Marine Biology Commons^™

Habitat Utilization Of Marsh And Adjacent Submerged Landscape By Fish And Macroinvertebrates In A Gulf Of Mexico Tidal Oligohaline Environment, Tia Offner

Theses and Dissertations

Estuarine habitats are considered nursery habitats for fishes and invertebrates, but oligohaline environments are critically understudied. Using a seine net and fyke nets, we sampled Back Bay, Mississippi (USA), a low salinity estuary, once a month for a year to explore the temporal use of the marsh and adjacent submerged landscape by nekton species. We also looked at whether there is evidence of habitat preference in the most numerous nekton species. We used a novel habitat usage index (HUI) to compare seine and fyke net catches of our top 10 species, and evaluated catch size in relation to maturation size. …

Effects Of Short-Term Pesticides Exposure On Swimming Behavior, Tissue Morphology, Oxidative-Nitrative Stress, Antioxidant Expression, And Cellular Apoptosis In Kidneys Of Goldfish, Esmirna Cantú

Theses and Dissertations

The prevalence of pesticides in the aquatic environment continues to increase due to anthropogenic activities and poses a threat to aquatic organisms. The aim of this study was to determine the short-term exposure (one-week) of pesticide mixtures (metolachlor, linuron, isoproturon, tebucanazole, alconifen, atrazine, pendimethalin; azinphos-methyl) on swimming behaviors, kidney morphology, and expression of nitrotyrosine protein (NTP), dinitrophenyl protein (DNP), superoxide dismutase (SOD), catalase (CAT), renin, and cellular apoptosis in goldfish (Carassius auratus). Results indicated that both low- and high-dose pesticide mixtures decreased the distance swimming behavior. Histological analysis showed pesticide exposure alters kidney morphology. DNP, NTP, and renin expressions, and …

The Relationship Between Biofouling Adhesion And Frequency Of Mechanical Cleaning To Control The Recruitment To Clear Coatings, Dylan Thomas Eggers

Theses and Dissertations

There is a need to control biofouling on sensors and transparent windows in the marine environment. Clear silicone coatings offer a method to reduce the adhesion strength of marine organisms to the surface, however, these also require mechanical cleaning to maintain the surfaces free of fouling. This research evaluated the performance of eighty seven formulations and took the top two candidates to investigate a) the frequencies of wiping required by a brush to maintain two coatings and uncoated glass surfaces free of fouling and b) the effects of clear silicone coatings fouling release properties on required frequencies. The panels were …

Evaluation Of Monthly And Seasonal Grazing Rates Of Ilyanassa Obsoleta On Benthic Microalgae In The North Inlet Estuary, Brittany Dearmitt

Theses and Dissertations

The eastern mud snail, Ilyanassa obsoleta, is found at densities of 100’s of individuals m^-2 on soft sediments in the intertidal zones of estuaries. These obligate deposit feeders consume microalgae, detritus, larvae, meiofauna, and macrofauna in the surface layers of sediments with possible trophic impacts on benthic microalgal (BMA) biomass. The goals of this study were to quantify mud snail grazing on BMA biomass, observe the variation in monthly and seasonal grazing rates, and evaluate the relationship between atmospheric temperatures and grazing rates. The sites for this experiment were two mudflats in Oyster Landing, North Inlet estuary, South …

Effects Of Tributyltin Exposure On 8-Ohdg And Dsdna Expressions, Oxidative And Nitrative Stress In The American Oyster, Crassostrea Virginica, Mohan Kumar Dash

Theses and Dissertations

Environmental pollution increases due to anthropogenic activities. Different types of pollutants and/or chemicals impair growth, reproduction and development in aquatic organisms. Tributyltin (TBT, an organotin compound) is a tremendously toxic substance which widely uses as antifouling paints used in boats, hulls, and ships. The toxic effect of TBT is well documented in teleost species. The American oyster (Crassostrea virginica) is an ideal shellfish species to study on TBT exposure DNA lesion and oxidative/nitrative stress. In this study, the effects of TBT on 8’-hyrodxy-2’-deoxyguanosine (8-OHdG, a molecular marker), dsDNA, dinitrophenyl protein …

The Form And Function Of Cranial Spines In Fishes, Louis Michael Penrod

Theses and Dissertations

Despite the prevalence of fishes that express cranial spines, quantitative investigations into the function of these spines are rare. Function is often assumed with little or no evidence. Commonly, spine-like structures are considered to be used for defense despite spines potentially being used for other purposes. Here, I took a high-level approach to investigate the morphology and potential functions of cranial spines in over 2000 fishes. Identifying the function of cranial spines in fishes not only informs us as to how these fishes interact with conspecifics, with other species, and with their environment, but also may provide advances in human …

