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Articles 1 - 27 of 27
Full-Text Articles in Ecology and Evolutionary Biology
Methods For Drone Trajectory Analysis Of Bottlenose Dolphins (Tursiops Truncatus), Jillian D. Bliss
Methods For Drone Trajectory Analysis Of Bottlenose Dolphins (Tursiops Truncatus), Jillian D. Bliss
Theses and Dissertations
With the increase in the use of UAS (Unmanned Aerial Systems) for marine mammal research, there is a need for the development of methods of analysis to transform UAS high resolution video into quantitative data. This study sought to develop a preliminary method of analysis that would quantify and present a way to visualize the dynamics and relative spatial distribution and changes in distribution of bottlenose dolphins (Tursiops truncatus) in the waters of Turneffe Atoll, Belize. This approach employs a previously developed video tracking program ‘Keypoint Tracking’ that enables manual tracking of individual dolphins and the creation of …
Assessing The Legacy Of Erosion And Flood Control Management Efforts On The Fish Assemblages And Physical Conditions Of Yazoo Basin Bluff Hill Streams, Nicky M. Faucheux
Assessing The Legacy Of Erosion And Flood Control Management Efforts On The Fish Assemblages And Physical Conditions Of Yazoo Basin Bluff Hill Streams, Nicky M. Faucheux
Theses and Dissertations
The hills of Yazoo Basin have a long history of land use modification and subsequent erosion and flood control issues. In response, federal actions were taken to address these issues beginning after the Mississippi River flood of 1927. Four major flood control reservoirs were built in 1932-1957, and instream low-drop grade control structures (GCS) were installed beginning in the 1980s. The objective of my dissertation was to ascertain the long-term effects of these efforts on stream fish assemblages and channel morphology. To assess whether the reservoirs affected upstream fish assemblages as barriers to recolonization by fluvial fishes or as source …
Animal Husbandry In The 21st Century: Application Of Ecological Theory And Precision Technology To Inform Understanding Of Modern Grazing Systems, Ira Lloyd Parsons
Animal Husbandry In The 21st Century: Application Of Ecological Theory And Precision Technology To Inform Understanding Of Modern Grazing Systems, Ira Lloyd Parsons
Theses and Dissertations
Ruminant animals comprise the greatest proportion of herbivores around the world, provide essential ecosystem services and human consumable protein by consuming grass and human inedible dietary fiber. Herbivory pressure alters plant communities and species diversity, effectively making grazing animals ecosystem engineers in dynamic ecosystems. Development of advanced computer processing power coupled with biometric and ecosystem sensors may be employed in the internet of things framework to create an integrated information system designed to inform understanding of grazing system function and animal energy balance. Towards this end, I utilized Bos indicus / Bos taurus crossbred steers (n = 20) across two …
Towards Structured Planning And Learning At The State Fisheries Agency Scale, Caleb A. Aldridge
Towards Structured Planning And Learning At The State Fisheries Agency Scale, Caleb A. Aldridge
Theses and Dissertations
Inland recreational fisheries has grown philosophically and scientifically to consider economic and sociopolitical aspects (non-biological) in addition to the biological. However, integrating biological and non-biological aspects of inland fisheries has been challenging. Thus, an opportunity exists to develop approaches and tools which operationalize planning and decision-making processes which include biological and non-biological aspects of a fishery. This dissertation expands the idea that a core set of goals and objectives is shared among and within inland fisheries agencies; that many routine operations of inland fisheries managers can be regimented or standardized; and the novel concept that current information and operations can …
Vegetation And Nutritional Changes Over 20 Years Of White-Tailed Deer Exclusion, Gabrielle Nicole Ripa
Vegetation And Nutritional Changes Over 20 Years Of White-Tailed Deer Exclusion, Gabrielle Nicole Ripa
Theses and Dissertations
Knowledge of the impacts of white-tailed deer (Odocoileus virginianus; hereafter deer) as dominant herbivores throughout the Southeastern United States of America is lacking. To address this, three paired experimental units of exclosures and controls were constructed in 2000 on three Wildlife Management Areas across Mississippi within the ecoregions of the Upper Coastal Plain, Lower Coastal Plain, and the Mississippi Alluvial Valley. Vegetation was sampled in the summers of 2000, 2005, and 2021 including vegetation structure, canopy coverage, basal area, and species composition. Additionally, in 2005 and 2021, biomass was sampled to determine potential impacts on nutritional carrying capacity. Among the …
