Physical Sciences and Mathematics Commons^™

Testing Diagnostics Of Nuclear Activity And Star Formation In Galaxies At Z > 1, Jonathan R. Trump, Nicholas P. Konidaris, Guillermo Barro, David C. Koo, Dale D. Kocevski, Stéphanie Juneau, Benjamin J. Weiner, S. M. Faber, Ian S. Mclean, Renbin Yan, Pablo G. Pérez-González, Victor Villar

Physics and Astronomy Faculty Publications

We present some of the first science data with the new Keck/MOSFIRE instrument to test the effectiveness of different AGN/SF diagnostics at z ~ 1.5. MOSFIRE spectra were obtained in three H-band multi-slit masks in the GOODS-S field, resulting in 2 hr exposures of 36 emission-line galaxies. We compare X-ray data with the traditional emission-line ratio diagnostics and the alternative mass-excitation and color-excitation diagrams, combining new MOSFIRE infrared data with previous HST/WFC3 infrared spectra (from the 3D-HST survey) and multiwavelength photometry. We demonstrate that a high [O III]/Hβ ratio is insufficient as an active galactic nucleus (AGN) indicator …

The Central Molecular Gas Structure In Liners With Low-Luminosity Active Galactic Nuclei: Evidence For Gradual Disappearance Of The Torus, F. Müller-Sánchez, M. A. Prieto, M. Mezcua, R. I. Davies, M. A. Malkan, Moshe Elitzur

Physics and Astronomy Faculty Publications

We present observations of the molecular gas in the nuclear environment of three prototypical low-luminosity active galactic nuclei (LLAGNs), based on VLT/SINFONI AO-assisted integral-field spectroscopy of H₂ 1-0 S(1) emission at angular resolutions of ~0.''17. On scales of 50-150 pc, the spatial distribution and kinematics of the molecular gas are consistent with a rotating thin disk, where the ratio of rotation (V) to dispersion (σ) exceeds unity. However, in the central 50 pc, the observations reveal a geometrically and optically thick structure of molecular gas (V/σ < 1 and N _H > 10²³ cm^{–2 …}

Lack Of P53 Affects The Expression Of Several Brain Mitochondrial Proteins: Insights From Proteomics Into Important Pathways Regulated By P53, Ada Fiorini, Rukhsana Sultana, Eugenio Barone, Giovanna Cenini, Marzia Perluigi, Cesare Mancuso, Jian Cai, Jon B. Klein, Daret K. St. Clair, D. Allan Butterfield

Chemistry Faculty Publications

The tumor suppressor protein p53 has been described "as the guardian of the genome" for its crucial role in regulating the transcription of numerous genes responsible for cells cycle arrest, senescence, or apoptosis in response to various stress signals. Although p53 promotes longevity by decreasing the risk of cancer through activation of apoptosis or cellular senescence, several findings suggest that an increase of its activity may have deleterious effects leading to selected aspects of the aging phenotype and neurodegenerative diseases. There is the link between p53 and oxidative stress, the latter a crucial factor that contributes to neurodegenerative processes like …

Terrain Analysis For Locating Erosion Channels: Assessing Lidar Data And Flow Direction Algorithm, Adam Pike, Tom Muller, Eduardo Abel Rienzi, Surendran Neelakantan, Blazan Mijatovic, Anastasios D. Karathanasis, Marcos Rodrigues

Plant and Soil Sciences Faculty Publications

No abstract provided.

