifer Leopold, Anne M. Maglia Oct 2007

Determining Domain Similarity And Domain-Protein Similarity Using Functional Similarity Measurements Of Gene Ontology Terms, Lisa Michelle Guntly, Jennifer Leopold, Anne M. Maglia

Computer Science Faculty Research & Creative Works

Protein domains typically correspond to major functional sites of a protein. Therefore, determining similarity between domains can aid in the comparison of protein functions, and can provide a basis for grouping domains based on function. One strategy for comparing domain similarity and domain-protein similarity is to use similarity measurements of annotation terms from the Gene Ontology (GO). In this paper five methods are analyzed in terms of their usefulness for comparing domains, and comparing domains to proteins based on GO terms.


Blueprint For Iteratively Hardening Power Grids Employing Unified Power Flow Controllers, William M. Siever, Ann K. Miller, Daniel R. Tauritz Sep 2007

Blueprint For Iteratively Hardening Power Grids Employing Unified Power Flow Controllers, William M. Siever, Ann K. Miller, Daniel R. Tauritz

Electrical and Computer Engineering Faculty Research & Creative Works

A stable electricity supply is vital for modern society. However, many parts of our power transmission grid are operating near their operational limits. Such stressed systems are vulnerable to cascading failures, where a few small faults can induce a cascade of failures potentially leading to a major blackout The unified power flow controller (UPFC), the most powerful highspeed, semi-conductor based power flow device, can be used as a theoretical model to study how these devices can be used to improve power grid resilience. The blueprint presented here can be used to iteratively identify critical weaknesses in power grids and to …


Asymptotic Behavior Of The Global Attractors To The Boussinesq System For Rayleigh-Bénard Convection At Large Prandtl Number, Xiaoming Wang Sep 2007

Asymptotic Behavior Of The Global Attractors To The Boussinesq System For Rayleigh-Bénard Convection At Large Prandtl Number, Xiaoming Wang

Mathematics and Statistics Faculty Research & Creative Works

We study asymptotic behavior of the global attractors to the Boussinesq system for Rayleigh-Bénard convection at large Prandtl number. in particular, we show that the global attractors to the Boussinesq system for Rayleigh-Bénard convection converge to that of the infinite-Prandtl- number model for convection as the Prandtl number approaches infinity. This offers partial justification of the infinite-Prandtl-number model for convection as a valid simplified model for convection at large Prandtl number even in the long-time regime. © 2006 Wiley Periodicals, Inc.


Reliability Modeling For The Advanced Electric Power Grid, Ayman Z. Faza, Sahra Sedigh, Bruce M. Mcmillin Sep 2007

Reliability Modeling For The Advanced Electric Power Grid, Ayman Z. Faza, Sahra Sedigh, Bruce M. Mcmillin

Electrical and Computer Engineering Faculty Research & Creative Works

The advanced electric power grid promises a self-healing infrastructure using distributed, coordinated, power electronics control. One promising power electronics device, the Flexible AC Transmission System (FACTS), can modify power flow locally within a grid. Embedded computers within the FACTS devices, along with the links connecting them, form a communication and control network that can dynamically change the power grid to achieve higher dependability. The goal is to reroute power in the event of transmission line failure. Such a system, over a widespread area, is a cyber-physical system. The overall reliability of the grid is a function of the respective reliabilities …


Microbial Nanowires: Is The Subsurface "Hardwired"?, Dimitrios Ntarlagiannis, Estella A. Atekwana, Eric A. Hill, Yuri A. Gorby Sep 2007

Microbial Nanowires: Is The Subsurface "Hardwired"?, Dimitrios Ntarlagiannis, Estella A. Atekwana, Eric A. Hill, Yuri A. Gorby

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The Earth's shallow subsurface results from integrated biological, geochemical, and physical processes. Methods are sought to remotely assess these interactive processes, especially those catalysed by micro-organisms. Using saturated sand columns and the metal reducing bacterium Shewanella oneidensis MR-1, we show that electrically conductive appendages called bacterial nanowires are directly associated with electrical potentials. No significant electrical potentials were detectable in columns inoculated with mutant strains that produced non-conductive appendages. Scanning electron microscopy imaging revealed a network of nanowires linking cells-cells and cells to mineral surfaces, "hardwiring" the entire length of the column. We hypothesize that the nanowires serve as conduits …


Blue Nile Incision On The Ethiopian Plateau: Pulsed Plateau Growth, Pliocene Uplift, And Hominin Evolution, Nahid D.S. Gani, M. Royhan Gani, Mohamed G. Abdel Salam Sep 2007

Blue Nile Incision On The Ethiopian Plateau: Pulsed Plateau Growth, Pliocene Uplift, And Hominin Evolution, Nahid D.S. Gani, M. Royhan Gani, Mohamed G. Abdel Salam

Geosciences and Geological and Petroleum Engineering Faculty Research & Creative Works

The 1.6-km-deep Gorge of the Nile, a rival of the Grand Canyon, resulted from the deep incision of the Blue Nile drainage into the uplifted Ethiopian Plateau. Understanding the incision history of the plateau is crucial to unraveling the Cenozoic tectonoclimatic evolution of the region, particularly because the region has long been used as a natural laboratory to understand the geodynamics of continental rifting and the evolution of hominins. We undertake a quantitative geomorphologic approach integrating field, geographic information system (GIS), and digital elevation model (DEM) data to analyze incision (volume, long-term rates, and spatiotemporal variability) and river longitudinal profiles …