Marine Biology Commons^™

Responses Of Benthic Calcifying Algae To Ocean Acidification Differ Between Laboratory And Field Settings, Heather N. Page, Keisha D. Bahr, Tyler Cyronak, Elizabeth B. Jewett, Maggie D. Johnson, Sophie J. Mccoy

Marine & Environmental Sciences Faculty Articles

Accurately predicting the effects of ocean and coastal acidification on marine ecosystems requires understanding how responses scale from laboratory experiments to the natural world. Using benthic calcifying macroalgae as a model system, we performed a semi-quantitative synthesis to compare directional responses between laboratory experiments and field studies. Variability in ecological, spatial, and temporal scales across studies, and the disparity in the number of responses documented in laboratory and field settings, make direct comparisons difficult. Despite these differences, some responses, including community-level measurements, were consistent across laboratory and field studies. However, there were also mismatches in the directionality of many responses …

Element Contamination In Port Everglades – Preparing For Ecological Impacts, Laura White

All HCAS Student Capstones, Theses, and Dissertations

Port dredging is of economic importance worldwide but its impacts to the marine environment through the remobilization of elemental contaminants are not well understood. A massive deepening and widening of Port Everglades, Florida, will begin in 2023. Contaminated sediment disturbed during the dredging process could be released and prove to be harmful to three coral reef tracks located beginning 1.5 miles away from the port. This study focused on identifying and quantifying 14 different trace elements: arsenic (As), cadmium (Cd), cobalt (Co), chromium (Cr), copper (Cu), mercury (Hg), lead (Pb), manganese (Mn), molybdenum (Mo), nickel (Ni), selenium (Se), tin (Sn), …

Impacts Of Deepwater Horizon On Fish And Fisheries: What Have We Learned About Resilience And Vulnerability In A Coupled Human-Natural System?, S.A. Murawski, C.B. Paris, Tracey Sutton, M. Cockrell, S. O'Farrell, J. Sanchirico, E. Chancellor, L. Perruso

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The Deepwater Horizon (DWH) oil spill occurred in a region of the Gulf of Mexico (GoM) supporting abundant, diverse and valuable communities of fishes and fishers. The economy of the northern GoM is inextricably tied to the natural resource bases of the region (tourism, fishing, oil and gas, etc.) and thus the coupling between the human and ecological systems is tight and subject both feed-back and, to some extent, feed-forward controls. Management actions taken during the 87-day DWH spill incident included the closure of over 280,000 km² of productive fishing area (about 1/3 of USA federal waters in the …

Validation Of Landsat 8 High Resolution Sea Surface Temperature Using Surfers, Quinton Vanhellemont, Robert J. W. Brewin, Philip J. Bresnahan, Tyler Cyronak

Marine & Environmental Sciences Faculty Articles

Nearshore coastal waters are highly dynamic in both space and time. They can be difficult to sample using conventional methods due to their shallow depth, tidal variability, and the presence of breaking waves. High resolution satellite sensors can be used to provide synoptic views of Surface Temperature (ST), but the performance of such ST products in the nearshore zone is poorly understood. Close to the shoreline, the ST pixels can be influenced by mixed composition of water and land, as a result of the sensor’s spatial resolution. This can cause thermal adjacency effects due to the highly different diurnal temperature …

Phytoplankton Community Response To Upwelling Events: Distribution And Abundance Investigated Using Genomic Methods, Sveinn V. Einarsson

OES Theses and Dissertations

Upwelling events are known to support blooms of phytoplankton, important primary producers at the base of the oceanic food web. Phytoplankton community structure changes in response to upwelling support higher trophic level growth and increased efficiency of carbon export from the euphotic zone. While these events occur globally, this study examined upwelling in coastal regions, where alongshore winds can drive Ekman transport and upwelling of deeper waters. The two upwelling regimes examined were the California Current System and the Alaskan Beaufort Sea. In the California Current System, the relative diatom community composition was examined using 18S sequencing to determine how …

A Meshless Method With Radial Basis Function For Solving Unsaturated Flow In Heterogeneous Porous Media, Cheng-Yu Ku, Chih-Yu Liu, Wei-Po Huang, Jing-En Xiao