Microbial Ecology Of Urban Sewers, Emily Lou Lamartina
Microbial Ecology Of Urban Sewers, Emily Lou Lamartina
Theses and Dissertations
Municipal sewage provides a glimpse into the health and activities of a human society. For more than a century, sewage exploration has helped expose the sources of disease outbreaks and track disease progression over time. Recent advancements in wastewater surveillance born from the COVID-19 pandemic have potential to enhance mitigation efforts against the decades-long global health crisis of microbial antibiotic resistance. However, critical knowledge gaps exist in wastewater surveillance, stemming from a lack of understanding in sewer microbial ecology. Ecology reveals trends in how communities respond and adapt to change, which has far-reaching implications for identifying effective strategies for disease …
Effects Of Mass Death On Community Structure And Ecosystem Function, Abby Kimpton Jones
Effects Of Mass Death On Community Structure And Ecosystem Function, Abby Kimpton Jones
Theses and Dissertations
Death and decomposition are natural processes that are generally well-understood. However, large events of death, such as mass mortality events (MMEs) are increasing in frequency and their impacts on the ecosystem are largely unknown. These events may have both bottom-up effects from increased nutrient input as well as top-down effects from loss of an ecological functional group by the affected population. Different functional MMEs may result in different top-down effects, creating cascading effects. In Chapter 1, I test the hypothesis that scavenger and herbivore simulated MMEs generate novel bottom-up and top-down effects. Results indicate that MMEs have a significant effect …
Evaluating Non-Invasive Environmental Methods For Detecting Tropical African Pangolin Species To Inform Conservation Actions, Ichu Godwill Ichu
Evaluating Non-Invasive Environmental Methods For Detecting Tropical African Pangolin Species To Inform Conservation Actions, Ichu Godwill Ichu
Theses and Dissertations
Tropical African pangolin species are threatened throughout their range due to habitat loss and illegal take. Limited knowledge on distribution has rendered conservation efforts challenging. Methods commonly used for other wildlife species need to be tested for each pangolin species as each has variable ecologies requiring specific detection and monitoring techniques. This thesis evaluates the efficacy of two non-invasive environmental methods for detecting tropical African pangolin species, and consists of two complementary studies; a proof of concept study using soil sourced eDNA from a white-bellied pangolin enclosure in the Columbus Zoo, Ohio, to detect the species, and a field study …
Examination Of Amphibian Community And Environmental Relationships In South Texas Using Environmental Dna (Edna), Sean Michael Collins
Examination Of Amphibian Community And Environmental Relationships In South Texas Using Environmental Dna (Edna), Sean Michael Collins
Theses and Dissertations
Developing more efficient tools to assess amphibian biodiversity and understanding what environmental variables drive amphibian biodiversity are top priorities, as amphibians are facing extinction events across the globe. Environmental DNA (eDNA) surveys are a promising new tool to asses amphibian biodiversity. Throughout the study eDNA metabarcoding along with a targeted eDNA assay and traditional survey methods were used to provide foundational information on amphibian community assemblages throughout South Texas. Water quality, habitat characteristics and soil composition data were collected and used to examine environmental relationships. eDNA metabarcoding detected significantly more amphibian taxonomic units compared to traditional survey …
The Role Of Nest Location On The Reproductive Success Of Piping Plovers Breeding At Rockaway Beach, New York, Clara I.D. Arndtsen
The Role Of Nest Location On The Reproductive Success Of Piping Plovers Breeding At Rockaway Beach, New York, Clara I.D. Arndtsen
Theses and Dissertations
The study’s goal was to learn what aspects of the piping plover experience affect reproductive outcomes at Rockaway Beach Endangered Species Nesting Area. Nest location was found to help predict reproductive success. Nests further from American oystercatcher nests were likely to fledge more chicks. Reproductive success was low in 2021.
