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Ecology and Evolutionary Biology Commons™
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Articles 1 - 18 of 18
Full-Text Articles in Ecology and Evolutionary Biology
Lake Water Chemistry And Local Adaptation Shape Nacl Toxicity In Daphnia Ambigua, Mary Alta Rogalski, Elizabeth S. Baker, Clara M. Benadon
Lake Water Chemistry And Local Adaptation Shape Nacl Toxicity In Daphnia Ambigua, Mary Alta Rogalski, Elizabeth S. Baker, Clara M. Benadon
Biology Faculty Publications
Increasing application of road deicing agents (e.g., NaCl) has caused widespread salinization of freshwater environments. Chronic exposure to toxic NaCl levels can impact freshwater biota at genome to ecosystem scales, yet the degree of harm caused by road salt pollution is likely to vary among habitats and populations. The background ion chemistry of freshwater environments may strongly impact NaCl toxicity, with greater harm occurring in ion-poor, soft water conditions. In addition, populations exposed to salinization may evolve increased NaCl tolerance. Notably, if organisms are adapted to their natal lake water chemistry, toxicity responses may also vary among populations in a …
Long‑Term Adaptation To Galactose As A Sole Carbon Source Selects For Mutations Outside The Canonical Gal Pathway, Artemiza A. Martínez, Andrew Conboy, Sean Buskirk, Daniel A. Marad, Gregory I. Lang
Long‑Term Adaptation To Galactose As A Sole Carbon Source Selects For Mutations Outside The Canonical Gal Pathway, Artemiza A. Martínez, Andrew Conboy, Sean Buskirk, Daniel A. Marad, Gregory I. Lang
Biology Faculty Publications
Galactose is a secondary fermentable sugar that requires specific regulatory and structural genes for its assimilation, which are under catabolite repression by glucose. When glucose is absent, the catabolic repression is attenuated, and the structural GAL genes are fully activated. In Saccharomyces cerevisiae, the GAL pathway is under selection in environments where galactose is present. However, it is unclear the adaptive strategies in response to long-term propagation in galactose as a sole carbon source in laboratory evolution experiments. Here, we performed a 4,000-generation evolution experiment using 48 diploid Saccharomyces cerevisiae populations to study adaptation in galactose. We show that fitness …
Phylogenomic Discordance Suggests Polytomies Along The Backbone Of The Large Genus Solanum, Angela Mcdonnell, Edeline Gagnon, Rebecca Hilgenhof, Andres Orejuela, Gaurav Sablok, Xavier Aubriot, Leandro Giacomin, Yuri Gouvea, Thamyris Bragionis, Joao Renato Stehmann, Lynn Bohs, Steven Dodsworth, Christopher Martine, Peter Poczai, Sandra Knapp, Tiina Sarkinen
Phylogenomic Discordance Suggests Polytomies Along The Backbone Of The Large Genus Solanum, Angela Mcdonnell, Edeline Gagnon, Rebecca Hilgenhof, Andres Orejuela, Gaurav Sablok, Xavier Aubriot, Leandro Giacomin, Yuri Gouvea, Thamyris Bragionis, Joao Renato Stehmann, Lynn Bohs, Steven Dodsworth, Christopher Martine, Peter Poczai, Sandra Knapp, Tiina Sarkinen
Biology Faculty Publications
Premise
Evolutionary studies require solid phylogenetic frameworks, but increased volumes of phylogenomic data have revealed incongruent topologies among gene trees in many organisms both between and within genomes. Some of these incongruences indicate polytomies that may remain impossible to resolve. Here we investigate the degree of gene-tree discordance in Solanum, one of the largest flowering plant genera that includes the cultivated potato, tomato, and eggplant, as well as 24 minor crop plants.