Journal of Marine Science and Technology

This paper presents a study for solving unsaturated flow in heterogeneous porous media using the meshless method with the radial basis function (RBF). For modeling the nonlinear hydrological process in unsaturated zone, an exponential model is introduced in the Richards equation such that we may obtain the linearized Richards equation. We adopt the multiquadric function as the RBF in the meshless method for solving the linearized Richards equation. For simulating the unsaturated flow problems in layered heterogeneous soils, the flux and the head must satisfy the continuity condition at the interface. Several examples are carried out for modeling the hydrological …

Dioxins Contamination In Sediment And Their Effect On Accumulation In The Portuguese Oyster (Crassostrea Angulata) And White Shrimp (Litopenaeus Vannamei), Yin-Yu Chen, Yu-Sheng Wu, Hsiang-Yin Chen, Zhen-Hao Liau, Fan-Hua Nan

Journal of Marine Science and Technology

This research aims to realize whether the dioxin accumulation in the oyster and white shrimp which were cultured in the dioxin pollutant sediment. This presented evidence indicated that dioxin was detected in all experimental groups with high concentration accumulated in experiment animals. Observation of the concentration, the PCDD/F, 2,3,7,8-T4CDD was with high concentration in the sediment and declined with the time elapsed. Detection of the dioxin accumulated in the animal, the accumulative maximum amounts was in the oyster as 3746.16 (pg-TEQ/g d.w.) and in the shrimp as 705.44 (pg-TEQ/g d.w.). The detected amount of dioxin in the supernatant was quite …

Catch Rates And Distribution Pattern Of The Silky Shark, Carcharhinus Falciformis, Caught By The Taiwanese Large-Scale Longline Fishery In The Indian Ocean, Chia Yun Li, Xing-Han Wu, Shang Yin Vanson Liu, Sheng-Ping Wang, Wen-Pei Tsai

Journal of Marine Science and Technology

The silky shark, Carcharhinus falciformis, is widely distributed in tropical and temperate waters, and it is a common bycatch species for tuna longline fisheries. This study examined the distribution of and presents relative abundance indices of the silky shark in the Indian Ocean by using logbook and observer data from the Taiwanese large-scale tuna longline fishery between 2005 and 2019. Due to the high zero catch rate, a zero-inflated negative binomial (ZINB) model was used to standardize catch per unit effort. Due to a lack of detailed targeting information, the fishery strategy was identified by using cluster analysis based on …

Accumulation And Bioavailability Of Heavy Metals (Cadmium, Chromium, Nickel, Lead And Zinc) In Water And Sediment Samples In The Musa Creek, Northwest Coasts Of The Persian Gulf, Saghafiankhoo Sedigheh, Battaleb-Looie Sedigheh, Amanipoor Hakimeh, Dravishi Khatooni Javad, Ghanemi Kamal

Journal of Marine Science and Technology

The current study aimed to investigate the total concentrations of heavy metals in water and sediment samples as well as their bioavailability in sediments of Musa Creek. Twenty samples including 10 sediments and 10 water samples were collected from 10 stations. The concentration of heavy metals was measured using inductively coupled plasma–mass spectrometry. The bioavailability of heavy metals was carried out by first step of Tessier sequential extraction method so called single extraction in the manuscript. The results showed that the mean concentrations of cadmium, chromium, nickel, and zinc in water samples was 0.17, 7.44, 43.80, and 8.85 µg/L, respectively. …

Using The Inverse Method To Investigate Flow Models For Mixed Convection Of Annular Finned Tube Heat Exchanger, Han-Taw Chen, Cheng-Hui You, Wei-Lun Hsu, Jiang-Ren Chang

Journal of Marine Science and Technology

The inverse heat conduction method (IHCM) and three-dimensional (3D) computational fluid dynamic (CFD) in combination with are used to select the appropriate flow model and near-wall treatment for the mixed convection of the annular finned tube heat exchanger. Thus, the numerical results obtained by all k-ε models and near-wall treatments are yielded for 4 m/s ≤ Va ≤ 5 m/s. First, IHCM combined with is applied to estimate and Q values. The obtained estimates of and Q are used as reference values for CFD. The results show that the Tk and results obtained by the standard (STD) k-ε model with …