Nesting Ecology Of Wood Ducks And Other Cavity-Nesting Ducks In Mississippi, Justin Taylor Gibson
Nesting Ecology Of Wood Ducks And Other Cavity-Nesting Ducks In Mississippi, Justin Taylor Gibson
Theses and Dissertations
Man-made nest boxes are surrogate nest sites widely used by waterfowl managers in North America to propagate free-ranging Wood Ducks (Aix sponsa) and other cavity-nesting waterfowl. I monitored 129 and 174 nest boxes in 2020 and 2021, respectively, at Noxubee National Wildlife Refuge and York Woods, Mississippi. I evaluated site-specific biotic and abiotic factors that were potentially influential on nest survival of Wood Ducks and general nesting ecology and apparent nest success of Black-bellied Whistling Ducks (Dendrocygna autumnalis) and Hooded Mergansers (Lophodytes cucullatus). Daily survival rate of Wood Ducks was negatively influenced by increasing encroaching vegetation at Noxubee NWR and …
Evaluating The Role Of Area, Isolation, And Human Behavior On Meso-Mammals In A Small Statistical Demographic Area, Brittney Palode
Evaluating The Role Of Area, Isolation, And Human Behavior On Meso-Mammals In A Small Statistical Demographic Area, Brittney Palode
Theses and Dissertations
Urbanization offers unique challenges for wildlife. The urban landscape is fragmented and changes available resources for wildlife. Human-dominated landscapes can provide food, shelter, or cover through human-subsidized resources. However, to thrive in human-dominated landscapes, wildlife must adapt or disperse, otherwise they will die. In this study, I investigated how the urban landscape and human behavior influence urban wildlife occurrence. I established 35 camera sites during April 2020. I surveyed residential property dwellers around each camera site to determine what behavior they performed that could increase species occurrence. Gray fox and coyote site use decreased with increased isolation while no species …
The Effects Of Short-Term Sea Level Rise On Vegetation Communities In Coastal Mississippi, Brianna Michelle Andrews
The Effects Of Short-Term Sea Level Rise On Vegetation Communities In Coastal Mississippi, Brianna Michelle Andrews
Theses and Dissertations
Salt marshes are important habitats that provide many ecosystem services, but they are susceptible to the impacts of sea level rise (SLR), often resulting in emergent vegetation loss. In areas with enough sediment input, marshes can keep pace with SLR by gaining elevation or through upland migration. However, salt marshes in areas with limited sediment input, such as the Grand Bay National Estuarine Research Reserve, often cannot keep pace with sea level rise. Additionally, the rate of SLR is increasing making it more difficult for marshes to keep pace. To assess the short-term response of marsh vegetation to sea level …
Migration Ecology Of American White Pelicans: Circannual Movement, Geographic Range, And Annual Survival, Ryo Ogawa
Theses and Dissertations
Responses of migratory birds to seasonal climate and long-term environmental changes have been a central theme of avian migration ecology. Atmospheric conditions (e.g., winds and thermals), climate, and land cover and land use (LCLU) are major factors influencing the flights of soaring birds. Soaring American White Pelicans (Pelecanus erythrorhynchos) (hereafter, AWPEs) migrate between the subtropical Gulf of Mexico (GOM) and the temperate Northern Great Plains. American White Pelicans are also economically important piscivorous birds, causing enormous damages to the commercial Channel Catfish (Ictalurus punctatus) aquaculture in the Southeastern US. My studies aimed to evaluate the effects …
Assessing Priority Bird Response To Open Pine Management In Eastern Mississippi, Holly Marie Todaro
Assessing Priority Bird Response To Open Pine Management In Eastern Mississippi, Holly Marie Todaro
Theses and Dissertations
Fire suppression, combined with lack of forest thinning and short-rotation, monodominant management, has drastically altered the landscape in the southeastern U.S., leading to the loss of open pine ecosystems and associated avian species. Management of open pine ecosystems is a common practice; yet, there remains uncertainty regarding how vegetation structure impacts priority species. Using empirical data, I assessed changes in species abundance and associated vegetation characteristics before and after management. I also sought to identify vegetation characteristics that influence home range establishment and microhabitat selection of Bachman’s Sparrows. Priority species were negatively associated with hardwood midstory and abundance per site …
Assessing The Utility Of The Pmm And Mmc Indices Among Extant Hominoid Genera, Julie A. Strain
Assessing The Utility Of The Pmm And Mmc Indices Among Extant Hominoid Genera, Julie A. Strain
Theses and Dissertations
This thesis set out to incorporate extant hominoid genera into an analysis of PMM and MMC to assess utility in phylogeny and predicting known taxonomic groups. Based on previous claims, we expect PMM/pmm and MMC/mmc to perform better than M1/m1 shape and size, our baseline for success, but they do not.