Methods
A densely sampled species-level phylogeny of Solanum is built using unpublished and publicly available Sanger sequences comprising 60% of all accepted species (742 spp.) and nine regions …
Multiple Connections Between Amazonia And Atlantic Forest Shaped The T Phylogenetic And Morphological Diversity Of Chiasmocleis Mehely, 1904 (Anura: Microhylidae: Gastrophryninae), Rafael O. De Sá, João Filipe Riva Tonini, Hannah Van Huss, Alex Long, Travis Cuddy, Mauricio C. Forlani, Pedro L.V. Peloso, Hussam Zaher, Célio F.B. Haddad
Multiple Connections Between Amazonia And Atlantic Forest Shaped The T Phylogenetic And Morphological Diversity Of Chiasmocleis Mehely, 1904 (Anura: Microhylidae: Gastrophryninae), Rafael O. De Sá, João Filipe Riva Tonini, Hannah Van Huss, Alex Long, Travis Cuddy, Mauricio C. Forlani, Pedro L.V. Peloso, Hussam Zaher, Célio F.B. Haddad
Biology Faculty Publications
Chiasmocleis is the most species-rich genus of Neotropical microhylids. Herein, we provide the first comprehensive multilocus phylogeny for the genus, including all but 3 of the 34 recognized species and multiple individuals per species. We discuss cryptic speciation, species discovery, patterns of morphological evolution, and provide a historical biogeographic analysis to account for the current distribution of the genus. Diversification of Chiasmocleis from other New World microhylids began during the Eocene, app. 40 mya, in forested areas, and current diversity seems to be a product of recurrent connections between the Atlantic Forest and Amazonia. Small-sized species evolved independently three times …
Review Of The Family Rivulidae (Cyprinodontiformes, Aplocheiloidei) And A Molecular And Morphological Phylogeny Of The Annual Fish Genus Austrolebias Costa 1998, Marcelo Loureiro, Rafael O. De Sá, Sebastián W. Serra, Felipe Alonso, Luis Esteban Krause Lanés, Matheus Vieira Volcan, Pablo Calviño, Dalton Nielsen, Alejandro Duarte, Graciela Garcia
Review Of The Family Rivulidae (Cyprinodontiformes, Aplocheiloidei) And A Molecular And Morphological Phylogeny Of The Annual Fish Genus Austrolebias Costa 1998, Marcelo Loureiro, Rafael O. De Sá, Sebastián W. Serra, Felipe Alonso, Luis Esteban Krause Lanés, Matheus Vieira Volcan, Pablo Calviño, Dalton Nielsen, Alejandro Duarte, Graciela Garcia
Biology Faculty Publications
The family Rivulidae is the fourth most diverse clade of Neotropical fishes. Together with some genera of the related African family Nothobranchiidae, many rivulids exhibit a characteristic annual life cycle, with diapausing eggs and delayed embryonic development, which allows them to survive in the challenging seasonal ponds that they inhabit. Rivulidae also includes two species known as the only the self-fertilizing vertebrates and some species with internal fertilization. The first goal of this article is to review the systematics of the family considering phylogenetic relationships and synapomorphies of subfamilial clades, thus unifying information that is dispersed throughout the literature. From …
The Evolutionary History Of Nebraska Deer Mice: Local Adaptation In The Face Of Strong Gene Flow, Susanne P Pfeifer, Stefan Laurent, Vitor C. Sousa, Catherine R. Linnen, Matthieu Foll, Laurent Excoffier, Hopi E. Hoekstra, Jeffrey D. Jensen
The Evolutionary History Of Nebraska Deer Mice: Local Adaptation In The Face Of Strong Gene Flow, Susanne P Pfeifer, Stefan Laurent, Vitor C. Sousa, Catherine R. Linnen, Matthieu Foll, Laurent Excoffier, Hopi E. Hoekstra, Jeffrey D. Jensen
Biology Faculty Publications
The interplay of gene flow, genetic drift, and local selective pressure is a dynamic process that has been well studied from a theoretical perspective over the last century. Wright and Haldane laid the foundation for expectations under an island-continent model, demonstrating that an island-specific beneficial allele may be maintained locally if the selection coefficient is larger than the rate of migration of the ancestral allele from the continent. Subsequent extensions of this model have provided considerably more insight. Yet, connecting theoretical results with empirical data has proven challenging, owing to a lack of information on the relationship between genotype, phenotype, …
Current Status Of American Bullfrog, Lithobates Catesbeianus, Invasion In Uruguay And Exploration Of Chytrid Infection, Gabriel Laufer, Noelia Gobel, Claudio Borteiro, Alvaro Soutullo, Claudio Martinez-Debat, Rafael O. De Sá
Current Status Of American Bullfrog, Lithobates Catesbeianus, Invasion In Uruguay And Exploration Of Chytrid Infection, Gabriel Laufer, Noelia Gobel, Claudio Borteiro, Alvaro Soutullo, Claudio Martinez-Debat, Rafael O. De Sá
