Plant Sciences Commons^™

Fungal Planet Description Sheets: 1112–1181, P. W. Crous, D. A. Cowan, G. Maggs-Kölling, N. Yilmaz, E. Larsson, C. Angelini, T. E. Brandrud, J. D. W. Dearnaley, B. Dima, F. Dovana, Et Al.

Aspen Bibliography

Novel species of fungi described in this study include those from various countries as follows: Australia, Austroboletus asper on soil, Cylindromonium alloxyli on leaves of Alloxylon pinnatum, Davidhawksworthia quintiniae on leaves of Quintinia sieberi, Exophiala prostantherae on leaves of Prostanthera sp., Lactifluus lactiglaucus on soil, Linteromyces quintiniae (incl. Linteromyces gen. nov.) on leaves of Quintinia sieberi, Lophotrichus medusoides from stem tissue of Citrus garrawayi, Mycena pulchra on soil, Neocalonectria tristaniopsidis (incl. Neocalonectria gen. nov.) and Xyladictyochaeta tristaniopsidis on leaves of Tristaniopsis collina, Parasarocladium tasmanniae on leaves of Tasmannia insipida, Phytophthora aquae-cooljarloo from pond water, Serendipita whamiae as …

Watering The Landscape: Make It Easier With Evapotranspiration (Et), Candace Schaible, Kelly Kopp, Helen Muntz

All Current Publications

The American lawn is our nation’s single largest irrigated “crop” (Lindsey, 2005). In Utah, roughly 65% of our drinking water is applied to residential and commercial landscapes (Center for Water Efficient Landscaping, 2020). Landscapes are typically overwatered, which is why residential and commercial landscape watering is estimated to be one of the largest sources of potential water conservation in the urban setting (Endter-Wada et al., 2008). Plant materials also provide many environmental benefits, such as erosion control, water filtration, and temperature reduction. Knowing how much water to apply to the landscape can be a challenge and is one reason many …

Aspen Soils Retain More Dissolved Organic Carbon Than Conifer Soils In A Sorption Experiment, Antra Boča, Astrid R. Jacobson, Helga Van Miegroet

Aspen Bibliography

The effect tree species have on soil organic carbon (SOC) has been hotly debated but, so far, few clear patterns have emerged. One example of a differing tree species effect on SOC are aspen forests in North America, which have been found to have more stable SOC than adjacent conifer forest stands. An important source for the formation of stable organo-mineral complexes in soil is dissolved organic carbon (DOC). DOC concentrations in mineral soil are often higher under the thick O-horizons of conifer forests than under aspen forests, but this does not correspond to more stable mineral SOC. This suggests …

Managing Suckers Around Fruit Trees, Samuel Johnson, Teryl Roper, Xin Dai

All Current Publications

Many types of fruit trees produce suckers around the base of the tree. Crown suckers arise in the area immediately surrounding the tree trunk (Photo 1), and root suckers can arise from roots further away from the trunk. Not only are suckers around trees unsightly, but they can also harbor insect pests like wooly apple aphid and provide points of entry for diseases like fire blight. If suckers are profuse, they interfere with in-row weed management and can absorb systemic herbicides such as glyphosate. Some rootstocks used for fruit trees such as M.7 for apples and Mazzard for cherries are …

Can Trees Get Cancer?, Michael Kuhns

All Current Publications

This factsheet describes various cancer-like growths that are commonly found on trees.

Tree Seedling Planting Guide, Gabrielle Harden, Michael R. Kuhns

All Current Publications

A seedling is a tree less than three feet in height. This fact sheet covers obtaining, planting, and caring for small seedling trees and other woody plants. These trees can be sold and planted as bare-root or containerized stock.