Spline Modeling And Localized Mutual Information Monitoring Of Pairwise Associations In Animal Movement, Andrew Benjamin Whetten
Spline Modeling And Localized Mutual Information Monitoring Of Pairwise Associations In Animal Movement, Andrew Benjamin Whetten
Theses and Dissertations
to a new era of remote sensing and geospatial analysis. In environmental science and conservation ecology, biotelemetric data recorded is often high-dimensional, spatially and/or temporally, and functional in nature, meaning that there is an underlying continuity to the biological process of interest. GPS-tracking of animal movement is commonly characterized by irregular time-recording of animal position, and the movement relationships between animals are prone to sudden change. In this dissertation, I propose a spline modeling approach for exploring interactions and time-dependent correlation between the movement of apex predators exhibiting territorial and territory-sharing behavior. A measure of localized mutual information (LMI) is …
Cognitive And Web Phenotypes Of The Western Black Widow Spider, Clint Michael Sergi
Cognitive And Web Phenotypes Of The Western Black Widow Spider, Clint Michael Sergi
Theses and Dissertations
Animals with brains create mental representations of their environment and their own position within it, and use these representations to make decisions. The information used to create mental representations, and how animals use representations to make decisions, are functions of an animal’s evolution and ecology. Mental representations can be as simple as remembering the direction and distance home, or as detailed as a human’s mental map of their own home. I used behavior assays designed to reveal the contents of mental representations to investigate how a web spider creates representation of its environment and objects within it, and uses these …
Architecture Of Mate Choice Decisions In Enchenopa Treehoppers, Bretta Speck
Architecture Of Mate Choice Decisions In Enchenopa Treehoppers, Bretta Speck
Theses and Dissertations
Mate selection is one of the most important choices a female can make for herself and her offspring. Variation in mate choice decisions has consequences for the maintenance of and the diversity within a population and the promotion of divergence between populations. Mate choice decisions arise from the interaction of two main components: “mate preferences” (the relative attractiveness of a potential mate) and “choosiness” (the effort put into procuring a preferred mate). My dissertation analyzes the relationship between the components involved in female mate choice decisions in Enchenopa binotata treehoppers. I take a three-pronged approach. First, I investigated how E. …
Holocene Human Influence In The Ecuadorean Amazon, Meghan Mary O'Connor
Holocene Human Influence In The Ecuadorean Amazon, Meghan Mary O'Connor
Theses and Dissertations
The extent to which the spectacular biodiversity of Amazonia has been shaped by Pre-Columbian humans is actively debated. Forests that today appear to be pristine wildernesses may have supported complex human societies as recently as 300 years ago. Understanding human history and the potential successional trajectories that result from site abandonment are important to conservation and policy-making. The Yasuni, is famed for its human and biological diversity and yet its pre-history is poorly known. Lake Añangucocha, a small blackwater lake in northwestern Ecuador, is unusual in that it is not a riverine lake, and has the potential to provide the …
Behavioral And Physiological Effects Of Heavy Metals On Fish: A Review And Preliminary Results, Diana V. Morales
Behavioral And Physiological Effects Of Heavy Metals On Fish: A Review And Preliminary Results, Diana V. Morales
Theses and Dissertations
Pollution, specifically heavy metal pollution, in various bodies of water has been a significant issue for decades. Research has been conducted on heavy metals and their effects on the environment, larger fish species, and humans since the 1970s (Skidmore, 1964; Adeniyi et al., 2007; Adeosun et al., 2015; Bawuro et al., 2018). It is known that zinc is a neurotoxin in some species and causes harm to the environment. It is also known that it causes harm to people if it is ingested or if they are exposed to it for long periods of time (Mahurpawar, 2015; Mizuno and Kawahara, …
Biotic Characteristics Of Managed And Unmanaged Coastal Dunes In The Outer Banks, North Carolina, Andrew E. White
Biotic Characteristics Of Managed And Unmanaged Coastal Dunes In The Outer Banks, North Carolina, Andrew E. White
Theses and Dissertations
Under future climate change and sea level rise scenarios, Natural and Nature-Based Features (e.g., dunes) that protect coastal habitat and infrastructure will be exposed to increased wave energy and storm surge. Understanding how these forces will impact coastal dunes is necessary for their continued use as protective features. Coastal dunes develop through feedback between vegetation and sediment deposition, a process complicated by species-specific growth rates and responses to burial. Wave flume studies have tested the effects of dune vegetation on erosion and found multiple plant organs across several functional types to be important for resisting erosion. Although dune building and …