Parametric Analyses Of The Dynamic Response And Fatigue Life Of A Compliant Vertical Access Riser With Internal Flow, Fuheng Li, Haiyan Guo, Xiaomin Li, Zhen Liu, Honglu Gu, Peng Cui

Journal of Marine Science and Technology

Subsea interventions on wellheads can be directly performed from a platform using a compliant vertical access riser (CVAR), thereby incurring tremendous economic benefits. The dynamic response and the fatigue damage of a CVAR subjected to regular waves are important for assessing its application feasibility. Therefore, a reasonable numerical model is presented for assessing the damage to a CVAR considering the internal flow using the slender rod theory. The finite element method combined with a Newmark-β scheme is employed to discretize the equations and update the time integration. The Palmgren-Miner rule is applied for fatigue life prediction, focusing on the wave-induced …

Prediction Of Remaining Useful Life Of Wind Turbine Shaft Bearings Using Machine Learning, Jinsiang Shaw, Bingjie Wu

Journal of Marine Science and Technology

Wind turbines are a major trend in the current green energy market. Wind energy is abundant, and if utilized properly, can result in significant reductions in carbon emissions. Therefore, the development of wind power systems is urgently required. However, wind turbines are mainly built in unmanned areas. Regular inspections require substantial manpower and material resources, and doubts regarding the accuracy of the inspected data may occur. Therefore, it is necessary to establish an automatic diagnostic method for determining the remaining useful life (RUL) of a wind turbine to facilitate predictive maintenance. In this study, a multi-class support vector machine (SVM) …

Supply Chain Management For Superyacht Construction In Taiwan, Chun Pong Wong

Journal of Marine Science and Technology

In the last 20 years, Taiwan’s superyacht construction industry has performed well in the global market; however, numerous yacht builders still practice traditional supply chain management (SCM), which is often inefficient and regularly leads to time and cost overruns. This study aimed to answer two research questions: 1) what SCM challenges does the superyacht construction industry face? and 2) what SCM strategies and practices should be adopted to improve the efficacy and profitability of superyacht construction companies?

Numerous studies have explored supply chains (SCs) and SCM, but few have focused on the superyacht construction industry. Superyacht construction projects are highly …

The Impact Of Variable Curing Conditions On The Properties And Microstructures Of Mixtures Of Ground Granulated Blast Furnace Slag And Circulating Q1 Fluidized Bed Combustion Ash, Shao-Heng Hsieh, Wei-Chung Yeih, Ran Huang

Journal of Marine Science and Technology

The use of Portland cement, an important construction material, is encountering growing challenges because of its adverse environmental impacts. In this study, a new hydration system without Portland cement, which blends ground granulated blast furnace slag (GGBFS) and circulating fluidized bed combustion (CFBC) ash, was developed and tested. The variables included the effect of different types of CFBC ash, the mass ratios between CFBC ash and GGBFS, and different curing temperatures. The mortar properties were determined through the compressive strength test, absorption test, shrinkage test, X-ray diffraction, scanning electron microscopy, and energy-dispersive X-ray spectroscopy. The main results were as follows: …

A Marine Gis-Based Alert System To Prevent Vessels Collision With Offshore Platforms, Sheng-Long Kao, Ki-Yin Chang, Tai-Wen Hsu

Journal of Marine Science and Technology

How to effectively use an intelligent aid-to-navigation (AtoN) to prevent ships from accidentally colliding with offshore marine platforms (OMPs) is an important issue for maritime environment. This study proposes a novel collision alert system with three components to process Automatic Identification System (AIS) data in the cloud and broadcast AtoNs to ships in order to avoid collision with OMPs. The first component receives as input fuzzy linguistic variables (vessel size, relative speed, and approach distance) from the AIS data and calculates the radius of the guarding ring. The second component serves a Marine GIS (MGIS), where the system simulates the …

Peruvian Fur Seals As Archivists Of El Niño Southern Oscillation Effects, Mickie Rae Edwards, Susana Cardenas-Alayza, Michael Adkesson, Mya Daniels-Abdulahad, Amy Hirons

