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Full-Text Articles in Ecology and Evolutionary Biology

Troubled Waters: Threats And Extinction Risk Of The Sharks, Rays And Chimaeras Of The Arabian Sea And Adjacent Waters, Rima W. Jabado, Peter M. Kyne, Riley A. Pollom, David A. Ebert, Colin A. Simpfendorfer, Gina M. Ralph, Shakha S. Al Dhaheri, K. V. Akhilesh, Khadeeja Ali, Mohamud Hassan Ali Nov 2018

Troubled Waters: Threats And Extinction Risk Of The Sharks, Rays And Chimaeras Of The Arabian Sea And Adjacent Waters, Rima W. Jabado, Peter M. Kyne, Riley A. Pollom, David A. Ebert, Colin A. Simpfendorfer, Gina M. Ralph, Shakha S. Al Dhaheri, K. V. Akhilesh, Khadeeja Ali, Mohamud Hassan Ali

Biological Sciences Faculty Publications

The extinction risk of sharks, rays and chimaeras is higher than that for most other vertebrates due to low intrinsic population growth rates of many species and the fishing intensity they face. The Arabian Sea and adjacent waters border some of the most important chondrichthyan fishing and trading nations globally, yet there has been no previous attempt to assess the conservation status of species occurring here. Using IUCN Red List of Threatened Species Categories and Criteria and their guidelines for application at the regional level, we present the first assessment of extinction risk for 153 species of sharks, rays and …


Fish Assemblage Change Following The Structural Restoration Of A Degraded Stream, Carl A. Favata, Anabela Maia, Manisha Pant, Vaskar Nepal Oct 2018

Fish Assemblage Change Following The Structural Restoration Of A Degraded Stream, Carl A. Favata, Anabela Maia, Manisha Pant, Vaskar Nepal

VIMS Articles

Decades of anthropogenic pressure have harmed riverscapes throughout North America by degrading habitats and water quality and can result in the extirpation of sensitive aquatic taxa. Local stream restoration projects have increased in frequency, but monitoring is still infrequent. In 2010, Kickapoo Creek in East Central Illinois was subjected to a stream restoration project that included implementation of artificial riffles, riprap, scouring keys, and riparian vegetation. We monitored the restoration efforts for 6years after the restoration through annual sampling efforts at restored and reference sites to determine changes in habitat and fish assemblage using standard habitat sampling and electrofishing techniques. …


Protecting Breeding Stock Levels Of The Blue Swimmer Crab Resource In The South West : A Review Of Management Arrangements, Department Of Primary Industries And Regional Development Oct 2018

Protecting Breeding Stock Levels Of The Blue Swimmer Crab Resource In The South West : A Review Of Management Arrangements, Department Of Primary Industries And Regional Development

Fisheries management papers

This discussion paper identifies that the existing management arrangements do not adequately address the protection of the breeding stock across the resource because they have been developed at the scale of local estuaries and embayments. In particular, the arragements are not achieving appropriate levels of protection for mated, pre-spawned females, which become highly vulnerable to capture in late autumn, winter and spring.


Short-Term Low Salinity Mitigates Effects Of Oil And Dispersant On Juvenile Eastern Oysters: A Laboratory Experiment With Implications For Oil Spill Response Activities, Meagan N. Schrandt, Sean Powers, F.Scott Rikard, Wilawan Thongda, Eric Peatman Sep 2018

Short-Term Low Salinity Mitigates Effects Of Oil And Dispersant On Juvenile Eastern Oysters: A Laboratory Experiment With Implications For Oil Spill Response Activities, Meagan N. Schrandt, Sean Powers, F.Scott Rikard, Wilawan Thongda, Eric Peatman

University Faculty and Staff Publications

Following the Deepwater Horizon oil spill, eastern oyster (Crassostrea virginica) reefs in the northern Gulf of Mexico were exposed to oil and various associated clean-up activities that may have compromised oyster reef health. Included in the exposure was oil, dispersant, and in some locales, atypical salinity regimes. Oil and dispersants can be detrimental to oysters and the effects of salinity depend on the level. In addition to these extrinsic factors, genetic diversity of oyster populations may help the oysters respond to stressors, as demonstrated in other systems. We used a 3×3×2 factorial design to experimentally examine the effects …


Fisheries Bycatch Risk To Marine Megafauna Is Intensified In Lagrangian Coherent Structures, Kylie L. Scales, Elliot L. Hazen, Michael G. Jacox, Frederic Castruccio, Sara M. Maxwell, Rebecca L. Lewison, Steven J. Bograd Jul 2018