Simulated Fire Behavior And Fine-Scale Forest Structure Following Conifer Removal In Aspen-Conifer Forests In The Lake Tahoe Basin, Usa, Justin P. Ziegler, Chad M. Hoffman, Brandon M. Collins, Jonathan W. Long, Christa M. Dagley, William Mell

Aspen Bibliography

Quaking aspen is found in western forests of the United States and is currently at risk of loss due to conifer competition at within-stand scales. Wildfires in these forests are impactful owing to conifer infilling during prolonged fire suppression post-Euro-American settlement. Here, restoration cuttings seek to impact wildfire behavior and aspen growing conditions. In this study, we explored how actual and hypothetical cuttings with a range of conifer removal intensity altered surface fuel and overstory structure at stand and fine scales. We then simulated wildfires, examining fire behavior and effects on post-fire forest structures around aspen trees. We found that …

Drought- Conditioning Of Quaking Aspen (Populus Tremuloides Michx.) Seedlings During Nursery Production Modifies Seedling Anatomy And Physiology, Joshua L. Sloan, Owen T. Burney, Jeremiah R. Pinto

Aspen Bibliography

In the western US, quaking aspen (Populus tremuloides Michx.) regenerates primarily by root suckers after disturbances such as low to moderate severity fires. Planting aspen seedlings grown from seed may provide a mechanism to improve restoration success and genetic diversity on severely disturbed sites. However, few studies have examined the use of container-grown aspen seedlings for restoration purposes from both the outplanting and nursery production perspective. Thus, the purpose of this novel study was to examine how alterations in irrigation levels during nursery production across three seed sources would impact seedling performance attributes on harsh, dry outplanting sites. Irrigation …

Subseasonal Prediction For Bloom Dates Of Tart Cherries In Utah And Michigan, Usa: Merging Phenological Models With Cfsv2 Forecast, Parichart Promchote, Shih-Yu (Simon) Wang, Brent Black, Paul Johnson

Plants, Soils, and Climate Faculty Publications

Temperate fruit trees require chilling for rest completion, followed by sufficient heat accumulation for onset of growth and bloom. The application of phenological models to predict bloom dates has been widely used in orchard management. Examples of such application include selecting adapted cultivars less prone to early bloom, predicting needs for frost protection, and preventing damage from late spring freezes. This study merged the Utah (chill) and ASYMCUR (forcing) phenological models by combining chill units and heat units (measured in growing degree hours) to predict bloom dates of tart cherries (Prunus cerasus L.) in Utah and Michigan, the top …

Patterns For Populus Spp. Stand Biomass In Gradients Of Winter Temperature And Precipitation Of Eurasia, Vladimir Andreevich Usoltev, Baozhang Chen, Seyed Omid Reza Shobairi, Ivan Stepanovich Tsepordey, Viktor Petrovich Chasovskikh, Shoaib Ahmad Anees

Aspen Bibliography

Based on a generated database of 413 sample plots, with definitions of stand biomass of the genus Populus spp. in Eurasia, from France to Japan and southern China, statistically significant changes in the structure of forest stand biomass were found, with shifts in winter temperatures and average annual precipitation. When analyzing the reaction of the structure of the biomass of the genus Populus to temperature and precipitation in their transcontinental gradients, a clearly expressed positive relationship of all components of the biomass with the temperature in January is visible. Their relationship with precipitation is less clear; in warm climate zones, …

Sequenced-Based Paternity Analysis To Improve Breeding And Identify Self-Incompatibility Loci In Intermediate Wheatgrass (Thinopyrum Intermedium), Jared Crain, Steve Larson, Kevin Dorn, Traci Hagedorn, Lee Dehaan, Jesse Poland

Forage and Range Research Laboratory Publications

Key Message

Paternity assignment and genome-wide association analyses for fertility were applied to a Thinopyrum intermedium breeding program. A lack of progeny between combinations of parents was associated with loci near self-incompatibility genes.

Abstract

In outcrossing species such as intermediate wheatgrass (IWG, Thinopyrum intermedium), polycrossing is often used to generate novel recombinants through each cycle of selection, but it cannot track pollen-parent pedigrees and it is unknown how self-incompatibility (SI) genes may limit the number of unique crosses obtained. This study investigated the potential of using next-generation sequencing to assign paternity and identify putative SI loci in IWG. Using …

Design, Monitoring And Management Approaches For The Root-Zone In Microgravity, Scott B. Jones

Funded Research Records

No abstract provided.

