Marine Biology Commons^™

Inferring Exposure To Harmful Pseudo-Nitzschia Blooms From Ocean-To-Estuary Gradients In Domoic Acid Concentrations In Humboldt Bay Bivalves, Natasha Hope Ficzycz Winnacott

Cal Poly Humboldt theses and projects

Harmful algal blooms (HABs) result from outbreaks of any of several different species of toxin-producing phytoplankton and that can have major detrimental effects on marine ecosystems and pose severe health and economic threats to human communities. Of particular concern along the United States West Coast are HABs of pennate diatom genus Pseudo-nitzschia that produce the potent neurotoxin domoic acid (DA). The coastal ocean between Cape Mendocino, CA, and Cape Blanco, OR is a hotspot for Pseudo-nitzschia spp. HABs. Such blooms impact coastal fisheries and pose a potential threat to aquaculture operations in Humboldt Bay, California’s second largest estuary and largest …

Effects Of Oyster Aquaculture On Elasmobranch Abundance And Habitat Use In Humboldt Bay, Ca, Rose Harman

Cal Poly Humboldt theses and projects

Habitat modification from aquaculture can have large effects on natural communities, with the habitat complexity provided by aquaculture structure positively influencing benthic invertebrates and small fish abundance. However, the effects of aquaculture on larger predatory fish like elasmobranchs (i.e., sharks and rays), which use nearshore habitat to forage and provide top-down control of these ecosystems, is largely unknown. Over two years, I deployed baited remote underwater video systems (BRUVS) to examine the effects of oyster aquaculture and environmental variables such as habitat (mudflat or eelgrass), salinity (ppt), turbidity (m), temperature (°C), pH (mV), dissolved oxygen (mg · L^-1), …

A Characterization Of The Sandy Beach Surf Zone Fish Community And Their Ecology In Northern California And The Effects Of Marine Protected Areas, Katie B. Terhaar

Cal Poly Humboldt theses and projects

Historically written off as dull and homogenous, the dynamics of the sandy beach surf zone remains under studied world-wide. Northern California has been no exception to this global standard, as the sandy beach surf zone ecosystem in this region has yet to be characterized, and the effect of Marine Protected Areas (MPAs) on the fish and macroinvertebrate community fully ascertained.

Considered data-poor by local wildlife officials, commercially, recreationally and culturally important Amphistichus rhodoterus (redtail surfperch) and common Hyperprosopon ellipticum (silver surfperch) utilize the sandy beach surf zone in Northern California. Little is known about the effect of various environmental factors, …

Resolving Variability In Size Structure In An Individual-Based Model For The North Pacific Krill, Euphausia Pacifica, Roxanne Robertson

Cal Poly Humboldt theses and projects

Individual-based models (IBMs) have emerged as a powerful tool for ecological research and are particularly well suited to studies of plankton ecology. In this thesis, I develop an IBM for the North Pacific krill, Euphausia pacifica, with the goal of replicating observed variability in size-structure in the northern California Current Ecosystem. Krill, and E. pacifica in particular, are central to the structure and function of the California Current Ecosystem. Their response to environmental forcing translates climate variability to higher trophic levels and underpins broader ecosystem responses. Recent observations indicate environmental and climate-related shifts in E. pacifica size distributions, which …

Characterizing Habitat Preference In Three Nearshore Reef-Associated Fishes Through Collaborative Research, Public Data, And Open Source Software, Ian D. Kelmartin

Cal Poly Humboldt theses and projects

Black rockfish (Sebastes melanops), canary rockfish (S. pinniger), and lingcod (Ophidion elongatus) are important species in Northern California’s nearshore recreational and commercial fisheries. These species are associated with nearshore rocky reefs and are among a suite of species intended to benefit from the establishment of the marine protected area (MPA) network along the Northern California Coast in 2012.

Many aspects of the North Coast’s nearshore ecosystem remain poorly studied, including the spatial distribution and habitat associations of nearshore fish species. This study used data collected from Cape Mendocino State Marine Reserve (SMR), Ten Mile …

Multiscale Habitat Suitability Modeling For Canary Rockfish (Sebastes Pinniger) Along The Northern California Coast, Portia N. Saucedo

Cal Poly Humboldt theses and projects

Detailed spatially-explicit data of the potential habitat of commercially important rockfish species are a critical component for the purposes of marine conservation, evaluation, and planning. Predictive habitat modeling techniques are widely used to identify suitable habitat in un-surveyed regions. This study elucidates the predicted distribution of canary rockfish (Sebastes pinniger) along the largely un-surveyed northern California coast using data from visual underwater surveys and predictive terrain complexity covariates. I used Maximum Entropy (MaxEnt) modelling software to identify regions of suitable habitat for S. pinniger greater than nine cm in total length at two spatial scales. The results of …

Population Characteristics And Trophic Interactions Between Pacific Mole Crabs And Redtail Surfperch On Northern California Sandy Beaches, Michelle Lynn Succow

Cal Poly Humboldt theses and projects

A network of marine protected areas (MPAs) was established to protect northern California coastal habitats in December 2012. Populations of two indicator species, Amphistichus rhodoterus (redtail surfperch) and Emerita analoga (pacific mole crabs) were characterized within MPAs and reference sites to provide baseline ecological information for this region. Data were gathered using a series of simple field surveys (hook and line fishing surveys for A. rhodoterus along with core and transect surveys for E. analoga). Relative abundance, lengths, and sex ratios of A. rhodoterus did not differ between MPAs and their respective reference sites, whereas condition (overall health) increased …