Fisheries Bycatch Risk To Marine Megafauna Is Intensified In Lagrangian Coherent Structures, Kylie L. Scales, Elliot L. Hazen, Michael G. Jacox, Frederic Castruccio, Sara M. Maxwell, Rebecca L. Lewison, Steven J. Bograd

Biological Sciences Faculty Publications

Incidental catch of nontarget species (bycatch) is a major barrier to ecological and economic sustainability in marine capture fisheries. Key to mitigating bycatch is an understanding of the habitat requirements of target and nontarget species and the influence of heterogeneity and variability in the dynamic marine environment. While patterns of overlap among marine capture fisheries and habitats of a taxonomically diverse range of marine vertebrates have been reported, a mechanistic understanding of the real-time physical drivers of bycatch events is lacking. Moving from describing patterns toward understanding processes, we apply a Lagrangian analysis to a high-resolution ocean model output to …


Spatial And Temporal Patterns Of Arctic Nearshore Fish Community And Food Web Structures, Mark B. Barton Jun 2018

Spatial And Temporal Patterns Of Arctic Nearshore Fish Community And Food Web Structures, Mark B. Barton

FIU Electronic Theses and Dissertations

Climate change and increasing anthropogenic activities are causing rapid changes to environmental and ecological processes in the Arctic Ocean. To better understand these changes, scientists have increased research efforts in these regions, but to date the number of studies on Arctic nearshore habitats are lacking. My dissertation responds to the paucity of information and investigates patterns in Arctic nearshore fish communities and food webs to gain insight to how these ecosystems may shift as these changes continue. I used multivariate statistical analysis to examine patterns in community structure and composition to determine that Arctic nearshore fish communities are largely driven …


Pearl Oyster (Pinctada Maxima) Resource Allocation Report : Prepared By The Integrated Fisheries Allocation Advisory Committee, Department Of Fisheries Jun 2018

Pearl Oyster (Pinctada Maxima) Resource Allocation Report : Prepared By The Integrated Fisheries Allocation Advisory Committee, Department Of Fisheries

Fisheries management papers

No abstract provided.


Gulls, Martin S. Lowney, Scott F. Beckerman, Scott C. Barras, Thomas W. Seamans May 2018

Gulls, Martin S. Lowney, Scott F. Beckerman, Scott C. Barras, Thomas W. Seamans

Wildlife Damage Management Technical Series

Abundant gull (Figure 1) populations in North America have led to a variety of conflicts with people. Gulls cause damage at aquaculture facilities and other properties, and often collide with aircraft. Their use of structures on and near water results in excessive amounts of bird droppings on boats and docks. Their presence near outdoor dining establishments, swimming beaches, and recreational sites can lead to negative interactions with people. Large amounts of gull fecal material pollutes water and beaches resulting in drinking water contamination and swim bans. A combination of dispersal techniques, exclusion and limited lethal control may reduce damage to …


Western Australian Sea Cucumber Resource - Harvest Strategy 2018-2023, Department Of Primary Industries And Regional Development May 2018

Western Australian Sea Cucumber Resource - Harvest Strategy 2018-2023, Department Of Primary Industries And Regional Development

Fisheries management papers

This publication of harvest strategies is intended to make the decision-making considerations and processes for the management of specified aquatic resources publicly transparent and provide a basis for informed dialogue on management actions with resource users and other stakeholders.


The Relationship Between Measures Of Annual Livestock Disturbance In Western Riparian Areas And Stream Conditions Important To Trout, Salmon, And Char, Lindsey M. Goss, Brett B. Roper Apr 2018

The Relationship Between Measures Of Annual Livestock Disturbance In Western Riparian Areas And Stream Conditions Important To Trout, Salmon, And Char, Lindsey M. Goss, Brett B. Roper

Watershed Sciences Faculty Publications

Managing livestock disturbance in riparian zones in a manner that provides economic returns to ranchers while protecting streams is an important aspect of rangeland management on public lands in the western United States. Attempts to balance economic and ecologic outcomes have been made more difficult due to the presence of several salmonid species that are protected under the Endangered Species Act. One approach to proper management of livestock use near streams has been to define the allowable limits of disturbance using 2 metrics, streambank alteration and stubble height. We evaluated 153 stream reaches within the Interior Columbia Basin to determine …