Two-Component Structure Of The HΒ Broad-Line Region In Quasars. I. Evidence From Spectral Principal Component Analysis, Chen Hu, Jian-Min Wang, Luis C. Ho, Gary J. Ferland, Jack A. Baldwin, Ye Wang

Physics and Astronomy Faculty Publications

We report on a spectral principal component analysis (SPCA) of a sample of 816 quasars, selected to have small Fe II velocity shifts with spectral coverage in the rest wavelength range 3500-5500 Å. The sample is explicitly designed to mitigate spurious effects on SPCA induced by Fe II velocity shifts. We improve the algorithm of SPCA in the literature and introduce a new quantity, the fractional-contribution spectrum, that effectively identifies the emission features encoded in each eigenspectrum. The first eigenspectrum clearly records the power-law continuum and very broad Balmer emission lines. Narrow emission lines dominate the second eigenspectrum. The …

Strategies To Minimize The Effects Of Drought, Gary Bates

Kentucky Grazing Conference

As this summer has shown, forage production from cool-season pasture and hay fields across the state can be dramatically affected by drought. Pastures that consist of cool-season grasses like tall fescue and orchardgrass have been severely overgrazed, and many may have lost some significant stand. Even if you have reseeded these fields, the question is how to prevent having the same problem next year. One of the best practices is to develop a forage program that doesn’t rely on cool-season grasses for summer production, but selects forage species that are better able to produce during periods of limited rainfall and …

Grassfed Beef From A Global Perspective, Glen Aiken

Kentucky Grazing Conference

Beef production and marketing has been shifting over the last few decades in response to unstable cattle markets, higher input costs, and a need to better meet market demands. Advancement of vertical integration of the production and marketing of beef calves through retained ownership from suckling calf to feedyard has certainly enhanced the genetics of the U.S. beef herd and improved the consistency of beef products. Another shift in production has been an increased number of grassfed cattle (grass finished) for marketing either organic or locally grown beef. These niche markets have developed primarily from concerns of urban consumers regarding …

The Cost Of Pasture Versus Hay, Kenneth H. Burdine

Kentucky Grazing Conference

Whenever I discuss the economics of grazing, I like to start by thinking about hay production costs. Regardless of which species we are talking about, a livestock producer should know what his / her most expensive feeding days are. In most cases, these will be winter feeding days, and that will generally consist of feeding either purchased or home-grown hay. So, I encourage producers to start by getting a solid feel for what their daily winter feeding costs are. For the purposes of this article, I am going to present some specific estimates for winter feeding costs, and other items, …

Pastures For Horses, Robert Coleman

Kentucky Grazing Conference

For horse owners, the use of pasture in the daily management of their horses provides both exercise for the horses, but also is a valuable source of nutrients. Horse feeding programs are based on forage and pasture is an excellent means to supply nutrients. To make effective use of the forage, horse owners need to manage both the horse and the grass.

Winter Annuals And Short Term Perennials For Grazing, S. Ray Smith

Kentucky Grazing Conference

During the last 5 years there has been a renewed interest in winter annual and short term perennials for grazing and for stored feed. There are many sources of information on this subject. I especially encourage you to read the new publication written by Dr. Garry Lacefield and colleagues, “Extending Grazing and Reducing Stored Feed Needs”. I have used information from this publication and other publications from the University of Kentucky Forage Website (www.uky.edu/Ag/Forage) in writing this article. This website contains many use publications on the subject of winter annuals and variety trial information on annual ryegrass and …

Novel Endophyte Tall Fescue, Garry D. Lacefield

Kentucky Grazing Conference

“Novel” endophyte is a term used to describe a “good” or “friendly” fungus (endophyte) in tall fescue as opposed to the endophyte that’s present if over eighty-five percent of the tall fescue in the Fescue Belt of the USA. This endophyte is costing beef producers an estimated $1 Billion dollars in losses from animal gains, reproduction and overall performance.

Forages On My Farm, Brent White

Kentucky Grazing Conference

No abstract provided.

Foreword And Kfgc Award Winners [2012], Garry D. Lacefield, Christi L. Forsythe

Kentucky Grazing Conference

No abstract provided.