It Takes A Muscle: Wholes, Holes, And Other Voids, Saar Shemesh

Theses and Dissertations

IT TAKES A MUSCLE¹

In the BELLY of the BEAST, the HUMAN

in the deep end of a SWIMMING POOL

in a GRAVE, looking up/out from within

at the base of a CRATER, ABYSS, PIT

the room as a CRADLE, INCUBATOR

architecture as MOTHER MOULD.²

____________________________

¹ Title is borrowed and abbreviated: Spectral Display, “It Takes A Muscle To Fall In Love,” 1982.

² For what American-English delineates as ‘mold,’ British-English uses ‘mould’ and is more specific in its technicality. The former doesn’t distinguish in spelling between mold (fungus) and mold (mould). I’m not particularly a fan of …

Variations In Otolith-Zinc Concentrations Of Brown Surgeonfish (Acanthurus Nigrofuscus) Between Marine Protected Areas And Fished Reefs, Matthew Austin Nichols

Theses and Dissertations

As human populations continue to increase, the growing reliance on exploited fish stocks has furthered patterns of declining body size and biomass worldwide. To mitigate these impacts, fisheries managers have implemented a variety of conservation strategies, including marine protected areas (MPA), as these serve as a refuge for fish, resulting in increases in numerous health metrics (fish density, biomass, body-size, and species diversity). By using fish otolith samples previously concluded to have physiological and morphometric differences between MPA and fished reef (FR) fish, this thesis explores the potential of using microchemical analysis of zinc (Zn) to reveal impacts MPAs might …

Sensitivity Of Aquatic Organic Matter Degradation To Changing Temperature And Nutrient Conditions In A Coastal Watershed, Curtis John Szewczyk

Theses and Dissertations

The degradation of organic matter (OM) within inland waters plays a pivotal role in the global carbon cycle and quantifying carbon budgets. Here, measurements of dissolved oxygen (DO) decay rates were used to infer the extent and kinetics of OM degradation under variable conditions. The goal of the investigation was to quantify how OM samples within the Waccamaw River watershed, South Carolina, respond to changes in temperature and nutrient availability as a function of their source location and lability. Samples were collected from urbanized stormwater detention ponds and undeveloped upland forested wetland drainages to provide contrasting and distinct OM sources …

Spatial And Temporal Variability In Carbon And Nutrient Concentrations Within The North Inlet Estuary,Sc, Heather Kish

Theses and Dissertations

Coastal wetlands provide numerous ecosystem services, including the ability to sequester and store significant amounts of organic carbon (so-called “blue carbon”). Variability in carbon storage within marshes represents a major information gap in understanding and quantifying the role saltmarshes play in the global carbon cycle. This study quantified decadal and small-scale variability in carbon and nutrient concentrations across tidal inundation gradients in the relatively pristine North Inlet Estuary, South Carolina. Sampling took place within two segments of the marsh platform of Crab Haul Creek, the landward-most basin within North Inlet. In the summer of 2020, a total of 200 sediment …

Characterizations Of Dissolved Organic Carbon At Hydrothermal Systems Of The Midcayman Rise, Aaron Mau

Theses and Dissertations

Marine dissolved organic carbon (DOC) is a carbon reservoir comparable in size to all atmospheric CO2 and is composed primarily of refractory material which can be thousands of years old. Circulation through hydrothermal systems has been demonstrated to profoundly alter this material, but the mechanisms that lead to addition, removal, and alteration of DOC are poorly understood. Consequently, the contribution of hydrothermal systems to organic carbon cycling in the deep ocean – and the biological and geochemical processes exhibited at different venting environments – remain highly uncertain.

In January 2020, samples were collected from two hydrothermal vent fields at the …

Insights Into Halophilic Microbial Adaptation: Analysis Of Integrons And Associated Genomic Structures And Characterization Of A Nitrilase In Hypersaline Environments, Sarah Sonbol

Theses and Dissertations

Hypersaline environments are extreme habitats that can be exploited as biotechnological resources. Here, we characterized a nitrilase (NitraS-ATII) isolated from Atlantis II Deep brine pool. It showed higher thermal stability and heavy metal tolerance compared to a closely related nitrilase.