Aspen Next Generation: Conversations From Southern Colorado And Northern New Mexico, Dan Binkley, Bill Romme

Aspen Bibliography

Aspen trees and forests are especially important in the Rocky Mountains. Aspens add beauty to landscapes, foster high diversity and productivity of understory plants, provide for the habitat needs of many species of animals, and moderate fire behavior. There is a perception that aspen trees and stands are not regenerating well in southern Colorado and northern New Mexico; cohorts of trees younger than a few decades are scarce, at least in some areas. The next generation of aspen in the southern Rockies will be influenced by land use decisions, including harvesting, fire policy and management, and browsing by livestock and …

Genomic Insights Into Speciation History And Local Adaptation Of An Alpine Aspen In The Qinghai–Tibet Plateau And Adjacent Highlands, Jia-Lang Li, Lin-Ling Zhong, Jing Wang, Tao Ma, Kang-Shan Mao, Lei Zhang

Aspen Bibliography

Natural selection serves as an important agent to drive and maintain interspecific divergence. Populus rotundifolia Griff. is an alpine aspen species that mainly occurs in the Qinghai–Tibet Plateau (QTP) and adjacent highlands, whereas its sister species, P. davidiana Dode, is distributed across southwest and central to northeast China in much lower altitude regions. In this study, we collected genome resequencing data of 53 P. rotundifolia and 42 P. davidiana individuals across their natural distribution regions. Our population genomic data suggest that the two species are well delimitated in the allopatric regions, but with hybrid zones in their adjacent region in …

Sabie Water Use, Andrew Kulmatiski

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Plant root distributions are thought to determine plant growth and coexistence, but are notoriously difficult to measure. This dataset describes the concentration of deuterium oxide in plant tissues in plots where deuterium oxide was injected to target depths.

Preparing And Improving Garden Soil, Katie Wagner, Melanie Stock, Larry A. Sagers

All Current Publications

A great garden starts with healthy soil. In Utah, there are unique considerations for creating and maintaining healthy soils. Native Utah soils are relatively low in organic matter. One of Utah’s most troublesome, pH-related deficiencies is iron chlorosis, a deficiency of plant-available iron. Soil salinity easily increases in Utah. This fact sheet addresses these challenges to help gardeners transform garden soils from brutal to beautiful!

Formate Dehydrogenase (Fdh1) Localizes To Both Mitochondria And Chloroplast To Play A Role In Host And Nonhost Disease Resistance, Seonghee Lee, Ramu S. Vemanna, Sunhee Oh, Clemencia M. Rojas, Youngjae Oh, Amita Kaundal, Taegun Kwon, Hee-Kyung Lee, Muthappa Senthil-Kumar, Kirankumar S. Mysore

Plants, Soils, and Climate Faculty Publications

Nonhost disease resistance is the most common type of plant defense mechanism against potential pathogens. In this study, the metabolic enzyme formate dehydrogenase (FDH1) was identified to be involved in nonhost disease resistance in Nicotiana benthamiana and Arabidopsis thaliana. In Arabidopsis, AtFDH1 was highly upregulated in response to both host and nonhost bacterial pathogens. Arabidopsis Atfdh1 mutants were compromised in nonhost resistance, basal resistance, and gene-for-gene resistance. The expression patterns of salicylic acid (SA) and jasmonic acid (JA) marker genes after pathogen infections in Atfdh1 mutant indicated that SA is most likely involved in the FDH1-mediated plant defense response to …

In Vitro Digestibility Of Mountain-Grown Irrigated Perennial Legume, Grass And Forb Forages Is Influenced By Elevated Non-Fibrous Carbohydrates And Plant Secondary Compounds, Yunhua Zhang, Jennifer W. Macadam, Juan J. Villalba, Xin Dai

Plants, Soils, and Climate Faculty Publications

BACKGROUND

Perennial legumes cultivated under irrigation in the Mountain West USA have non‐fibrous carbohydrate (NFC) concentrations exceeding 400 g kg−1, a level commonly found in concentrate‐based ruminant diets. Our objective was to determine the influence of NFC concentration and plant secondary compounds on in vitro rumen digestion of grass, legume and forb forages compared with digestion of their isolated neutral detergent fiber (NDF) fraction. Forages were composited from ungrazed paddocks of rotationally stocked, irrigated monoculture pastures between May and August 2016, frozen in the field, freeze‐dried, and ground.