Organics In Environmental Ices: Sources, Chemistry, And Impacts, V. F. Mcneill, A. M. Grannas, J. P. D. Abbatt, M. Ammann, P. Ariya, T. Bartels-Rausch, F. Domine, D. J. Donaldson, Marcelo I. Guzman, D. Heger, T. F. Kahan, P. Klán, S. Masclin, C. Toubin, D. Voisin

Chemistry Faculty Publications

The physical, chemical, and biological processes involving organics in ice in the environment impact a number of atmospheric and biogeochemical cycles. Organic material in snow or ice may be biological in origin, deposited from aerosols or atmospheric gases, or formed chemically in situ. In this manuscript, we review the current state of knowledge regarding the sources, properties, and chemistry of organic materials in environmental ices. Several outstanding questions remain to be resolved and fundamental data gathered before an accurate model of transformations and transport of organic species in the cryosphere will be possible. For example, more information is needed regarding …

Rat Brain Pro-Oxidant Effects Of Peripherally Administered 5 Nm Ceria 30 Days After Exposure, Sarita S. Hardas, Rukhsana Sultana, Govind Warrier, Mo Dan, Rebecca L. Florence, Peng Wu, Eric A. Grulke, Michael T. Tseng, Jason M. Unrine, Uschi M. Graham, Robert A. Yokel, D. Allan Butterfield

Chemistry Faculty Publications

The objective of this study was to determine the residual pro-or anti-oxidant effects in rat brain 30 days after systemic administration of a 5 nm citrate-stabilized ceria dispersion. A ∼4% aqueous ceria dispersion was iv-infused (0 or 85 mg/kg) into rats which were terminated 30 days later. Ceria concentration, localization, and chemical speciation in the brain was assessed by inductively coupled plasma mass spectrometry (ICP-MS), light and electron microscopy (EM), and electron energy loss spectroscopy (EELS), respectively. Pro- or anti-oxidant effects were evaluated by measuring levels of protein carbonyls (PC), 3-nitrotyrosine (3NT), and protein-bound-4-hydroxy-2-trans-nonenal (HNE) in the hippocampus, cortex, and …

Kentucky Water Resources Research Institute Center Of Excellence For Watershed Management Watershed Summit Summary Report, Kentucky Water Resources Research Institute, University Of Kentucky

KWRRI Research Reports

No abstract provided.

Pumping Up The [N I] Nebular Lines, Gary J. Ferland, W. J. Henney, C. R. O'Dell, R. L. Porter, P. A. M. Vanhoof, R. J. R. Williams

Physics and Astronomy Faculty Publications

The optical [N I] doublet near 5200 Å is anomalously strong in a variety of emission-line objects. We compute a detailed photoionization model and use it to show that pumping by far-ultraviolet (FUV) stellar radiation previously posited as a general explanation applies to the Orion Nebula (M42) and its companion M43; but, it is unlikely to explain planetary nebulae and supernova remnants. Our models establish that the observed nearly constant equivalent width of [N I] with respect to the dust-scattered stellar continuum depends primarily on three factors: the FUV to visual-band flux ratio of the stellar population, the optical properties …

Improved He I Emissivities In The Case B Approximation, R. L. Porter, Gary J. Ferland, P. J. Storey, M. J. Detisch

Physics and Astronomy Faculty Publications

We update our prior work on the case B collisional-recombination spectrum of He i to incorporate ab initio photoionization cross-sections. This large set of accurate, self-consistent cross-sections represents a significant improvement in He i emissivity calculations because it largely obviates the piecemeal nature that has marked all modern works. A second, more recent set of ab initio cross-sections is also available, but we show that those are less consistent with bound-bound transition probabilities than our adopted set. We compare our new effective recombination coefficients with our prior work and our new emissivities with those by other researchers, and we conclude …

A Support Vector Machine Based Test For Incongruence Between Sets Of Trees In Tree Space, David C. Haws, Peter Huggins, Eric M. O'Neill, David W. Weisrock, Ruriko Yoshida

Statistics Faculty Publications

BACKGROUND: The increased use of multi-locus data sets for phylogenetic reconstruction has increased the need to determine whether a set of gene trees significantly deviate from the phylogenetic patterns of other genes. Such unusual gene trees may have been influenced by other evolutionary processes such as selection, gene duplication, or horizontal gene transfer.