Quantifying Contributions Of Climate, Geography, And Gene Flow To Divergence: A Case Study For Three North American Pines, Constance E. Bolte
Quantifying Contributions Of Climate, Geography, And Gene Flow To Divergence: A Case Study For Three North American Pines, Constance E. Bolte
Theses and Dissertations
Long-lived species of trees, especially conifers, often display weak patterns of reproductive isolation, but clear patterns of local adaptation and phenotypic divergence. Discovering the evolutionary history of these patterns is paramount to a generalized understanding of speciation and the processes that confer population persistence versus those that compromise adaptive potential under rapidly changing environments. Forest trees have long generation times and low migratory potential making them especially vulnerable to population fragmentation and reductions of genetic diversity due to insufficient tracking of niche optima and adaptational lags. Within clades of the genus Pinus, evolutionary histories appear to be riddled with hybridization …
Evaluating Population Genetic Structure And Potential Genomic Signals Of Natural Selection In A Migratory Songbird (Protonotaria Citrea), Tyler A. Hohenstein
Evaluating Population Genetic Structure And Potential Genomic Signals Of Natural Selection In A Migratory Songbird (Protonotaria Citrea), Tyler A. Hohenstein
Theses and Dissertations
In this study I attempted to further resolve the population genetic structure in the Prothonotary Warbler (Protonotaria citrea), and conducted an outlier SNP analysis and exploratory gene ontology analysis to investigate potential ongoing natural selection in the species. This analysis of population structure confirms previous work by DeSaix et al. (2019), where weak population structure was observed between eastern sites along the Atlantic Coastal Plain, and western sites in the Mississippi Alluvial Valley, possibly due to a genetic discontinuity across the Appalachian Mountains. I conducted two forms of outlier SNP analyses, a principal component analysis (PCA)-based approach to identify SNPs …
Coupled Structure-Function Responses To Disturbance: High Structural Complexity Resistance Supports Primary Production Resistance, Kerstin M. Niedermaier
Coupled Structure-Function Responses To Disturbance: High Structural Complexity Resistance Supports Primary Production Resistance, Kerstin M. Niedermaier
Theses and Dissertations
The capacity of forests to resist structural change and retain material legacies–the biotic and abiotic resources that persist through disturbance–is crucial to sustaining ecosystem functioning after disturbance. However, the role of forest structure as both a material legacy and feature supporting carbon (C) cycling stability following disturbance has not been widely investigated. We used a large-scale disturbance manipulation to ask whether LiDAR-derived canopy structures as material legacies drive 3-year responses of NPP to a range of disturbance severity levels. As part of the Forest Resilience Threshold Experiment (FoRTE) in northern Michigan, USA we simulated phloem-disrupting disturbances at a range of …
Advancing Forest Structure-Function Relationships: Linking Above- And Belowground Structure To Soil Respiration, Laura J. Hickey
Advancing Forest Structure-Function Relationships: Linking Above- And Belowground Structure To Soil Respiration, Laura J. Hickey
Theses and Dissertations
Variation in the soil-to-atmosphere C flux, or soil respiration (Rs), is influenced by a suite of biotic and abiotic factors, including soil temperature, soil moisture, and root biomass. However, whether canopy structure is tied to soil respiration through its simultaneous influence over these drivers is not known. We assessed relationships between measures of above- and belowground vegetation density and complexity, and evaluated whether Rs is linked to remotely sensed canopy structure through pathways mediated by established biotic and abiotic mechanisms. Our results revealed that, at stand-scale, canopy rugosity–a measure of complexity–and vegetation area index were coupled to soil respiration through …
Identifying The Human Homologs Of Yeast Rab Proteins Ypt10 & Ypt11 And A Global-Scale Louse Endosymbiont Genome Variation, Nathaniel P. Smith
Identifying The Human Homologs Of Yeast Rab Proteins Ypt10 & Ypt11 And A Global-Scale Louse Endosymbiont Genome Variation, Nathaniel P. Smith
Theses and Dissertations
Amyotrophic lateral sclerosis (ALS) is a late-onset fatal neurodegenerative disease that causes loss of upper and/or lower motor neurons, and currently has no treatment or cure available. Over 90% of cases occur spontaneously with unknown causes, highlighting the complexity of the disease, and only 10% of cases are linked to heritable genetic mutations. Numerous ALS-linked genes are conserved through evolution, and model organisms may therefore provide opportunities to understand disease pathology at a molecular or cellular level, proving instrumental in identifying therapeutic targets. ALS subtype 8 (ALS8) is caused by an autosomal dominant P56S mutation in the VAPB gene that …