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Genetics and Genomics Commons

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University of Nebraska - Lincoln

Individual-based model

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Full-Text Articles in Genetics and Genomics

Estimation Of Genetically Effective Breeding Numbers Using A Rejection Algorithm Approach, Uma Ramakrishnan, Jay F. Storz, Barbara L. Taylor, Russell Lande Nov 2004

Estimation Of Genetically Effective Breeding Numbers Using A Rejection Algorithm Approach, Uma Ramakrishnan, Jay F. Storz, Barbara L. Taylor, Russell Lande

Jay F. Storz Publications

Polygynous mating results in nonrandom sampling of the adult male gamete pool in each generation, thereby increasing the rate of genetic drift. In principle, genetic paternity analysis can be used to infer the effective number of breeding males (Nebm). However, this requires genetic data from an exhaustive sample of candidate males. Here we describe a new approach to estimate Nebm using a rejection algorithm in association with three statistics: Euclidean distance between the frequency distributions of maternally and paternally inherited alleles, average number of paternally inherited alleles and average gene diversity of paternally inherited alleles. We quantify …


Genetic Effective Size Of A Wild Primate Population: Influence Of Current And Historical Demography, Jay F. Storz, Uma Ramakrishnan, Susan C. Alberts Sep 2002

Genetic Effective Size Of A Wild Primate Population: Influence Of Current And Historical Demography, Jay F. Storz, Uma Ramakrishnan, Susan C. Alberts

Jay F. Storz Publications

A comprehensive assessment of the determinants of effective population size (Ne) requires estimates of variance in lifetime reproductive success and past changes in census numbers. For natural populations, such information can be best obtained by combining longitudinal data on individual life histories and genetic marker-based inferences of demographic history. Independent estimates of the variance effective size (NeV, obtained from life-history data) and the inbreeding effective size (NeI, obtained from genetic data) provide a means of disentangling the effects of current and historical demography. The purpose of this study was to assess …