RESULTS

The maximum rate (RMax) of gas production was greater for the …

Long-Term Soil Productivity Study: 25-Year Vegetation Response To Varying Degrees Of Disturbance In Aspen-Dominated Forest Spanning The Upper Lake States, Miranda T. Curzon, Brian J. Palik, Anthony W. D'Amato, Julia Schwager

Aspen Bibliography

Installations of the Long-Term Soil Productivity Study were established in northern Minnesota and Michigan at the Chippewa, Ottawa, and Huron-Manistee National Forests (NFs) in the early 1990s and have since provided a wealth of data for assessing the response of aspen-dominated forest ecosystems to varying levels of organic matter removal and soil compaction. An assessment of 25-year standing woody biomass indicates that neither whole-tree harvest nor whole-tree harvest combined with forest floor removal reduced forest productivity on silt-loam soils compared with conventional, stem-only harvest; however, moderate and heavy compaction did negatively impact aspen biomass and stem densities. In contrast, whole-tree …

Chromosomal Evolution And Apomixis In The Cruciferous Tribe Boechereae, Terezie Mandáková, Petra Hloušková, Michael D. Windham, Thomas Mitchell-Olds, Kaylynn Ashby, Bo Price, John Carman, Martin A. Lysak

Plants, Soils, and Climate Faculty Publications

The mustard family (Brassicaceae) comprises several dozen monophyletic clades usually ranked as tribes. The tribe Boechereae plays a prominent role in plant research due to the incidence of apomixis and its close relationship to Arabidopsis. This tribe, largely confined to western North America, harbors nine genera and c. 130 species, with >90% of species belonging to the genus Boechera. Hundreds of apomictic diploid and triploid Boechera hybrids have spurred interest in this genus, but the remaining Boechereae genomes remain virtually unstudied. Here we report on comparative genome structure of six genera (Borodinia, Cusickiella, Phoenicaulis, …

Genetic Mapping Of The Common And Dwarf Bunt Resistance Gene Bt12 Descending From The Wheat Landrace Pi119333, Almuth Elise Muellner, Babur Eshonkulov, Julia Hagenguth, Bernadette Pachler, Sebastian Michel, Maria Buerstmayr, David Hole, Hermann Buerstmayr

Plants, Soils, and Climate Faculty Publications

Common bunt (CB), caused by Tilletia caries and T. foetida, and dwarf bunt (DB), caused by T. controversa, are particularly destructive diseases of wheat grown under organic (low-input) production conditions and negatively affect both grain yield and quality. A total of 16 race specific bunt resistance genes have been proposed to date. Thereof, only Bt9 and Bt10 have been mapped so far. A mapping and two validation populations comprising 176 recombinant inbred lines were evaluated for CB and DB in artificially inoculated field trials. The mapping population was derived from the cross of the Bt12 carrier PI119333 and …

Pasture Management To Improve Dry Matter Intake, Marcus F. Rose, Earl Creech, Blair L. Waldron, S. Clay Isom, Michael Peel, Kara Thornton-Kurth, Jacob Hadfield, Kerry A. Rood

All Current Publications

Agricultural producers are constantly looking for ways to maximize returns while reducing input costs. On dairy operations, a move from confinement feeding to pasture grazing offers the potential to reduce costs associated with harvest and storage of feed. In such a transition, producers sometimes report a decline in milk production and growth of livestock—both of which can strongly correlate to dry matter intake. Fortunately, dry matter intake is something that can be influenced by management practices. In this publication, we discuss the pasture management practices to improve dry matter intake.

Considerations For Crop Rotation From Alfalfa To Corn, Earl Creech, Matt Yost, Grant Cardon, Corey Ransom, Jason Clark

All Current Publications

The importance of rotating out of a declining alfalfa stand is well established. As the alfalfa stand ages, forage yield and quality decline, while weed, insect, and disease pressures increase. Terminating the stand and growing one or more other crops for several (2–3) years allows a grower to press the reset button on a piece of ground. These years of growing another crop will result in more productive alfalfa when a new stand is planted again.

Dataset For "Attributes Of Phragmites Australis In Response To Climate Change Using A Common Garden Study", Stephen L. Young

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The response of plant species to environmental change, including climate, is based on phenotypic plasticity. Empirical research can help in understanding how invasive plants adapt to changing conditions for successful establishment. Our goal was to assess the effect of environment of origin and ecotypic variation on phenotypic response of native and invasive Phragmites australis using morphological and ecophysiological measurements. We established a common garden study using seeds collected from Southwest, Midwest, and Great Lakes regions that crossed longitudinal and latitudinal gradients of the US. Within and end of growing season measurements were made for morphological (e.g., height, leaf size, inflorescence) …