Marine & Environmental Sciences Faculty Articles

Peru’s coastal waters are characterized by significant environmental fluctuation due to periodic El Niño- La Niña- Southern Oscillation (ENSO) events. This variability results in ecosystem-wide food web changes which are reflected in the tissues of the Peruvian fur seal (Arctocephalus australis). Stable isotope ratios (δ¹³C and δ¹⁵N) in Peruvian fur seal vibrissae (whiskers) are used to infer temporal primary production and dietary variations in individuals. Sea surface temperature anomaly (SSTA) recordings from the Niño 1+2 Index region captured corresponding ENSO conditions. Fluctuations in δ¹⁵N values were correlated to SSTA records, indicating that …

Nutrient Cycling In Tropical And Temperate Coastal Waters: Is Latitude Making A Difference?, Christian Lønborg, Moritz Müller, Edward C. V. Butler, Shan Jiang, Seng Keat Ooi, Dieu Huong Trinh, Pui Yee Wong, Suryati M. Ali, Chun Cui, Wee Boon Siong, Erik S. Yando, Daniel A. Friess, Judith A. Rosentreter, Bradley D. Eyre, Patrick Martin

Biological Sciences Faculty Publications

Tropical coastal waters are highly dynamic and amongst the most biogeochemically active zones in the ocean. This review compares nitrogen (N) and phosphorus (P) cycles in temperate and tropical coastal waters. We review the literature to identify major similarities and differences between these two regions, specifically with regards to the impact of environmental factors (temperature, sunlight), riverine inputs, groundwater, lateral fluxes, atmospheric deposition, nitrogen fixation, organic nutrient cycling, primary production, respiration, sedimentary burial, denitrification and anammox. Overall, there are some similarities but also key differences in nutrient cycling, with differences relating mainly to temperature, sunlight, and precipitation amounts and patterns. …

Climate Process Team: Improvement Of Ocean Component Of Noaa Climate Forecast System Relevant To Madden-Julian Oscillation Simulations, Toshiaki Shinoda, Suyang Pei, Wanqiu Wang, Joshua X. Fu, Ren-Chieh Lien, Hyodae Seo, Alexander Soloviev

Marine & Environmental Sciences Faculty Articles

Given the increasing attention in forecasting weather and climate on the subseasonal time scale in recent years, National Oceanic and Atmospheric Administration (NOAA) announced to support Climate Process Teams (CPTs) which aim to improve the Madden-Julian Oscillation (MJO) prediction by NOAA’s global forecasting models. Our team supported by this CPT program focuses primarily on the improvement of upper ocean mixing parameterization and air-sea fluxes in the NOAA Climate Forecast System (CFS). Major improvement includes the increase of the vertical resolution in the upper ocean and the implementation of General Ocean Turbulence Model (GOTM) in CFS. In addition to existing mixing …

Ecological Risk Assessment For The Temperate Demersal Elasmobranch Resource, Department Of Primary Industries And Regional Development, Western Australia

Fisheries research reports

No abstract provided.

The Influence Of Bottom Type And Water Column Stratification On Reef Fish Community Structure At Gray’S Reef National Marine Sanctuary, Bridget Campbell

Honors Theses

Understanding the physical and oceanographic differences across reef habitats can help researchers assess how those differences influence fish distribution and community structure, which leads to a better understanding of what a healthy reef system looks like. The traditional methods used to assess fish communities on temperate reefs are limited and often focus solely on either the reef structure or water column conditions alone. An assessment of both data sets yields a more complete understanding of the ecosystem as a whole. In this study, Gray’s Reef National Marine Sanctuary (GRNMS) was surveyed both inside and outside a Marine Protected Area (MPA) …

Using Ecological Diversity Analyses To Characterize The Availability Of Healthy Food And Socio-Economic Food Deserts, Annie Goyanes, J. Matthew Hoch

Marine & Environmental Sciences Faculty Articles

“Food deserts” are usually defined as geographic areas without local access to fresh, healthy food. We used community ecology statistics in supermarkets to quantify the availability of healthy food and to potentially identify food deserts as areas without a diverse selection of food, rather than a binary as to whether fresh food is present or not. We test whether produce diversity is correlated with neighborhood income or demographics. Abundance and diversity of fresh produce was quantified in supermarkets in Broward County, Florida, USA. Neighborhood income level and racial/ethnic makeup were retrieved from the U.S. Census and American Community Survey. Although …

