Marine Biology Commons^™

Interactions Between Sediment Mechanical Structure And Infaunal Community Structure Following Physical Disturbance, William Cyrus Roger Clemo

<strong> Theses and Dissertations </strong>

Shallow, river-influenced coastal sediments are important for global carbon storage and nutrient cycling and provide a habitat for diverse communities of invertebrates (infauna). Elevated bed shear stress from extreme storms can resuspend, transport, and deposit sediments, disrupting the cohesive structure of muds, and sorting and depositing sand eroded from beaches. These physical disruptions can also resuspend or smother infauna, decreasing abundances and changing community structure. Infaunal activities such as burrowing, tube construction, and feeding can impact sediment structure and stability. However, little is known about how physical disturbance impacts short and long-term sediment habitat suitability and whether disturbance-tolerant infauna influence …

Connecting Social And Ecological Systems In Small-Scale Fisheries In The Philippines, Sara Eisler Marriott

Dissertations

Nearly 50% of all marine fish capture in the Philippines is from artisanal fisheries, most of which is un- or under-reported. As in many emerging nations around the world, the Philippines cannot fully address overfishing by managing only half of the catch that comes from commercial fisheries. Marine reserves are a popular governance strategy for conservation and of growing interest for fisheries management. Many marine reserves in the Philippines, however, are not considered effective. In 2014, Rare, an international NGO, implemented a community-based management program to increase the effectiveness of the marine reserves, and while it found biomass increased, there …

Optimizing Strategies To Hydraulically Plant Atlantic Salmon Eggs Based On Fry Dispersal Patterns, Ernest J. Atkinson

Electronic Theses and Dissertations

The Gulf of Maine Distinct Population Segment of Atlantic Salmon has suffered from habitat loss and exploitation over the last century. Hatchery supplementation has prevented the extirpation of the species, but stocking methods represent tradeoffs between survival, domestication, and logistics. Egg planting, the use of eyed embryos, maximizes natural rearing opportunities which can be important for adaptation. This method, however, is logistically demanding and requires significant labor over large spatial, but short temporal, scales dictated by the ontogeny of the fish. However, the survival and dispersal behavior of Atlantic Salmon fry immediately after emergence from eggs planted in artificial nests …

Understanding The Impacts Of Anthropogenic Effects An Habitat Variability Interactions On Maine's Rocky Intertidal Ecosystem, Laura Braun

Electronic Theses and Dissertations

The rocky intertidal ecosystem is an important ecological and cultural aspect of the picturesque Maine coast, playing a vital role in not only Maine’s coastal ecosystem, but also to Maine’s economy. It’s distinct community structure along the sharp elevational gradient and the presence of daily stressors (wave action, heat, and desiccation), make the rocky intertidal ecosystem an important model ecosystem to monitor for effects from anthropogenic impacts. In this thesis, I describe attempts to monitor and understand the impacts of two of these anthropogenic impacts on this system: climate change and industrial harvesting of Ascophyllum nodosum along Maine’s coast. For …

Developing A Miniature Smart Boat For Marine Research, Michael Isaac Eirinberg

Computer Engineering

This project examines the development of a smart boat which could serve as a possible marine research apparatus. The smart boat consists of a miniature vessel containing a low-cost microcontroller to live stream a camera feed, GPS telemetry, and compass data through its own WiFi access point. The smart boat also has the potential for autonomous navigation. My project captivated the interest of several members of California Polytechnic State University, San Luis Obispo’s (Cal Poly SLO) Marine Science Department faculty, who proposed a variety of fascinating and valuable smart boat applications.

Climate-Driven Stock Shifts And Expansions In The U.S. Northeast Shelf: Identifying Challenges, Opportunities, And Barriers Through Fishermen And Manager Perspectives, Sophie A. Swetz

All Theses And Dissertations

Climate-driven warming in the U.S. Northeast Shelf (NES) has led to changes in the spatial distributions of many marine resources. Shifts and expansions of commercially important fish stocks pose major challenges to fishermen and fisheries managers in this region. American lobster (Homarus americanus) in the Gulf of Maine (GOM) is one of these impacted stocks and is projected to continue its shift towards more northern and offshore areas. Continued ocean warming could potentially reduce the GOM lobster stock by up to 60% over the next several decades. Given Maine’s reliance on its lobster fishery—which contributes over 80% of …