Biology Faculty Publications
The American bullfrog Lithobates catesbeianus is an invasive species that can strongly affect native amphibian communities through competition, predation, or introduction of diseases. This frog has invaded multiple areas in South America, for which niche models predict suitable environments across much of the continent. This paper reveals the state of the invasion of this species in Uruguay and its possible relationship with the chytrid pathogenic fungus, Batrachochytrium dendrobatidis. Surveys at invaded sites were conducted from 2007 to 2015, identified two populations undergoing recent range expansion (one of them exponential), two populations that failed to establish, and a new record …
A Global Community Effort To Decipher The Unique Biology Of Annual Killifish, Nibia Berois, Graciela Garcia, Rafael O. De Sá
A Global Community Effort To Decipher The Unique Biology Of Annual Killifish, Nibia Berois, Graciela Garcia, Rafael O. De Sá
Biology Faculty Publications
Over the past 50 years, annual killifishes arose as alternative model organisms for studies of vertebrate biology. The annual fish offers exceptional advantages for studies of genetics, genomics, developmental biology, population dynamics, ecology, biogeography, and evolution. They inhabit extremely variable freshwater environments in Africa and South America, have a short lifespan and a set of unique and fascinating developmental characteristics. Embryos survive within the dry substrate during the dry season, whereas the adult population dies. Thus, the survival of the populations is entirely dependent on the buried embryos that hatch the next rainy season. Although Old and New World species …
Gregariousness Does Not Vary With Geography, Developmental Stage, Or Group Relatedness In Feeding Redheaded Pine Sawfly Larvae, John W. Terbot Ii, Ryan L. Gaynor, Catherine R. Linnen
Gregariousness Does Not Vary With Geography, Developmental Stage, Or Group Relatedness In Feeding Redheaded Pine Sawfly Larvae, John W. Terbot Ii, Ryan L. Gaynor, Catherine R. Linnen
Biology Faculty Publications
Aggregations are widespread across the animal kingdom, yet the underlying proximate and ultimate causes are still largely unknown. An ideal system to investigate this simple, social behavior is the pine sawfly genus Neodiprion, which is experimentally tractable and exhibits interspecific variation in larval gregariousness. To assess intraspecific variation in this trait, we characterized aggregative tendency within a single widespread species, the redheaded pine sawfly (N. lecontei). To do so, we developed a quantitative assay in which we measured interindividual distances over a 90-min video. This assay revealed minimal behavioral differences: (1) between early-feeding and late-feeding larval instars, …
Constraints On The Evolution Of Phenotypic Plasticity: Limits And Costs Of Phenotype And Plasticity, C. J. Murren, Josh R. Auld, H. Callahan, C. K. Ghalambor, C. A. Handelsman, M. A. Heskel, J. G. Kingsolver, H. J. Maclean, J. Masel, H. Maughan, D. W. Pfennig, R. A. Relyea, S. Seiter, E. Snell-Rood, U. K. Steiner, C. D. Schlichting
Constraints On The Evolution Of Phenotypic Plasticity: Limits And Costs Of Phenotype And Plasticity, C. J. Murren, Josh R. Auld, H. Callahan, C. K. Ghalambor, C. A. Handelsman, M. A. Heskel, J. G. Kingsolver, H. J. Maclean, J. Masel, H. Maughan, D. W. Pfennig, R. A. Relyea, S. Seiter, E. Snell-Rood, U. K. Steiner, C. D. Schlichting
Biology Faculty Publications
No abstract provided.
Evolutionary Change In Continuous Reaction Norms, Courtney J. Murren, Heidi J. Maclean, Sarah E. Diamond, Ulrich K. Steiner, Mary A. Heskel, Corey A. Handelsman, Cameron K. Ghalambor, Josh R. Auld, Hilary S. Callahan, David W. Pfennig, Rick A. Relyea, Carl D. Schlichting, Joel Kingsolver
Evolutionary Change In Continuous Reaction Norms, Courtney J. Murren, Heidi J. Maclean, Sarah E. Diamond, Ulrich K. Steiner, Mary A. Heskel, Corey A. Handelsman, Cameron K. Ghalambor, Josh R. Auld, Hilary S. Callahan, David W. Pfennig, Rick A. Relyea, Carl D. Schlichting, Joel Kingsolver
Biology Faculty Publications
No abstract provided.
Alternative Life Cycle Strategies And Colonization Of Young Anurans By Gorgoderina Attenuata In Nebraska, Matthew G. Bolek, Scott D. Snyder, John J. Janovy Jr.
Alternative Life Cycle Strategies And Colonization Of Young Anurans By Gorgoderina Attenuata In Nebraska, Matthew G. Bolek, Scott D. Snyder, John J. Janovy Jr.