Megafauna Of The German Exploration Licence Area For Seafloor Massive Sulphides Along The Central And South East Indian Ridge (Indian Ocean), Klaas Gerdes, Terue Cristina Kihara, Pedro Martínez Arbizu, Thomas Kuhn, Ulrich Schwarz-Schampera, Christopher L. Mah, Jon L. Norenburg, Thomas D. Linley, Kate Shalaeva, Enrique Macpherson, Dennis Gordon, Sabine Stöhr, Charles G. Messing, Simon Bober, Theresa Guggolz, Magdalini Christodoulou, Andrey Gebruk, Antonina Kremenetskaia, Andreas Kroh, Karen Sanamyan, Kathrin Bolstad, Leon Hoffman, Andrew J. Gooday, Tina Molodtsova

Marine & Environmental Sciences Faculty Articles

Background

The growing interest in mineral resources of the deep sea, such as seafloor massive sulphide deposits, has led to an increasing number of exploration licences issued by the International Seabed Authority. In the Indian Ocean, four licence areas exist, resulting in an increasing number of new hydrothermal vent fields and the discovery of new species. Most studies focus on active venting areas including their ecology, but the non-vent megafauna of the Central Indian Ridge and South East Indian Ridge remains poorly known.

In the framework of the Indian Ocean Exploration project in the German license area for seafloor massive …

Metabolomics Of Healthy And Stony Coral Tissue Loss Disease Affected Montastraea Cavernosa Corals, Jessica M. Deutsch, Olakunle A. Jaiyesimi, Kelly A. Pitts, Jay Houk, Blake Ushijima, Brian K. Walker, Valerie J. Paul, Neha Garg

Marine & Environmental Sciences Faculty Articles

Stony coral tissue loss disease, first observed in Florida in 2014, has now spread along the entire Florida Reef Tract and on reefs in many Caribbean countries. The disease affects a variety of coral species with differential outcomes, and in many instances results in whole-colony mortality. We employed untargeted metabolomic profiling of Montastraea cavernosa corals affected by stony coral tissue loss disease to identify metabolic markers of disease. Herein, extracts from apparently healthy, diseased, and recovered Montastraea cavernosa collected at a reef site near Ft. Lauderdale, Florida were subjected to liquid-chromatography mass spectrometry-based metabolomics. Unsupervised principal component analysis reveals wide …

The Design, Production And Validation Of The Biological And Structural Performance Of An Ecologically Engineered Concrete Block Mattress – A Nature Inclusive Design For Shoreline And Offshore Construction, Ido Sella, T. Hadary, A. Rella, Bernhard Riegl, Denise Swack, S. Perkol-Finkel

Marine & Environmental Sciences Faculty Articles

Over the past decade, the scientific community has studied, experimented, and published a notable body of literature on ecological enhancement of coastal and marine infrastructure (CMI). The Nature-Inclusive Design (NID) approach refers to methods and technologies that can be integrated into the design and construction of CMI to create suitable habitat for native species (or communities) whose natural habitat has been degraded or reduced. To examine the compliance of new environmentally sensitive technologies with structural requirements and fiscal restraints, while providing ecosystem and habitat value, this paper presents the findings of a structural-economical-biological analysis of ecologically engineered Articulated Concrete Block …

Stable Isotopes Used To Infer Trophic Position Of Green Turtles (Chelonia Mydas) From Dry Tortugas National Park, Gulf Of Mexico, United States, David C. Roche, Michael S. Cherkiss, Brian J. Smith, Derek A. Burkholder, Kristen M. Hart

Marine & Environmental Sciences Faculty Articles

Evaluating resource use patterns for imperiled species is critical for understanding what supports their populations. Here we established stable isotope (δ¹³C, δ¹⁵N) values for the endangered green sea turtle (Chelonia mydas) population found within the boundaries of Dry Tortugas National Park (DRTO), south Florida, USA. There is little gene flow between turtles sampled at DRTO and in other rookeries in Florida, underscoring the need to study this distinct population. Between 2008 and 2015 we collected multiple sample types (skin [homogenized epidermis/dermis], whole blood, red blood cells, plasma, carapace) from 151 unique green turtles, including …