RESULTS: Motivated by this problem we propose a nonparametric goodness-of-fit test for two empirical distributions of gene trees, and we developed the software GeneOut to estimate a p-value for the test. Our approach maps trees into a multi-dimensional vector space and then applies support vector machines (SVMs) …

Residual Cooling And Persistent Star Formation Amid Active Galactic Nucleus Feedback In Abell 2597, G. R. Tremblay, C. P. O'Dea, S. A. Baum, T. E. Clarke, C. L. Sarazin, J. N. Bregman, F. Combes, M. Donahue, A. C. Edge, A. C. Fabian, Gary J. Ferland, B. R. Mcnamara, R. Mittal, J. B. R. Oonk, A. C. Quillen, H. R. Russell, J. S. Sanders, P. Salomé, G. M. Voit, R. J. Wilman, M. W. Wise

Physics and Astronomy Faculty Publications

New Chandra X-ray and Herschel Far-Infrared (FIR) observations enable a multiwavelength study of active galactic nucleus (AGN) heating and intracluster medium (ICM) cooling in the brightest cluster galaxy (BCG) of Abell 2597 (z= 0.0821). The new Chandra observations reveal the central ≲30 kpc X-ray cavity network to be more extensive than previously thought, and associated with enough enthalpy to theoretically inhibit the inferred classical cooling flow. Nevertheless, we present new evidence, consistent with previous results, that a moderately strong residual cooling flow is persisting at 4–8 per cent of the classically predicted rates in a spatially structured manner …

A Proposed Methodology For Pairwise Comparison Of Treatment Levels In A Functional Data Setting, Olga A. Vsevolozhskaya, Mark C. Greenwood, Dmitri B. Holodov

Olga A. Vsevolozhskaya

An effect of procaine (novocaine) on the structural and functional properties of somatic cell membranes was studied based on erythrocyte acidity resistance. To study the effect of different levels of procaine (novocaine) in the bloodstream, the dynamics of the red blood cells rupture was measured after the addition of hydrochloric acid to the red blood cell suspension. The measurements were taken every 15 seconds for 12 minutes. Since the response was sampled at a high frequency, it can be regarded as functional data. One of the research questions was to compare rates of hemolysis under different procaine (novocaine) dosages. We …

Lipopolysaccharide Impairs Amyloid Β Efflux From Brain: Altered Vascular Sequestration, Cerebrospinal Fluid Reabsorption, Peripheral Clearance And Transporter Function At The Blood-Brain Barrier, Michelle A. Erickson, Pehr E. Hartvigson, Yoichi Morofuji, Joshua B. Owen, D. Allan Butterfield, William A. Banks

Chemistry Faculty Publications

BACKGROUND: Defects in the low density lipoprotein receptor-related protein-1 (LRP-1) and p-glycoprotein (Pgp) clearance of amyloid beta (Aβ) from brain are thought to contribute to Alzheimer's disease (AD). We have recently shown that induction of systemic inflammation by lipopolysaccharide (LPS) results in impaired efflux of Aβ from the brain. The same treatment also impairs Pgp function. Here, our aim is to determine which physiological routes of Aβ clearance are affected following systemic inflammation, including those relying on LRP-1 and Pgp function at the blood-brain barrier.

METHODS: CD-1 mice aged between 6 and 8 weeks were treated with 3 intraperitoneal injections …

Synthetic Approaches To Organometallic Complexes For Electronics Applications, Ilya V. Vinogradov

Kaleidoscope

No abstract provided.

Effects Of Mining Reclamation On Sediment Yield And Organic Carbon Flux In First Order Watersheds, Zoe E. Bezold

Kaleidoscope

No abstract provided.