We also studied integrons in halophiles and hypersaline environments. Integrons are genetic platforms in which an integron integrase (IntI) mediates the excision and integration of gene cassettes at specific recombination sites. In order to search for integrons in halophiles and hypersaline metagenomes, we used a PCR-based approach, in addition to different bioinformatics tools, mainly IntegronFinder.

We found that integrons and …

Caribbean Yellowtail Snapper Ocyurus Chrysurus: Filling In Critical Gaps In Research For Life History And Novel Ageing Validation Utilizing Δ14C, Sarah Zajovits

Theses and Dissertations

Yellowtail snapper Ocyurus chrysurus is an important fisheries species in the US Caribbean; in waters of Puerto Rico, it ranks second for reef fishes in terms of annual total commercial landings. However, a paucity of information exists concerning basic life history information for Caribbean yellowtail snapper populations. This study provides the first comprehensive documentation of age, growth, and reproductive biology of yellowtail snapper from the Caribbean and is the first to directly validate age estimation in this species. Sampling of 1731 yellowtail snapper occurred in Puerto Rico and the U.S. Virgin Islands during 2013-2021 from fisheries-dependent and –independent efforts. Fish …

Dissolved Nitrogen Cycling In The Eastern Canadian Arctic Archipelago From Stable Isotopic Data, Holly Westbrook

Theses and Dissertations

Climate change is expected to drastically alter the input of inorganic nitrogen (N) sources in the Eastern Canadian Arctic Archipelago (ECAA) with increasing discharge from glacial meltwater and permafrost thawing. Since dissolved inorganic N is generally depleted in surface waters, dissolved organic N (DON) could represent a significant source of nutrients limiting primary production in Arctic ecosystems. Yet, few DON data for this region exist. We analyzed stable isotopes (δ¹⁵N and δ ¹⁸O of DON and NO₃-) to investigate dissolved nitrogen cycling in glacial rivers and marine surface samples collected in the ECAA during summer …

The Potential Of Indian River Lagoon Muck To Act As A Reservoir For Emerging Organic Contaminants, Gregory David Belson

Theses and Dissertations

Pharmaceuticals, pesticides, and personal care products are frequently found in sediments and waterways around the world. These chemicals, collectively known as Emerging Organic Contaminants (EOCs) can harm the environments in which they are deposited by killing or stressing the local flora and fauna. These EOCs also can be released back into the water column when these substrates are disturbed. Such sediments and their associated EOCs are particularly problematic in urbanized areas. However, the particular composition of urbanization-associated sediments as well as their potential to harbor EOCs needs to be evaluated in the context of their environment, to ensure proper mitigation …

An Assessment On Microplastic Pollution In The Resacas Of The Lower Rio Grande Valley, Texas, Wesley D. Franklin

Theses and Dissertations

Microplastic pollution is a serious issue that impacts most aquatic environments. Microplastics have the potential to cause numerous detriments to the fitness and reproductive capability of many organisms. The resacas of the Lower Rio Grande are an understudied area that could be sinks for large congregations of microplastics. We analyze microplastic pollution in two species of fish as well as the sediment and water of eleven different pools from four resaca systems. We find that microplastics are present in every pool sampled.

Altogether 218 microplastic pieces are found from the water, sediment and fish samples. We find that microplastics are …

Geographic Variability In The Reproductive Hormones And Oocyte Maturation Of Bonefish (Albula Vulpes) In The Bahamas, Ashley Yarbrough

Theses and Dissertations

Bonefish (Albula vulpes) are an extremely popular sport fish that are a vital component of the multimillion-dollar recreational flats fishery. Despite its economic importance for many countries, there is little information available about many aspects of their reproductive biology. Significant gaps include analysis of the hormones that influence oocyte development and the nutrient levels in oocytes that drive embryonic and early larval development and how these parameters vary among habitats. The goals of this study were to characterize and quantify the reproductive hormones, oocyte developmental stages, and nutrient composition of oocytes from fish at or near spawning sites across multiple …

Zooplankton Community Structure And Grazing Within A Stormwater Detention Pond In Coastal South Carolina, Kristen Laccetti

Theses and Dissertations

Stormwater detention ponds (SDPs) on the coast of South Carolina have become increasingly prevalent as the area experiences rapid urbanization. SDPs are man-made reservoirs implemented to minimize pollution inputs into receiving waters and are home to diverse biota, including zooplankton. Zooplankton are a good water quality indicator due to their quick response times and trophic regulators of phytoplankton through grazing. Zooplankton and phytoplankton interactions in stormwater detention ponds are an essential component for understanding plankton community dynamics in SDPs. This purpose of this study was to determine the seasonal variability in zooplankton community composition and grazing rates at 14-day intervals …