Effectiveness Against White Sharks Of The Rpela Personal Shark Deterrent Device Designed For Surfers, Craig Blount, Dan Pygas, Marcus P. Lincoln Smith, Daryl P. Mcphee, Colby Bignell, Ocean Ramsey

Journal of Marine Science and Technology

Many shark bites to humans, including fatalities, have involved surfers. Various personal shark deterrents are commercially available to surfers, including Rpela v2, which is a battery-powered device fitted to a surfboard. It produces an electric field around the surfer aimed at deterring sharks from approaching or biting by disrupting their electro-reception organs. The device was tested on white sharks (Carcharodon carcharias) at Salisbury Island, Western Australia. In total, 46 trials were done with the Rpela v2 either active or not active to determine the device’s effect on sharks’ response to a floating board with fish bait attached (to tempt a …

Inter-Annual Changes Of Water Temperature In The Southern South China Sea's Continental Shelf: The Influence Of Enso On Malaysian Waters, Afifi Johari, Mohd Fadzil Akhir, Muhammad Naim Satar, Zuraini Zainol, Guo Jingsong

Journal of Marine Science and Technology

An extensive amount of data from the World Ocean Database (WOD) that covers the southern South China Sea (SSCS) were analysed to study the long-term trends and variations of the El-Nino Southern Oscillation (ENSO) event. The WOD data were selected from 1951 to 2010, which included the area within 0–10 °N and 100–117 °E. El-Nino and La-Nina anomaly results showed that the sea surface temperature anomalies (SSTa) trend of SSCS was higher during offset-El-Nino years and lower during offset-La-Nina years. Besides, the inter-annual vertical water temperature profile revealed that the deepening of the warmer water temperature occurred in February and …

The Eumedonine Genera Eumedonus H. Milne Edwards, 1834, And Gonatonotus White, 1847 (Crustacea: Brachyura: Pilumnidae) In Taiwan, Peter K. L Ng, Chia-Wei Lin

Journal of Marine Science and Technology

Two species of eumedonine crabs, Eumedonus zebra Alcock, 1895, and Gonatonotus nasutus Chia & Ng, 2000, are recorded from Taiwan, the former for the first time. Both are also new genera records for the island. Notes on variation are noted and their taxonomy briefly treated. The number of eumedonine species, all of which are obligate symbionts on echinoderms, known from the island is now seven genera and seven species.

An Analysis Of Consumer Evaluations Of The “Tagonoura Shirasu” Certification Under The Japan Geographical Indication Protection System, Yu-Heng Lu, Takahiro Sajiki

Journal of Marine Science and Technology

Over time, the Geographical Indication (GI) protection system has been independently adopted in more than 100 countries worldwide. In Japan, the GI protection system has been operating since 2015 in response to a growing interest in local brands. Therefore, based on a questionnaire survey, we econometrically analyze the consumer evaluation of Shizuoka Prefecture’s Shirasu “Tagonoura Shirasu,” which is registered under the GI protection system. Shirasu is a collective term for long and narrow larvae such as anchovy (Engraulis japonicus), sardine (Sardinops melanostictus), or red-eye round herring (Etrumeus sadina). Based on the contingent valuation method, we clarified that consumers' additional willingness …

A Two-Stage Approach To Integrate Vessel Geo-Tracking Data And Logbooks For Monitoring Fishing Activity Of Coastal Fisheries In Waters Off Northwestern Taiwan, Yi-Jou Lee, Nan-Jay Su, Cheng-Hsin Liao, Wei-Chuan Chiang, Chun-Huei Li

Journal of Marine Science and Technology

Catch and fishing effort data are fundamental information to stock assessment and fisheries management, but difficult to obtain without the support of administration and sound fishery data collection system. This study integrated various sources of data from a simplified vessel geo-tracking system and logbooks from interviews with captains of coastal gillnet fisheries. We developed a two-step approach based on hierarchical cluster analysis to characterize the operation patterns and infer the fishing activities of the fishery. Results showed that the fishing effort in terms of operation duration could be estimated precisely for various vessel sizes, with catch composition and harvest information …