Physiology Commons^™

An Efficient Method For Generating Conditional Cell Lines For Cellular And Molecular Research, Mark Roth, Dr. Jonathan Alder

Journal of Undergraduate Research

Conditional cell lines are widely used throughout biochemical research. The basic concept is that you can delete a gene you are studying upon the addition of a drug, to cells in culture, and then use the knockout cells to study the genes effects. This process has been facilitated by the advent of the CRISPR/Cas9 system that allows a broad range of genome editing in living cells. Cas9 introduces a double strand break in DNA at a site specified by the CRISPR (guide RNA), and by changing the CRISPR sequence researchers can introduce these double strand breaks almost wherever they want. …

Glutathione-Mediated Oxidative Response In Uvb-Irradiated Hacat Cells, Patrick Badger, Dr. Jason Hansen

Journal of Undergraduate Research

Ultraviolet light (UV) plays a critical role in the etiology of skin cancer, contributing to over 95% of both melanoma and non-melanoma diagnoses. It consists of several wavelengths, among which UVB is the most harmful, causing inflammation associated with sunburn and constituting the principal cause of skin cancer-related death.

B-Hydroxybutyrate Favorably Alters Muscle Cell Survival And Mitochondrial Bioenergetics, Brian Parker, Benjamin Bikman

Journal of Undergraduate Research

The growing worldwide incidence of obesity and its associated pathologies, like type 2 diabetes, has received much deserved attention. However, despite this attention and substantial research efforts, little meaningful progress has been made in slowing or reversing the growing cost and trends of obesity worldwide. As of 2008, almost 10% of medical costs in the United States were incurred due to obesity or other obesity-related diseases,ⁱ with the substantial amount of this cost stemming from the dramatically increased risk of diabetes with excess fat mass.ⁱⁱ According to the US Centers for Disease Control and Prevention, more than one …

Maternal-Fetal Interactions And The Induction Of Preeclampsia By Growth Arrest-Specific 6 (Gas6)/Axl Signaling, Todd Dunaway, Paul Reynolds

Journal of Undergraduate Research

Preeclampsia (PE) is a complicated obstetric complication characterized by increased blood pressure and decreased trophoblast invasion. PE is one of the leading causes of maternal and fetal morbidity and mortality in developed countries. The growth arrest-specific 6 (Gas6) protein is known to induce different responses in cells including prevention of apoptosis and enhanced cell migration and invasion. This protein is secreted in response to growth arrest and it is increased in the serum of PE patients. This discovery suggests a mechanistic role for the Gas6 signaling pathway during PE progression. Gas6 binds to the AXL tyrosine kinase receptor and AXL-mediated …

Elucidating The Role Of The Transcriptional Co-Activator Camta1 In Cardiac Development, Nate Batey, Zach Frederich, Morgan Fronk, Nate Jenkins, Jonathon Hill

Journal of Undergraduate Research

Congenital Heart Disease (CHD) is the most common type of birth defect in the United States, causing more first-year infant deaths than any other birth defect (1). While the causes of CHD are varied, genetic defects are known to play a significant role. Identifying and studying genes involved in embryonic heart development can enhance understanding of the genetic factors in CHDs. The camta1 gene is a promising candidate due to its transient expression in heart morphogenesis and its relationship to camta2 , the only other member of its family in vertebrates and a known player in adult heart failure (2,3).

“Seeing” Beyond The Knees: Inflammation In The Eye As A Result Of Mechanical Stress, Michael Goodman, David Kooyman

Journal of Undergraduate Research

A correlation between Osteoarthritis (OA), affecting over 27 million people in the US [1], and metabolic syndrome (MS), affecting over 340 million people worldwide [2], becomes strikingly important as the search for an effective treatment for OA continues. Increasing evidence has shown that OA is linked to systemic inflammation and MS. With MS comes other substantial comorbidities, including diabetic retinopathy (DR). Ocular inflammation promoted through mechanically induced OA would provide evidence that mechanical stress can be a factor leading to systemic inflammation. Such results would have profound impacts upon the way we view OA as a metabolic disorder, leading to …

Rage Functions During Secondhand Smoke-Induced Bronchopulmonary Dysplasia, Brent Kimber, Dr. Paul Reynolds

Journal of Undergraduate Research

Bronchopulmonary Dysplasia (BPD) is a common respiratory disease among pre-term infants or newborns exposed to harmful toxins during pregnancy or at birth. This leads to several respiratory diseases later in life such as chronic obstructive pulmonary disorder (COPD) or asthma. However, research on the effects of cigarette smoke in utero has many gaps. This project focuses on developing a transgenic mouse model that mimics the pulmonary morphologies and characteristics of BPD. This model will then be used for further research and potentially discover new therapeutic methods for BPD. The transgenic mouse was established using a modified genetic scheme whereby the …

Trf1 Mutations As A Mechanism For Telomere Length Maintenance In Cancer, Collin Sanderson, Jonathan Alder

Journal of Undergraduate Research

Telomeres are repetitive DNA sequences found on the ends of chromosomes that serve to protect the genes contained within each chromosome. As a cell replicates, its telomeres shorten, eventually triggering cellular senescence or death. This serves as a tumor suppressive mechanism by limiting the proliferation of cells. All cancers must overcome this growth limitation by acquiring mutations that permit telomere elongation. Most cancers achieve this by acquiring activating-mutations in an enzyme known as telomerase. Some cancers do not express telomerase, and maintain their telomeres by other means including a mechanism called “alternative lengthening of telomeres” (ALT). However, there exists a …

Examining The Potential Role Of Gpr18 And Gpr119 In Learning And Memory, Brandon Anderson, James Kranewitter-Call, Dr. Jeffrey Edwards

Journal of Undergraduate Research

Many mental disorders plague our society. Dementia and Alzheimer’s disease have greatly impacted many victims and their families. Despite the seriousness and pervasiveness of Alzheimer’s, there is still no effective treatment for it nor the accompanying dementia. GPR18 and GPR119 are G-protein coupled receptors (GPRs) and have been identified in the central nervous system, but their functional role is unknown. Many successful drugs target GPR proteins, so examining these GPRs’ function in the brain could lead to potential targets leading to innovative medical advances.

Memory is dependent on a molecular process called synaptic plasticity. In synaptic plasticity, the strength of …

Forward Genetic Screen To Identify Novel Genes Involved In Nhej Dna Repair, Taylor Brown, Dr. Jonathan Alder

Journal of Undergraduate Research

DNA contains all the information a cell needs to grow, divide, differentiate, and survive. It also dictates how and when a cell should die. DNA damage (particularly double strand breaks i.e. DSBs) may lead to cell death and/or disease. To circumvent DNA breaks, cells use various DNA repair mechanisms including non-homologous end joining (NHEJ). My ORCA research project focused on identifying novel genes involved in NHEJ. I did this by performing a forward genetic screen (FGS) that tested every known gene in the genome for involvement in NHEJ.