A Spatial Assessment Of Impacts To The Flats Fishery By Recreational Boating In The Florida Keys National Marine Sanctuary, Kristin Anderson

All HCAS Student Capstones, Theses, and Dissertations

The recreational flats fishery in the Florida Keys is a significant component of the marine resource-based economy, exceeding $465 million (USD) in annual economic impact. Permit (Trachinotus falcatus), bonefish (Albula vulpes), and tarpon (Megalops atlanticus) are the three main species targeted by flat fishers. Those participating in this fishery generally practice catch-and-release angling therefore, the fishery is considered a more sustainable marine use compared to more traditional commercial fisheries. However, with population and tourism rising in South Florida, the fishery is increasingly threatened by habitat degradation and user conflicts. Ongoing revisions to the Florida …

New England’S Underutilized Seafood Species: Defining And Exploring Marketplace Potential In A Changing Climate, Amanda Davis

Masters Theses

New England’s seafood industry has been searching for opportunities to diversify their landings and build resilience as it faces socio-economic challenges from a changing climate. Developing markets for underutilized species is one way the New England community could help their seafood industry build resilience. This thesis identified New England’s underutilized fish species and explored their marketplace potential by examining their availability in a changing climate, current availability to consumers, and consumers’ responses. In Chapter I, I account how New England’s seafood preferences have changed over time. In Chapter II, I identify New England’s seven underutilized seafood species: 1) Acadian redfish …

A Management Strategy Evaluation Of The Impacts Of Interspecific Competition And Recreational Fishery Dynamics On Vermilion Snapper (Rhomboplites Aurorubens) In The Gulf Of Mexico, Megumi C. Oshima

Dissertations

In the Gulf of Mexico (GOM), Vermilion Snapper (Rhomboplites auroruben), are believed to compete with Red Snapper directly for prey and habitat. The two species share similar diets and have significant spatial overlap in the Gulf. Red Snapper are thought to be the dominate competitor, forcing Vermilion Snapper to feed on less nutritious prey when local resources are depleted. In addition to ecological pressures, GOM Vermilion Snapper support substantial commercial and recreational fisheries. Over the past decade, recreational landings have steadily increased, reaching a historical high in 2018. One cause may be stricter regulations for similar target species such as …

Bull Kelp (Nereocystic Lutkeana) Restoration And Management In Northern California, Olivia Johnson

Master's Projects and Capstones

Northern California’s coastal marine ecosystems support one of the most productive and biodiverse habitats on the planet. Bull kelp forests (Nereocystic lutkeana) form habitats for an abundance of marine mammals, sea bird, fish, and invertebrates. In recent years, compounding ecological and climatic factors have disrupted the balance of the bull kelp forests and led to an unprecedented loss of bull kelp biomass and canopy cover. These areas that are typically teeming with marine life have shifted into a stable state of sea urchin barrens due to over grazing of bull kelp by purple sea urchins (Strongylocentrotus pupuratus). These sea urchin …

Examining The Northern Shrimp Fishery In A Changing Gulf Of Maine, Ashley N. Charleson

Electronic Theses and Dissertations

Northern Shrimp (Pandalus borealis) once supported a key commercial fishery in the State of Maine. Since its closure in 2013, the stock has remained in a particularly vulnerable state following recruitment failure, overfishing, and rising water temperatures. Furthermore, without this source of supplemental income, local fishermen have also experienced financial stress following unstable fishing conditions in other fisheries. The collective goal of this research project was to assess factors impacting the feasibility of reopening and maintaining this vulnerable winter fishery. These goals are addressed over 4 chapters. Chapter two offers insight regarding what is most often omitted from the regulatory …

Distribution, Density, Movement, And Support For Management Of Mountain Sucker, Pantosteus Jordani, In The Black Hills Of South Dakota, Seth J. Fopma

Electronic Theses and Dissertations

Mountain Sucker, Pantosteus jordani, is a cold-water species native to the Intermountain West. Fringe populations of Mountain Sucker have experienced declines in recent decades. The population of Mountain Sucker found in the Black Hills of South Dakota represents the eastern fringe of the species’ native range. Recognized as both an indicator of biologic health and as a species of greatest conservation need in South Dakota, recent studies have suggested significant declines in both distribution and abundance. Despite the recent study of Mountain Sucker in the region, increased understanding of Mountain Sucker ecology is needed to effectively manage for the conservation …