Monitoring The Abundance Of American Shad And River Herring In Virginia's Rivers - 2017 Annual Report, Eric J. Hilton, Rob Latour, Patrick E. Mcgrath, Brian Watkins, Ashleigh Magee Apr 2018

Monitoring The Abundance Of American Shad And River Herring In Virginia's Rivers - 2017 Annual Report, Eric J. Hilton, Rob Latour, Patrick E. Mcgrath, Brian Watkins, Ashleigh Magee

Reports

This report describes the results of the twentieth year of a continuing study to estimate the relative abundance and assess the status of American shad (Alosa sapidissima) stocks in Virginia by monitoring the spawning runs in the James, York and Rappahannock rivers in spring 2017, evaluating hatchery programs, and contributing to coast-wide assessments (ASMFC 2007). We also report on two fishery-independent monitoring programs, one using staked gillnets in the Rappahannock River (year 2) and the other using anchor gillnets in the Chickahominy River (year 3; a major tributary of the James River),to determine relative abundance and stock structure for the …


Assessing Trade-Offs In Large Marine Protected Areas, Tammy E. Davies, Graham Epstein, Stacy E. Aguilera, Cassandra M. Brooks, Michael Cox, Louisa S. Evans, Sara M. Maxwell, Mateja Nenadovic, Natalie C. Ban Apr 2018

Assessing Trade-Offs In Large Marine Protected Areas, Tammy E. Davies, Graham Epstein, Stacy E. Aguilera, Cassandra M. Brooks, Michael Cox, Louisa S. Evans, Sara M. Maxwell, Mateja Nenadovic, Natalie C. Ban

Biological Sciences Faculty Publications

Large marine protected areas (LMPAs) are increasingly being established and have a high profile in marine conservation. LMPAs are expected to achieve multiple objectives, and because of their size are postulated to avoid trade-offs that are common in smaller MPAs. However, evaluations across multiple outcomes are lacking. We used a systematic approach to code several social and ecological outcomes of 12 LMPAs. We found evidence of three types of trade-offs: trade-offs between different ecological resources (supply trade-offs); trade-offs between ecological resource conditions and the well-being of resource users (supply-demand trade-offs); and trade-offs between the well-being outcomes of different resource users …


Compression And Relaxation Of Fishing Effort In Response To Changes In Length Of Fishing Season For Red Snapper (Lutjanus Campechanus) In The Northern Gulf Of Mexico, Sean P. Powers, Kevin Anson Jan 2018

Compression And Relaxation Of Fishing Effort In Response To Changes In Length Of Fishing Season For Red Snapper (Lutjanus Campechanus) In The Northern Gulf Of Mexico, Sean P. Powers, Kevin Anson

University Faculty and Staff Publications

A standard method used by fisheries managers to decrease catch and effort is to shorten the length of a fishery; however, data on recreational angler response to this simple approach are surprisingly lacking. We assessed the effect of variable season length on daily fishing effort, measured by using numbers of boat launches per day, anglers per boat, and anglers per day from video observations, in the recreational sector of the federal fishery for red snapper (Lutjanus campechanus) in coastal Alabama. From 2012 through 2017, season length fluctuated from 3 to 40 d. Daily effort, measured by using mean number of …


Nebraska Invasive Plants Field Guide, Nebraska Invasive Species Program Jan 2018

Nebraska Invasive Plants Field Guide, Nebraska Invasive Species Program

Nebraska Invasive Species Program

Invasive species are plants, animals or pathogens that are non-native to an ecosystem. They cause harm to the economy, environment or human health. They negatively affect native species and ecosystems and interfere with outdoor recreation opportunities. This guide identifies federal and state-listed noxious weeds. Federal noxious weeds are regulated by the U.S. Department of Agriculture; State noxious weeds are regulated by the Nebraska Department of Agriculture, Animal and Plant Health Protection, Noxious Weed Program. Aquatic invasive species are listed and regulated by Nebraska Game and Parks Commission.

