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Full-Text Articles in Marine Biology

A Comparative Genomics Exploration Of Inter-Partner Metabolic Signaling In The Coral-Algal Symbiosis, Katherine E. Dougan Dec 2020

A Comparative Genomics Exploration Of Inter-Partner Metabolic Signaling In The Coral-Algal Symbiosis, Katherine E. Dougan

FIU Electronic Theses and Dissertations

At the foundation of coral reef ecosystems is the symbiosis between the coral host and its microbial community, particularly its photoautotrophic algae from the family Symbiodiniaceae. As a symbiosis centered around nutritional exchange, determining the mechanisms involved in the maintenance of this cooperative exchange is central to understanding how it breaks down. As the nutritional transfer primarily consists of sugars, this work first focuses on the cnidarian insulin signaling pathway, an evolutionarily important metazoan pathway involved in diverse functions, most notably metabolism. This dissertation unveiled 360 putative cnidarian insulin-like peptides (cnILPs) from existing transcriptomic datasets, where they were previously missed …


Connections In The Underworld: A Morphological And Molecular Study Of Diversity And Connectivity Among Anchialine Shrimp., Robert Eugene Ditter Nov 2020

Connections In The Underworld: A Morphological And Molecular Study Of Diversity And Connectivity Among Anchialine Shrimp., Robert Eugene Ditter

FIU Electronic Theses and Dissertations

This research investigates the distribution and population structure of crustaceans, endemic to anchialine systems in the tropical western Atlantic focusing on cave-dwelling shrimp from the family Barbouriidae. Taxonomic and molecular tools (genetic and genomic) are utilized to examine population dynamics and the presence of phenotypic hypervariation (PhyV) of the critically endangered species Barbouria cubensis (von Martens, 1872). The presence of PhyV and its geographic distribution is investigated among anchialine populations of B. cubensis from 34 sites on Abaco, Eleuthera, and San Salvador, Bahamas. Examination of 54 informative morphological characters revealed PhyV present in nearly 90% (n=463) of specimens with no …


Exploration Of The Role Of Microbiome Structure, Metabolism, And Modification In Black Band Disease Etiology, Patricia Waikel Sep 2020

Exploration Of The Role Of Microbiome Structure, Metabolism, And Modification In Black Band Disease Etiology, Patricia Waikel

FIU Electronic Theses and Dissertations

The coral microbiome plays an integral role in coral health. Modification of the microbiome is thought to alter susceptibility to disease. Black Band Disease (BBD), is polymicrobial, mat forming, and affects reef building coral globally. Dominated by the cyanobacterium Roseofilum reptotaenium, it has been noted to increase in virulence with increasing temperatures, making BBD of particular concern in the face of climate change-induced warming seas. The active sulfur cycle of BBD makes dimethylsulfoniopropionate (DMSP), a widely available source of sulfur in the marine environment, of particular interest in the study of BBD. Traditional infection studies require field collection and …


Structure, Control, And Communication Of Collective Animal Behavior In Dynamic Environments, Ivan Ignacio Rodriguez-Pinto Jun 2020

Structure, Control, And Communication Of Collective Animal Behavior In Dynamic Environments, Ivan Ignacio Rodriguez-Pinto

FIU Electronic Theses and Dissertations

Collective behavior in animal aggregations is highly complex and spans multiple spatial scales, across a wide range of environmental conditions. In socially active fish, aggregation into schools is a widespread adaptation that confers a variety of safety benefits. The emergent patterns exhibited by collectively behaving fish schools may be influenced by biotic (i.e. predation) or abiotic (i.e. habitat complexity, turbidity) factors in the local environment. Our knowledge of the ways and extent to which environment variability affects schooling behavior at the collective level is currently limited. In this dissertation, I investigated whether environmental factors influenced the collective behavior of fish …


Beyond Predation: How Do Consumers Mediate Bottom-Up Processes In Ecosystems?, Bradley Austin Strickland Jun 2020

Beyond Predation: How Do Consumers Mediate Bottom-Up Processes In Ecosystems?, Bradley Austin Strickland

FIU Electronic Theses and Dissertations

By eating and scaring prey, predators can exert strong effects on communities and ecosystems. In addition, some animals may physically alter habitats and may recycle nutrients through digestion, both of which affect resources available to producers. Bottom-up effects initiated by large predators have not been well-studied and could prove to be important for understanding food webs and how ecosystems function. American alligators (Alligator mississippiensis) are abundant mobile predators that are capable of engineering aquatic habitats by moving organic material across ecosystem boundaries and creating and maintaining alligator ponds. In this dissertation, I documented the scale of ecological impacts …