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Genetics and Genomics Commons

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Articles 1 - 5 of 5

Full-Text Articles in Genetics and Genomics

Genomic Sequencing Data Analysis Workflow For Bioinformatics Core Facilities, Selen A. Yilmaz, Jie Zhang, Gulcin Ozer Nov 2014

Genomic Sequencing Data Analysis Workflow For Bioinformatics Core Facilities, Selen A. Yilmaz, Jie Zhang, Gulcin Ozer

Learning Showcase 2014

Next Generation Sequencing (NGS) is becoming a common tool in the practice of biomedical research and the future of how medicine will be practiced. To keep up with the explosion in new NGS experiments and the growing need in data analysis, we identified bottlenecks of our NGS data analysis workflow, evaluated and tested feasibility of solutions. To address main bottlenecks we incorporated two solutions into our

workflow: (1) Globus Genomics, a well-maintained cloud based sequencing data analysis framework which leverage advanced tools and data management, and (2) GenomAnalytics from GenomOncology, an interactive platform for data integration, annotation, filtering an interpretation. …


An Exploration Of Fern Genome Space, Paul G. Wolf, Emily B. Sessa, D. Blaine Marchant, Fay-Wei Li, Carl J. Rothfels, Erin M. Sigel, Mathew A. Gitzendanner, Clayton J. Visger, Jo Ann Banks, Douglas E. Soltis, Pamela S. Soltis, Kathleen M. Pryer, Joshua P. Der Jul 2014

An Exploration Of Fern Genome Space, Paul G. Wolf, Emily B. Sessa, D. Blaine Marchant, Fay-Wei Li, Carl J. Rothfels, Erin M. Sigel, Mathew A. Gitzendanner, Clayton J. Visger, Jo Ann Banks, Douglas E. Soltis, Pamela S. Soltis, Kathleen M. Pryer, Joshua P. Der

An Exploration of Fern Genome Space

Ferns are one of the few remaining major clades of land plants for which a complete genome sequence is lacking. Knowledge of genome space in ferns will enable broad-scale comparative analyses of land plant genes and genomes, provide insights into genome evolution across green plants, and shed light on genetic and genomic features that characterize ferns, such as their high chromosome numbers and large genome sizes. As part of an initial exploration into fern genome space, we used a whole genome shotgun sequencing approach to obtain low-density coverage (1X to 2X) for six fern species from the Polypodiales (Ceratopteris …


The Search, The Jackson Laboratory Jul 2014

The Search, The Jackson Laboratory

Search Magazine

No abstract provided.


Ribosome-Binding And Activity Of Release Factor 2 In The Presence Of L-Tryptophan, Nuzhat Majid Jan 2014

Ribosome-Binding And Activity Of Release Factor 2 In The Presence Of L-Tryptophan, Nuzhat Majid

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.


Crispr-Cas Gene Engineering And The Characterization Of Cis-Regulatory Elements (Cres) In The Non-Coding Genome, Garrett Wilson Jan 2014

Crispr-Cas Gene Engineering And The Characterization Of Cis-Regulatory Elements (Cres) In The Non-Coding Genome, Garrett Wilson

Summer Community of Scholars Posters (RCEU and HCR Combined Programs)

No abstract provided.