ABSINTH WORMWOOD • AMUR HONEYSUCKLE • AUTUMN OLIVE • BRITTLE NAIAD • CALLERY …


A Dynamic Ocean Management Tool To Reduce Bycatch And Support Sustainable Fisheries, Elliot L. Hazen, Kylie L. Scales, Sara M. Maxwell, Dana K. Briscoe, Heather Welch, Steven J. Bograd, Helen Bailey, Scott R. Benson, Tomo Eguchi, Heidi Dewar Jan 2018

A Dynamic Ocean Management Tool To Reduce Bycatch And Support Sustainable Fisheries, Elliot L. Hazen, Kylie L. Scales, Sara M. Maxwell, Dana K. Briscoe, Heather Welch, Steven J. Bograd, Helen Bailey, Scott R. Benson, Tomo Eguchi, Heidi Dewar

Biological Sciences Faculty Publications

Seafood is anessential sourceofprotein formore than3billionpeopleworldwide, yet bycatchof threatened species in capture fisheries remains a major impediment to fisheries sustainability. Management measures designed to reduce bycatch often result in significant economic losses and even fisheries closures. Static spatial management approaches can also be rendered ineffective by environmental variability and climate change, as productive habitats shift and introduce new interactions between human activities and protected species. We introduce a new multispecies and dynamic approach that uses daily satellite data to track ocean features and aligns scales of management, species movement, and fisheries. To accomplish this, we create species distribution models for …


Estimating Exploitation Rates In The Alabama Red Snapper Fishery Using A High-Reward Tag–Recapture Approach, Dana K. Sackett, Mattgew Catalano, J. Marcus Drymon, Sean P. Powers, Mark Albins Jan 2018

Estimating Exploitation Rates In The Alabama Red Snapper Fishery Using A High-Reward Tag–Recapture Approach, Dana K. Sackett, Mattgew Catalano, J. Marcus Drymon, Sean P. Powers, Mark Albins

University Faculty and Staff Publications

Accurate estimates of exploitation are essential to managing an exploited fishery. However, these estimates are often dependent on the area and vulnerable sizes of fish considered in a study. High-reward tagging studies offer a simple and direct approach to estimating exploitation rates at these various scales and in examining how model parameters impact exploitation rate estimates. These methods can ultimately provide a better understanding of the spatial dynamics of exploitation at smaller local and regional scales within a fishery—a measure often needed for more site-attached species, such as the Red Snapper Lutjanus campechanus. We used this approach to tag 724 …


Diversity And Phylogenetic Relationships Of European Species Of Crepidostomum Braun, 1900 (Trematoda: Allocreadiidae) Based On Rdna, With Special Reference To Crepidostomum Oschmarini Zhokhov & Pugacheva, 1998, Romualda Petkevičiūtė, Virmantas Stunžėnas, Alexander E. Zhokhov, Larisa G. Poddubnaya, Gražina Stanevičiūtė Jan 2018

Diversity And Phylogenetic Relationships Of European Species Of Crepidostomum Braun, 1900 (Trematoda: Allocreadiidae) Based On Rdna, With Special Reference To Crepidostomum Oschmarini Zhokhov & Pugacheva, 1998, Romualda Petkevičiūtė, Virmantas Stunžėnas, Alexander E. Zhokhov, Larisa G. Poddubnaya, Gražina Stanevičiūtė

Harold W. Manter Laboratory of Parasitology: Faculty and Staff Publications

Background

Within the genus Crepidostomum Braun, 1900, identification of species and taxonomic decisions made only on the basis of adult morphology have resulted in great problems associated with evaluating actual diversity and validity of species. Life cycle data, while equal in importance to adult characters, are scarce, controversial or incomplete for most Crepidostomum spp. In this study, rDNA sequences generated from adult and larval Crepidostomum spp. and some other allocreadiid species were analyzed to reveal the diversity and phylogenetic relationships of the species and their host range. Detailed morphological description based on light microscopy, SEM tegumental surface topography and genetic …


New Applications Of Radio Frequency Identification Stations For Monitoring Fish Passage Through Headwater Road Crossings And Natural Reaches, Ian R. Macleod, Charles J. Gagen Jan 2018

New Applications Of Radio Frequency Identification Stations For Monitoring Fish Passage Through Headwater Road Crossings And Natural Reaches, Ian R. Macleod, Charles J. Gagen

Faculty Publications - Biological Sciences

Within the Ouachita National Forest, roads and streams intersect each other thousands of times. Many of these road crossings alter stream hydrology and potentially limit longitudinal fish movement. To investigate the potential impacts of these road crossings on fish passage, we monitored movements of 3 native fish species (n = 2,171) individually tagged with radio frequency identification (RFID) tags in 2012 and 2013. We installed solar-powered RFID stations in 2 streams with road crossings and 2 reference streams without road crossings. Each of the 4 monitoring stations included a pair of antennas bracketing a road crossing (or similarly-sized natural reach) …