Concentration Effects And Ion Properties Controlling The Fractionation Of Halides During Aerosol Formation, Marcelo I. Guzman, Richa R. Athalye, Jose M. Rodriguez

Chemistry Faculty Publications

During the aerosolization process at the sea surface, halides are incorporated into aerosol droplets, where they may play an important role in tropospheric ozone chemistry. Although this process may significantly contribute to the formation of reactive gas phase molecular halogens, little is known about the environmental factors that control how halides selectively accumulate at the air-water interface. In this study, the production of sea spray aerosol is simulated using electrospray ionization (ESI) of 100 nM equimolar solutions of NaCl, NaBr, NaI, NaNO(2), NaNO(3), NaClO(4), and NaIO(4). The microdroplets generated are analyzed by mass spectrometry to study the comparative enrichment of …

The Nuclear Infrared Emission Of Low-Luminosity Active Galactic Nuclei, R. E. Mason, E. Lopez-Rodriguez, C. Packham, A. Alonso-Herrero, N. A. Levenson, J. Radomski, C. Ramos Almeida, L. Colina, Moshe Elitzur, I. Aretxaga, P. F. Roche, N. Oi

Physics and Astronomy Faculty Publications

We present high-resolution mid-infrared (MIR) imaging, nuclear spectral energy distributions (SEDs), and archival Spitzer spectra for 22 low-luminosity active galactic nuclei (LLAGNs; L_bol ≲ 10⁴² erg s^–1). Infrared (IR) observations may advance our understanding of the accretion flows in LLAGNs, the fate of the obscuring torus at low accretion rates, and, perhaps, the star formation histories of these objects. However, while comprehensively studied in higher-luminosity Seyferts and quasars, the nuclear IR properties of LLAGNs have not yet been well determined. We separate the present LLAGN sample into three categories depending on their Eddington ratio and radio …

Multi-Dimensional Modeling Of Charring Ablators, Haoyue Weng, Huaibao Zhang, Ovais U. Khan, Alexandre Martin

Mechanical Engineering Faculty Publications

Re-entry of a spacecraft occurs at the hypersonic regime where the flow field is extremely complex: high temperature gradients occurring in the shock-layer region ionize and dissociate the air. Even if a large portion of heat generated during this process is convected away in the surrounding air, a fraction of it is still transferred to the vehicle. Therefore, it is important to protect the vehicle with a suitable kind of shielding. Of the many techniques available today, use of ablative material is gaining popularity. The basic idea behind an ablating heat shield is that the energy incident on the spacecraft …

Families Or Unrelated: The Evolving Debate In Genetic Association Studies, David W. Fardo, Richard Charnigo, Michael P. Epstein

Biostatistics Faculty Publications

To help uncover the genetic determinants of complex disease, a scientist often designs an association study using either unrelated subjects or family members within pedigrees. But which of these two subject recruitment paradigms is preferable? This editorial addresses the debate over the relative merits of family- and population-based genetic association studies. We begin by briefly recounting the evolution of genetic epidemiology and the rich crossroads of statistics and genetics. We then detail the arguments for the two aforementioned paradigms in recent and current applications. Finally, we speculate on how the debate may progress with the emergence of next-generation sequencing technologies.

Improving Woody Biomass Estimation Efficiency Using Double Sampling, David L. Parrott, John M. Lhotka, Songlin Fei, B. Scott Shouse

Forestry and Natural Resources Faculty Publications

Although double sampling has been shown to be an effective method to estimate timber volume in forest inventories, only a limited body of research has tested the effectiveness of double sampling on forest biomass estimation. From forest biomass inventories collected over 9,683 ha using systematic point sampling, we examined how a double sampling scheme would have affected precision and efficiency in these biomass inventories. Our results indicated that double sample methods would have yielded biomass estimations with similar precision as systematic point sampling when the small sample was ≥ 20% of the large sample. When the small to large sample …

A Proposed Methodology For Performing Follow-Up Tests To Compare Pairs Of Treatment Levels In Functional Linear Models, Olga A. Vsevolozhskaya, Mark C. Greenwood, Dmitri B. Holodov

Olga A. Vsevolozhskaya

No abstract provided.