Fortnightly Effects Of Urea Additions On Cyanobacteria In A Stormwater Detention Pond, Halley Carruthers

Theses and Dissertations

Increased urban and suburban population growth along the South Carolina (SC) coast has led to a rise in impervious surfaces, altering the course of stormwater runoff events. The construction of stormwater detention ponds (SDPs) is one of the many ways to best mitigate the flow of this water. In their function as natural pollutant traps, SDPs often contain increased levels of nutrients (nitrogen, N and phosphorus, P), which can lead to eutrophication. Under these high eutrophic conditions, primary production is overstimulated, and the formation of phytoplankton blooms, including harmful algal blooms (HABs) can occur. In recent decades, the forms of …

Interactive Effects Of Heat Stress And Pesticides Co-Exposure On Swimming Behavior, Oxidative Stress, Antioxidant Expression, And Redox Status In Common Goldfish (Carassius Auratus), Brittney Danielle Lacy

Theses and Dissertations

Aquatic ecosystems are inundated by environmental pesticides. This study, observed the dose-dependent effects of pesticides cocktail (metalachlor, linuron, isoproturon, tebucanazole, aclonifen, atrazine, pendimethalin, and azinphos-methyl) and elevated temperature (32 °C for 4-week exposure) on morphology of gills and kidneys, and expression of nitrotyrosine protein (NTP), dinitrophenyl protein (DNP), catalase (CAT), superoxidase dismutase (SOD), Na+/K+-ATPase, renin, and apoptosis in tissues of goldfish. Additionally, the effects on the free-swimming behavior were also observed. Histological analysis showed wide-spread damage in tissues at higher temperature and pesticides co-exposure. Immunohistochemical analysis demonstrated alterations in NTP, DNP, CAT and SOD expressions in tissues at higher temperature …

Ocean-Atmosphere Interactions During Intraseasonal Oscillations In The Northern Indian Ocean, Heather Leigh Roman-Stork

Theses and Dissertations

The Indian Ocean and the monsoon system are dynamically complex. In the Bay of Bengal (BoB) and southeastern Arabian Sea (SEAS), surface circulation is strongly influenced by the monsoons and notable local eddying that modulates the East India Coastal Current (EICC). In this study, the role of freshwater transported from the BoB into the SEAS in determining both the timing of monsoon onset and the strength of the ensuing monsoon is examined. It is found that the long-term decrease in moisture flux from the sea surface and freshwater transport into the SEAS, along with a rise in upper ocean heat …

Analysis Of The Facilitative Interaction Between Batis Maritima And Avicennia Germinans As A Mangrove Restoration Strategy, Javier R. Navarro

Theses and Dissertations

The multiple experiments conducted in an Avicennia germinans forest in Laguna Vista, TX was focused on determining if facilitation theory could explain the behavior observed between the herbaceous halophyte Batis maritima and A. germinans. I hypnotized that a positive interaction exists but through which mechanisms of facilitation I did not know. The overarching theme of the study is the presence or absence of B. maritima. Facilitation theory tells us that positive interactions are most often found under stressful conditions such as those on the coastal tidal flat of the Laguna Madre. Locally B. maritima has been found to …

Spatiotemporal Dynamics Of Benthic Microalgae In South Carolina Shelf Sediments, Sarah N. Zaunbrecher

Theses and Dissertations

Benthic microalgae (BMA) play essential roles in food webs and regulating nutrient exchange at the sediment-water interface in continental shelf ecosystems. However, shelf BMA are not widely studied due to the difficulties sampling the upper few millimeters of shelf sediments. A few published studies have highlighted the high spatiotemporal distribution of BMA, but detailed explanations for this known variability are limited. The objectives of this study were to quantify BMA biomass variability on scales of cm to km and relate these measurements to in situ nutrient concentrations, sediment grain size, in situ irradiance, depth, and other environmental factors. Water and …

Influence Of Stormwater Management On Oxygen Demand And Organic Matter Cycling In Urbanizing Headwater Catchments, Kelly Mccabe

Theses and Dissertations

Excessive organic matter (OM) is driving declining dissolved oxygen (DO) concentrations in coastal ecosystems, worldwide. The quantity, source, and composition of OM transported to coastal ecosystems via stormwater runoff has been altered by land use changes associated with urbanization and subsequent headwater alterations that accompany urban stormwater management. To understand the role of stormwater runoff in the decline of coastal DO, biochemical oxygen demand (BOD) was determined for samples collected during rain events from the outfalls of a variety of stormwater infrastructure with watersheds spanning a range of development. Measurements of particulate and dissolved carbon and nitrogen and chlorophyll-a concentrations …

