Open Access. Powered by Scholars. Published by Universities.®
Articles 1 - 2 of 2
Full-Text Articles in Computational Biology
Genomics Rna-Seq Analysis Part 2_ Kallisto Indexing And Quantification (Updated 11/17), Ray A. Enke, Melika Rahmani-Mofrad
Genomics Rna-Seq Analysis Part 2_ Kallisto Indexing And Quantification (Updated 11/17), Ray A. Enke, Melika Rahmani-Mofrad
Ray Enke Ph.D.
This in class exercise is a hands on activity designed to teach students about how to run Kallisto indexing quantification using CyVerse DE apps as part of a eukaryotic RNA-seq analysis pipeline.
Genomics Rna-Seq Analysis Part 3-Sleuth Data Visualization (Updated 11/17), Ray A. Enke, Scott Schumacker
Genomics Rna-Seq Analysis Part 3-Sleuth Data Visualization (Updated 11/17), Ray A. Enke, Scott Schumacker
Ray Enke Ph.D.
This in class exercise is a hands on activity designed to teach students about how to run Sleuth statistical modeling and RStudio data visualization package using Kallisto pseudoalignment output files as part of a eukaryotic RNA-seq analysis pipeline.