From Physics To Fixtures To Food: Current And Potential Led Efficacy, Paul Kusuma, P. Morgan Pattison, Bruce Bugbee

Plants, Soils, and Climate Faculty Publications

Light-emitting diodes (LEDs) have enabled a historic increase in the conversion of electric energy to photons, but this is approaching a physical limit. The theoretical maximum efficiency occurs when all input energy is converted to energy in photosynthetic photons. Blue LEDs can be 93% efficient, phosphor-converted “whites” 76% efficient, and red LEDs 81% efficient. These improvements open new opportunities for horticultural lighting. Here we review (1) fundamental physics and efficiency of LEDs, (2) the current efficacy of LEDs, (3) the effect of spectral quality on crop yield, and (4) the potential efficacy of horticultural fixtures. Advances in the conversion of …

Using Degree Days To Time Treatments For Insect Pests, Marion Murray

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Insecticides that are applied for a perennial insect pest based on a calendar date often result in poor insect control and a waste of resources. Insect activity varies from year to year depending on weather. For example, in Logan, Utah, eggs of the apple pest codling moth began hatching on May 15 in 2005, May 5 in 2006, and April 30 in 2007.

Adaptability Of Tree Species As Windbreaks For Urban Farms In The U.S. Intermountain West, Sheriden M. Hansen, Jaydee Gunnell, Anthony Whaley, Xin Dai, Cole Harding, Brent L. Black

Extension Research

Windbreaks or shelterbelts are a management tool to protect crops from damaging horizontal wind flow, and may provide a useful buffer between farmland and urbanized areas by reducing pesticide drift, dust, and noise associated with farming activities. Plant selection for windbreaks in the Intermountain West can be difficult as high elevation coupled with extreme temperatures, high pH soils, and limited access to water are common. This study assessed eight tree species for suitability as a windbreak in the Intermountain West, with a particular focus on initial establishment and use at the urban–agriculture interface. Species were assessed for mortality, size, canopy …

Genetic Parameters Of Growth And Adaptive Traits In Aspen (Populus Tremuloides): Implications For Tree Breeding In A Warming World, Chen Ding, Andreas Hamann, Rong-Cai Yang, Jean S. Brouard

Aspen Bibliography

Aspen (Populus tremuloides Michx) is a widespread commercial forest tree of high economic importance in western Canada and has been subject to tree improvement efforts over the past two decades. Such improvement programs rely on accurate estimates of the genetic gain in growth traits and correlated response in adaptive traits that are important for forest health. Here, we estimated genetic parameters in 10 progeny trials containing >30,000 trees with pedigree structures based on a partial factorial mating design that includes 60 half-sibs, 100 full-sib families and 1,400 clonally replicated genotypes. Estimated narrow-sense and broad-sense heritabilities were low for height …

On Tanzania’S Precipitation Climatology, Variability, And Future Projection, Krishna Borhara, Binod Pokharel, Brennan L. Bean, Liping Deng, Shih-Yu (Simon) Wang

Plants, Soils, and Climate Faculty Publications

We investigate historical and projected precipitation in Tanzania using observational and climate model data. Precipitation in Tanzania is highly variable in both space and time due to topographical variations, coastal influences, and the presence of lakes. Annual and seasonal precipitation trend analyses from 1961 to 2016 show maximum rainfall decline in Tanzania during the long rainy season in the fall (March–May), and an increasing precipitation trend in northwestern Tanzania during the short rainy season in the spring (September–November). Empirical orthogonal function (EOF) analysis applied to Tanzania’s precipitation patterns shows a stronger correlation with warmer temperatures in the western Indian Ocean …

Short-Term Nitrogen Fertilization Affects Microbial Community Composition And Nitrogen Mineralization Function In An Agricultural Soil, Yang Ouyang, Jeanette M. Norton

Plants, Soils, and Climate Faculty Publications

Soil extracellular enzymes play a significant role in the N mineralization process. However, few studies have documented the linkage between enzyme activity and the microbial community that performs the function. This study examined the effects of inorganic and organic N fertilization on soil microbial communities and their N mineralization functions over 4 years. Soils were collected from silage corn field plots with four contrasting N treatments: control (no additional N), ammonium sulfate (AS; 100 and 200 kg of N ha⁻¹), and compost (200 kg of N ha⁻¹). Illumina amplicon sequencing was used to comprehensively assess the …