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Full-Text Articles in Microbiology

Evidence For The Priming Effect In Single Strain And Simplified Communities Of Estuarine Bacteria, Abigail Amina Edwards May 2017

Evidence For The Priming Effect In Single Strain And Simplified Communities Of Estuarine Bacteria, Abigail Amina Edwards

Chancellor’s Honors Program Projects

No abstract provided.


Aerobic Bacterial Transformations Of Lignin-Derived Aromatic Compounds, Ashley Marie Frank May 2016

Aerobic Bacterial Transformations Of Lignin-Derived Aromatic Compounds, Ashley Marie Frank

Doctoral Dissertations

Lignin, the most abundant aromatic polymer on earth, has been estimated to contribute ~20% of the total carbon deposited in nature and thus imparts a large influence on carbon cycling in the environment. The extraordinary abundance of carbon stored in this material renders it a desirable source of renewable carbon for a variety of applications including hydrocarbon fuels and industrial chemicals. Due to its incredibly stable architecture and entanglement with cell wall polysaccharides, however, efforts toward the conversion of lignin to high value commodities have historically been impeded. Despite this obstacle, many microbes in nature are capable of degrading lignin …


Acyl-Homoserine Lactone-Based Quorum Sensing In The Roseobacter Clade: Complex Cell-To-Cell Communication Controls Multiple Physiologies, W Nathan Cude, Alison Buchan Nov 2013

Acyl-Homoserine Lactone-Based Quorum Sensing In The Roseobacter Clade: Complex Cell-To-Cell Communication Controls Multiple Physiologies, W Nathan Cude, Alison Buchan

Microbiology Publications and Other Works

Bacteria have been widely reported to use quorum sensing (QS) systems, which employ small diffusible metabolites to coordinate gene expression in a population density dependent manner. In Proteobacteria, the most commonly described QS signaling molecules are N-acyl-homoserine lactones (AHLs). Recent studies suggest that members of the abundant marine Roseobacter lineage possess AHL-based QS systems and are environmentally relevant models for relating QS to ecological success. As reviewed here, these studies suggest that the roles of QS in roseobacters are varied and complex. An analysis of the 43 publically available Roseobacter genomes shows conservation of QS protein sequences and overall …


Genetic And Ecological Characterization Of Indigoidine Production By Phaeobacter Sp. Strain Y4i, William Nathan Cude Aug 2013

Genetic And Ecological Characterization Of Indigoidine Production By Phaeobacter Sp. Strain Y4i, William Nathan Cude

Doctoral Dissertations

The Roseobacter clade is a widely distributed, abundant, and biogeochemically active lineage of marine alpha-proteobacteria. Members of the Roseobacter lineage are prolific surface colonizers in marine coastal environments, and antimicrobial secondary metabolite production has been hypothesized to provide a competitive advantage in colonization. In this work, Phaeobacter sp. strain Y4I was found to produce the water soluble, blue pigment indigoidine via a nonribosomal peptide synthase-based biosynthetic pathway encoded by a novel series of genetically linked genes, termed igiBCDFE. Comparison of wildtype, non-pigmented, and hyper-pigmented Y4I insertional mutants demonstrated a perfect correlation between indigoidine production and the inhibition of Vibrio …