The Vezo Communities And Fisheries Of The Coral Reef Ecosystem In The Bay Of Ranobe, Madagascar, Shane Abeare

University of New Orleans Theses and Dissertations

Madagascar, a country whose extraordinary levels of endemism and biodiversity are celebrated globally by scientists and laymen alike, yet historically has received surprisingly little research attention, is the setting of the present dissertation. Here, I contribute to the need for applied research by: 1) focusing on the most intensely fished section of the Toliara Barrier Reef, the Bay of Ranobe; 2) characterizing the marine environment, the human population, and the fisheries; and 3) collecting the longest known time-series of data on fisheries of Madagascar, thereby providing a useful baseline for future analyses. In Chapter 1, the bathymetry of the Bay …

Pre-Juvenile Naked Goby (Gobiosoma Bosc) Age And Growth, Annamaria Deitz, Juliana Harding

Honors Theses

Due to the abundance of larval naked gobies, Gobiosoma bosc, within the estuarine ichthyoplankton, it is important to understand their age and growth. Naked gobies are a largely distributed, both geographically and within an estuary, small, benthic fish species. There are 3 pairs of otoliths, calcium carbonate structures within the ear canal, that detect vibrations and record the age of the fish, both daily and annually. Using laboratory-reared gobies of a known age (Tremont et al. 2015), daily signatures on the sagittal otoliths were first validated to be daily, then a growth curve for the wild caught larvae was …

Island Invasion: The Silent Crisis In Hawaii, Sophia Janssen

Pomona Senior Theses

Keeping out invasive species may, upon first review, seem like a trivial environmental cry from ecologists and deep environmentalists; a belated wish to return to an undeveloped world where nature was pristine. However invasive species create problems that impact all of us and can have far more severe consequences than changing a stunning landscape. These problems are heightened in islands like Hawaii, where the fragile ecosystems have developed over centuries of evolution and adaptation. The introduction of a disease-carrying mosquito can put the people of Hawaii at risk to many vector-born illnesses and create an epidemic, taking human life. The …

Human Dimensions Of A Participatory, Collaborative Modeling Process - Oysterfutures, Taylor Dawn Goelz

Dissertations, Theses, and Masters Projects

Participatory, collaborative modeling processes represent a unique decision-making technique within natural resources management that allows for the combination of stakeholder involvement with the analytical and predictive power of scientific models. The continued use of participatory modeling within decision-making processes depends in part upon the willingness of stakeholders to participate. Continued participation of stakeholders is key to the persistence and overall success of these processes, and yet limited information exists concerning the impacts of these processes on participants. The consideration of human dimensions advances our understanding of the design and function of participatory modeling processes, including their ability to create consensus …

Desalination Concentrate Disposal: Ecological Effects And Sustainable Solutions, Ryan Hanley

Global Honors Theses

Freshwater availability is a growing global concern, and desalination is often presented as the solution, but from this important technology comes issues of toxic waste. Ecosystems are delicate areas that contain species adapted to that specific location, and any chemical or physical changes can disrupt the fitness of species. The concentrate byproduct waste from desalination plants is toxic to species if the concentrate is not compatible with the receiving water body. A critical review of scientific articles, industry-leading books, conversations with industry experts, and information from the American Membrane Technology Association conference was used to analyze the current knowledge. Species …

Spatio-Temporal Dynamics Of Atlantic Cod Bycatch In The Maine Lobster Fishery And Its Impacts On Stock Assessment, Robert E. Boenish

Electronic Theses and Dissertations

Of the most iconic fish species in the world, the Atlantic cod (Gadus morhua, hereafter, cod) has been a mainstay in the North Atlantic for centuries. While many global fish stocks have received increased pressure with the advent of new, more efficient fishing technology in the mid-20^th century, exceptional pressure has been placed on this prized gadoid. Bycatch, or the unintended catch of organisms, is one of the biggest global fisheries issues. Directly resulting from the failed recovery of cod in the GoM, attention has been placed as to possible sources of unaccounted catch. Among the most …