Adjustment Of A Coastal Buoyant Outflow Under Tidal And Wind Forcing, A K M Nahid Hasan

Theses and Dissertations

The discharge of brackish water from estuaries typically forms distinct coastal plumes, often visible through their color signature due to sediment load and particulate matter from rivers. The processes of mixing and dispersion of coastal plumes are subjected to natural variations in the magnitude and timing of freshwater inflows, tides and meteorological conditions. This study presents shipboard observation of the bulge region of a buoyant plume off Winyah Bay, SC. The observation comprises downward looking 600 and 1200 kHz ADCP (Acoustic Doppler Current Profiler) and CTD measurements. Along with standard CTD casts, water samples were collected to analyze and determine …

New Approaches To Understanding Mjo Dynamics, Casey Shoup

Theses and Dissertations

The Madden-Julian Oscillation (MJO) is a highly air-sea coupled phenomenon and is the dominant mode of intraseasonal variability in the tropics. It is easily discernible in satellite-derived sea surface salinity (SSS), which varies as a direct result of MJO precipitation from the convectively active to suppressed phases. Negative (positive) SSS anomalies are associated with the active (suppressed) phase of the MJO. We find that all three available satellite salinity missions (ESA’s Soil Moisture Ocean Salinity (SMOS); NASA’s Aquarius/SAC-D, and NASA’s Soil Moisture Active Passive (SMAP)) are capable of capturing the MJO SSS signal and that the near-equatorial SSS response is …

Dynamics Of The Loop Current System And Its Effects On Surface And Subsurface Properties In The Gulf Of Mexico, Richard James Brokaw

Theses and Dissertations

Surface circulation in the Gulf of Mexico is dominated by the Loop Current System (LCS), including the Loop Current (LC) and its associated eddies. The Gulf of Mexico (GoM) also displays long-term surface gradients of temperature and salinity due to climatological features including the intrusion of warm, saline waters from the Caribbean Sea and the seasonal deposition of freshwater from the Mississippi River System caused by seasonal increases in snow melt and precipitation over the watershed. This research aims to increase the understanding of the LCS through the investigation of its relationship with these surface gradients. A classification system of …

Circulation Changes In The Arctic Ocean And Subarctic Seas And Their Connections To The Global Ocean And Climate, Rachel Elizabeth Nichols

Theses and Dissertations

Salinity and freshwater fluxes are important tools for monitoring the amount of freshwater entering and exiting the Arctic Ocean. Satellite-derived salinity provides a way to study surface advective freshwater fluxes; however, sea ice contamination, among others, remains an obstacle in the accuracy and reliability of these measurements. In this study, salinity and surface freshwater fluxes are calculated using NASA’s Soil Moisture Active Passive (SMAP) and the ESA’s Soil Moisture Ocean Salinity (SMOS), Argo, and the European Centre for Medium-Range Weather Forecast’s Ocean Reanalysis version 4 (ORAS4). ORAS4 compares well to Argo in the subarctic seas and is used for comparison …

The Whelming Sea, Sean Hanley

Theses and Dissertations

The Whelming Sea is a thirty-minute experimental documentary that reveals the moments of entanglement between three animals living along the Mid-Atlantic shoreline; curious humans, spawning horseshoe crabs, and migratory shorebirds. Working from the realm of multispecies ethnography, the film shifts the subjective positioning of the viewer between the human and nonhuman to suggest the complexity of our enmeshed experience. In the face of this current era of mass extinction, the film explores the limitations and poetic possibilities of scientific encounters with the lives of others.

Histological Evidence Of Annual And Lunar Reproductive Rhythms Of Atlantic Sea Urchin, Arbacia Punctulata In The Gulf Of Mexico: Changes In Nutritive Phagocytes In Relation To Gametogenesis, Eleazar Hernandez Ii

Theses and Dissertations

Environmental phenomena such as temperature, photoperiod, tidal cycle, and lunar rhythm act as external cues that stimulate the reproductive activity of marine organisms. In this study, I report the annual and lunar reproductive cycles, and changes in nutritive phagocytes (NPs) in relation to gonadal maturation of Atlantic sea urchin (Arbacia punctulata, a primeval species). Monthly and weekly changes in gonadal development/maturation were observed histologically. In male, the testicular lobules were densely packed with sperm from June to August. In female, on the other hand, mature eggs first appeared in some ovaries in May, numerically increased from June to …