Biology Faculty Publications
Studies on life cycles and epizootiology of North American frog bladder flukes indicate that adult frogs become infected predominantly by ingesting tadpoles or other frogs that serve as second intermediate hosts for gorgoderid metacercariae. Other studies have indicated that newly metamorphosed frogs are rarely infected with these parasites because they are gape-limited predators that cannot feed on large intermediate hosts such as tadpoles and other frogs. We examined the role of potential intermediate hosts in the recruitment of the frog bladder fluke, Gorgoderina attenuata, to metamorphosed northern leopard frogs, Woodhouse’s toads, and bullfrogs from western Nebraska. We completed the …
Ambystoma Maculatum (Spotted Salamander) Occurrence, Kristine L. Grayson, A. M. Bloch
Ambystoma Maculatum (Spotted Salamander) Occurrence, Kristine L. Grayson, A. M. Bloch
Biology Faculty Publications
Natural History Notes: Ambystoma maculatum is a wide ranging mole salamander found from Nova Scotia and southern Ontario through Georgia and eastern Texas (Conant and Collins 1998).
Predator- And Competitor-Induced Plasticity: How Changes In Foraging Morphology Affect Phenotypic Trade-Offs, Rick A. Relyea, Josh R. Auld
Predator- And Competitor-Induced Plasticity: How Changes In Foraging Morphology Affect Phenotypic Trade-Offs, Rick A. Relyea, Josh R. Auld
Biology Faculty Publications
No abstract provided.
Are Leptodactylus Didymus And L. Mystaceus Phylogenetically Sibling Species (Amphibia, Anura, Leptodactylidae)?, Rafael O. De Sá, W. R. Heyer, A. Camargo
Are Leptodactylus Didymus And L. Mystaceus Phylogenetically Sibling Species (Amphibia, Anura, Leptodactylidae)?, Rafael O. De Sá, W. R. Heyer, A. Camargo
Biology Faculty Publications
The Leptodactylus fuscus species group consists of 25 currently recognized species; within this species group and distributed throughout the Amazon Basin, Atlantic Forests, Gran Chaco, and cerrados is the L. mystaceus species complex. This species complex consists of L. didymus, L. elenae, L. mystaceus, L. notoaktites, and L. spixi. Adult morphologies have been used to distinguish these species from each other except for L. didymus and L. mystaceus (Heyer, 1978; Heyer et al., 1996). Leptodactylus didymus and L. mystaceus are morphologically indistinguishable; the species are recognizable only by the characteristics of their advertisement calls: non-pulsed in L. didymus and pulsed …
Do Timing And Pattern Of Myogenesis Correlate With Life History Mode In Anurans?, Matthew T. Smetanick, Rafael O. De Sá, Gary P. Radice
Do Timing And Pattern Of Myogenesis Correlate With Life History Mode In Anurans?, Matthew T. Smetanick, Rafael O. De Sá, Gary P. Radice
Biology Faculty Publications
The timing and pattern of myogensis varies among anurans that have been studied and the different patterns may provide useful phylogenetic information. Specific myogenic markers have been described (Muntz, 1975; Kielbowna, 1981; Boudjelida & Muntz, 1987; Radice et al., l989) and they can provide information on evolutionary changes for closely related lineages within a clade. For example, we previously compared first appearance of a muscle-specific protein, first twitch of axial muscle, onset of multinucleation within axial myotome, and first heartbeat in two pipid genera (Smetanick, et al., 1999). We found that although the timing of myogensis differed, the sequence of …
Phylogenetic Reanalysis Of Strauch's Osteological Data Set For The Charadriiformes, Philip C. Chu
Phylogenetic Reanalysis Of Strauch's Osteological Data Set For The Charadriiformes, Philip C. Chu
Biology Faculty Publications
Strauch's (1978) compatibility analysis of relationships among the shorebirds (Charadriiformes) was the first study to examine the full range of charadriiform taxa in a reproducible way. Subsequently Mickevich and Parenti (1980) leveled serious charges against Strauch's characters, method of phylogenetic inference, and results. To account for these charges, Strauch's characters were re-examined and recoded, and parsimony analyses were performed on the revised matrix. A parsimony analysis on 74 taxa from the revised matrix yielded 855 shortest trees, each length = 286 and consistency index = 0.385. In each shortest tree there were two major lineages, a lineage of sandpiper-like birds …
Xenopus Laevis As A Model Organism, David C. Cannatella, Rafael O. De Sá
Xenopus Laevis As A Model Organism, David C. Cannatella, Rafael O. De Sá
Biology Faculty Publications
Model organisms are often assumed to be representative of some more inclusive taxon of which the species is a part. This assumption leads to mistaken generalizations about the evolutionary and comparative significance of the data gathered. This paper reviews com? parative and evolutionary studies of Xenopus laevis and its relatives. Phylogenetic analysis of data from DNA sequences and morphology indicate that Xenopus is monophyletic and that Silurana is its sister group. The most basal lineages of Pipidae diverged prior to the breakup of Gondwana. The bizarre morphology of Xenopus is in part due to changes in the mode of meta? …