Life History And Management Methods For Blueline Tilefish (Caulolatilus Microps) From The United States Mid-Atlantic Region, Michael A. Schmidtke

OES Theses and Dissertations

Blueline tilefish (Caulolatilus microps) have recently undergone an increase in landings from waters off the US Mid-Atlantic region (Virginia-Massachusetts). Currently, life history characteristics of blueline tilefish in this area are undescribed. Additionally, appropriate indices of population abundance are not available for this region, necessitating the use of data-limited management methods to set restrictions for harvest of blueline tilefish in this area. This dissertation describes growth and reproductive characteristics of blueline tilefish caught off the coast of Virginia and explores improvements of data-limited management methods that have been applied to blueline tilefish in the US Mid-Atlantic. Blueline tilefish from …

Distribution And Condition Of Stony Corals In The Veracruz Reef System National Park: A Management Perspective, Mauricio López Padierna

HCNSO Student Theses and Dissertations

The Veracruz Reef System (VRS) is located in the southwestern Gulf of Mexico. It is comprised of 28 coral reefs in various stages of development and conservation. They are protected under the Parque Nacional Sistema Arrecifal Veracruzano National Park created in 1992. There are many threats to the reefs of the VRS, including the Port and city of Veracruz, which hosts half a million inhabitants and Mexico’s oldest active port. The inhabitants of Veracruz have used reef resources for thousands of years, as evidenced in archaeological sites on Sacrificios island, and constructions throughout the city, most notably in the San …

An Analysis Of Gulf Of Maine Cod Metapopulation Structure And Localized Stability, With Application To Area-Based Fisheries Management, Derek Olson

Electronic Theses and Dissertations

The complex metapopulation structure of groundfish stocks in the Gulf of Maine, particularly Atlantic cod (Gadus morhua), is largely ignored under the current system of broad-scale stock assessment and management. This mismatch of biological and administrative scales has contributed to severe overall stock decline and localized serial depletion of Gulf of Maine cod. Such chronic management failure has led to growing calls for a more area-based, finer-scale approach to managing groundfish in the Gulf of Maine. A primary difficulty hindering the development of finer-scale groundfish management has been the challenge of estimating fishing mortality upon local stock components. …

Coral Genotype Influence On Growth And Stress Resistance In Acropora Cervicornis: Investigating Potential Energy Tradeoffs, Peter T. Grasso

HCNSO Student Theses and Dissertations

Over the last few decades coral reefs have faced unprecedented declines in health due to natural and anthropogenic sources. Until recently few studies have examined genotypic variation of growth and thermal stress resistance in Acropora cervicornis. This study aims to assess the potential for energy trade-offs between growth and thermal stress resistance by following 120 coral fragments from 12 genotypes of Acropora cervicornis over the course of 15 months to determine average growth rates for each genotype. Following the completion of the growth observation a bleaching event occurred in the lower Florida Keys providing the opportunity for examining thermal …

The Effects Of Drifting Fish Aggregating Devices On Bycatch In The Tropical Tuna Purse Seine Fisheries In The Atlantic And Indian Oceans, Julia Snouck-Hurgronje

Dissertations, Theses, and Masters Projects

Thousands of floating objects, known as drifting fish aggregating devices (dFADs), are released every year by commercial tropical tuna purse seine vessels in the three equatorial oceans to aggregate tuna and increase catch. The escalation in the number of dFADs deployed over the last three decades has caused changes in fishing effort that are poorly reflected in traditional indices of purse seine effort and catch per unit of effort (CPUE). In addition, concerns have been raised regarding the impacts of such high numbers of dFADs being deployed on both catch and bycatch species. I studied two aspects of dFAD deployments …

Factors Affecting Terrigenous Sedimentation In Coastal Bays With Coral Reefs: Implications For Monitoring The Effectiveness Of Watershed Restoration, Whitney Sears

Theses

In the Caribbean, sedimentation has been identified as a serious threat to coral reef communities. Although land-based sediment delivery to coastal waters harboring coral reefs occurs under natural conditions, human activities in the watersheds above reefs increases the erosion and delivery of terrigenous sediment to the reefs. Delivery of terrigenous sediment into marine areas below developed watersheds affects sedimentation rates, alters the composition and texture of sediments that are suspended in the water column, and/or sediments that are deposited on the sea floor and on corals.

St. John, U.S. Virgin Islands is an ideal location to study the effects of …

Surface And Subsurface Application Of Chemical Dispersants And Associated Ecosystem Impacts, Adam V. Radpour

Master's Projects and Capstones

Chemical dispersants are applied to spilled oil in marine environments when other, less controversial, methods are not adequate for the incident. They are considered to be a response method as opposed to a direct cleanup method, with the intended goals of reducing risk of exposure to sensitive shorelines, reducing environmental injury to surface-dwelling sea birds and marine mammals, and facilitating the biodegradation of spilled oil into the water column.

For this research, both surface and subsurface application of dispersants were evaluated in terms of oil characteristics and volume, and oceanic and atmospheric conditions. More data exists to support the effectiveness …

Spatial, Temporal And Demographical Analysis Of Gulf Of Mexico Research Priorities, The Effect Of The Deepwater Horizon Oil Spill, Stephen Hiller Sempier

Dissertations

A set of twenty equally-weighted national ocean research priorities were define in 2007, but it was not clear if these priorities applied for the Gulf of Mexico. A series of three longitudinal surveys of people who conduct research, sponsor research or use research for professional or recreational purposes was released that focused on the twenty research priorities and asked people how they rated each. A convenience sampling method was employed, which suggests that the results are constrained to the survey respondents and should not be extrapolated to a larger population. More than 1,500 people completed the 2013 GMRP survey and …

The Effects Of Chanellization And Channel Restoration On Aquatic Habitat And Biota Of The Pecos River, New Mexico, Darrel J. Mecham

Electronic Theses and Dissertations

River channelization has been shown to negatively impact riverine ecosystems by degrading aquatic habitat conditions, decreasing diversity of both fish and aquatic invertebrate assemblages and impairing fish recruitment. As knowledge of the negative impacts of channelization has increased, so have channel restoration efforts. We evaluated a recent channel restoration project on the Pecos River, New Mexico by comparing abiotic and biotic conditions among five reaches of river, including the restored reach, an unchannelized reach and a channelized reach all prone to streamflow intermittence and an unchannelized reach and channelized reach more perennial in nature. Our first objective was to assess …

Water Water Everywhere: Analyzing Long Island's Water Issues And Finding Solutions For A Sustainable Future, Anthony T. Becker

2014 Student Theses

Over three million people call Long Island their home. With access to beautiful landscapes, world-renowned beaches, and proximity to New York City, it is no wonder that so many proudly call this geographic stretch of glacial till their home. However, throughout the years our actions do not necessarily reflect this affection we have to our home. Years of sprawl and human infestation across the island have resulted in widespread environmental degradation. Specifically, the water we drink and the beaches we enjoy have become endangered. I plan on studying the urban ecology of how intensified population growth led to the eutrophication …

Advocacy For Marine Management: Contributions To A Policy Advocacy Initiative In The Maldives, Neal Collins

Capstone Collection

On June 5, 2009 a 42-­‐km2 area of coral reef situated in the Alif Dhaalu (South Ari) atoll of the Republic of Maldives was designated the South Ari Atoll Marine Protected Area (S.A. MPA) due to a globally significant whale shark aggregation site. The whale shark is notorious for its gargantuan size and docile nature, which has led to a burgeoning tourist industry that gives people the opportunity to swim with the gentle giants in tropical sites such as the Maldives. The S.A. MPA receives tens of thousands of visitors a year that engage in whale shark excursions, however, there …

Effects Of Anthropogenic Stressors And Changes In Biodiversity On Lower Chesapeake Bay, Va Usa Seagrass Systems, Rachael E. Blake

Dissertations, Theses, and Masters Projects

Anthropogenic stressors are increasingly changing conditions in coastal areas and impacting important habitats. But, when multiple stressors act simultaneously, their effects on ecosystems become more difficult to predict. In Chesapeake Bay, USA, predictions suggest that anthropogenic stressors from climate change, such as warming temperatures, may increase the frequency and severity of storm events, leading to increased freshwater, nutrient, and sediment inputs. Coastal development, another source of anthropogenic stressors, continues to increase with growing coastal populations, and may lead to altered sediment characteristics, habitat fragmentation, altered food webs, and loss of vegetated habitats. Community processes may interact with stressors, for example, …