Biology Commons^™

Ranging Patterns And Habitat Utilization Of Northern River Otters, Lontra Canadensis, In Missouri: Implications For The Conservation Of A Reintroduced Species, Deborah Dorothy Boege-Tobin

Dissertations

I studied the spacing patterns and habitat utilization by reintroduced northern river otters, Lontra canadensis, at two sites in Missouri because previous studies of otters indicate, plasticity of a species social structure will likely be due to the tactics employed in acquiring resources in any given area. Seven hypotheses were tested by employing radio-tracking, habitat assessment and geographic information system approaches: (1) home range (HR) and core area (CA) size differ by sex; (2) HR and CA size differ in breeding vs. non-breeding seasons; (3) percent range overlap differs by sex; (4) habitat utilization, as indicated by latrine use, …

The Use Of Antibiotic Resistance Profiles To Access The Source Of Fecal Contamination In The Rowan County, Kentucky Watershed, Logan Harrison Burns

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Logan Harrison Burns on December 15, 2005.

Exposure To Methamphetamine And Phencyclidine During Development And Subsequent Behavioral Change, Takehiro Minamoto

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Takehiro Minamoto on December 2, 2005.

Limits Of Temperature Tolerance Of Leishmania Enriettii And Leishmania Hertigi In A Real-Time Pcr Assay, Christina Salinas

Theses & Dissertations

Protozoans of the genus Leishmania are intracellular parasites found across five continents. They cycle between a promastigote form inside the digestive tracts of blood-feeding female sand flies and an amastigote form within mammalian host macrophages. Temperature is an important factor that must be defeated in order for the parasites' survival and continuance. This paper studies the limits of temperature tolerance by Leishmania enriettii and Leishmania hertigi. It was hypothesized that a correlation would exist between the limits of temperature tolerance to body temperature of their host. I explored growth characteristics at 21,27,29, 33, 35, 37, and 39° C. It was …

Hybridization Of Lythrurus Fasciolaris (Cope) And Lythrurus Umbratilis (Girard) (Cypriniformes: Cyprinidae) In The Ohio River Basin, Robert L. Hopkins Ii

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Robert L. Hopkins, II on November 14, 2005.

An Investigation Of The Changes Of Species Richness And Distribution Of The Unionidae (Bivalvia: Molusca) Within The Pamunkey Watershed, William Robert Lees

Master's Theses

A survey of the Unionidae within the Pamunkey Watershed was conducted to investigate changes in distribution and species richness compared to a previous survey (Riddick, 1973) conducted over 30 years ago. Species richness decreased from 10 species in the previous survey to four species in the present survey. Notable increases of species richness were found in the upper South Anna and the lower North Anna regions, while sizable decreases were found in the lower South Anna and the upper and middle regions of the Pamunkey River. Regression analyses and t-tests comparing mussel survey data with habitat parameters were conducted to …

Determining The Phylogenetic Relationship Of A Collection Of Hydra Strains And Species Using The Mitochondrial Genes : Lrrna, Trna-Trp And Coii, Jacob Zuckman

Theses, Dissertations and Culminating Projects

The discovery of the mitochondrial DNA (mtDNA) in the early 1960’s ushered in the field of organellar genetics. Evidence from both genetic and physical techniques has demonstrated that mtDNA are generally circular in structure, and that they represent the vestigial structure of the ancestral prokaryotic endosymbiont genome (Nosek et al., 1998). The more than 90 vertebrates and invertebrates sequenced to date have been found to have a remarkably constant gene content. With few exceptions, each contains the genes for 13 energy pathway proteins, the 2 RNA components of mitochondrial ribosomes (23S and 16S rRNA), and 22 transfer RNAs (Pont-Kingdon et …

Ecology Of The Plankton Of Lakes Wapalanne And Ocquittunk In Sussex County, New Jersey, Malgorzata Barbara Drazek-Falah

Theses, Dissertations and Culminating Projects

The diversity of planktonic organisms was studied for seven months in Lake Wapalanne and Lake Ocquittunk (Stokes State Forest), Sussex County, New Jersey. Relative abundance and species diversity were studied as well as water quality including parameters: temperature, pH, dissolved oxygen, conductivity and depth of lakes. The data of seasonal changes in abundance of organisms and water quality was compared between both lakes.

Three stations were set up along the straight line on Lake Wapalanne, buoyed by diatometers, which were used for diatom collection. There were also three stations located along the sides of Lake Ocquittunk arbitrary picked. Plankton samples …

Habitat-Specific Diet Of The Mottled Sculpin And Its Impact On Benthic Invertebrate Community Structure, Brendan M. Earl

Masters Theses

The relationships between predators and their prey are important and influential components in the structure of ecological communities. These interactions not only impact the species involved, but can also have a wide range of direct and indirect effects that resonate throughout the community. In Michigan trout streams, one of the main predators of benthic invertebrates is the mottled sculpin (Cottus bairdi) whose diet and selective predation may influence benthic invertebrate community structure. Using gastric lavage, the stomach contents of sculpins from both erosional and depositional habitats were collected and analyzed to determine the main prey types, prey preference, …

Reaction Of Tardigrades (Hypsibius) To Physical And Chemical Extremes, Limor Raz

Theses and Dissertations

The process of cryptobiosis is characterized by a complete state of body water dehydration and undetectable metabolic activity, which allows tardigrades {Hypsibius) to escape environmental stress when conditions become unfavorable. In our research, Hypsibius was tested in a laboratory under pH levels of 3 to 10 and a salinity concentration gradient. In the pH experiment, we placed tardigrades in petri dishes with agar solution in an experimental pH and measured the average distance traveled. We expected them to respond favorably to a neutral pH of 7 which is common in most living organisms by showing increased movement. In the salinity …

Great Lakes Coastal Wetland Fragmentation: Edge Effects On Zooplankton, Macroinvertebrate, And Larval Fish Communities, Keto F. Gyekis

Masters Theses

Wetlands are some of the most diverse and ecologically important habitats in the world. Although wetlands have been plagued by anthropogenic destruction and disturbance, there is a general lack of knowledge regarding how fragmentation affects these systems. During the summer of 2004 and the spring and summer of 2005,1 investigated edge effects associated with anthropogenic fragmentation in 25 fringing marshes of Lakes Michigan and Huron. Environmental data, microcrustacean zooplankton, aquatic macroinvertebrates, and larval fish were collected along transects extending into each marsh from reference (natural) and anthropogenic (artificial) edges. Bulrush stems of Great Lakes fringing marshes attenuated the influx and …

Phylogeny And Biogeography Of Ice Crawlers (Insecta: Grylloblattodea): Evidence From Six Molecular Loci, Karl J. Jarvis

Theses and Dissertations

Ice crawlers (Insecta: Grylloblattodea) are rarely encountered insects that consist of five genera representing 26 species from North America and Asia. Asian grylloblattids are the most diverse, but North American ice crawlers (genus Grylloblatta) are known for their adaptation to cold conditions. Phylogenetic relationships among grylloblattid species and genera are not known. Late Pleistocene glaciations had a major effect on the current Grylloblatta distribution, because their specific habitat requirements restrict them to small geographical areas. Six genes were sampled in 37 individuals for 18S rRNA, 28S rRNA, histone 3, 12S rRNA, 16S rRNA, and cytochrome oxidase II (COII) from 27 …

Plasticity In Selective Phonotaxis And Neuronal Responses Of Acheta Domesticus, Benjamin Alejandro Navia

Loma Linda University Electronic Theses, Dissertations & Projects

Plasticity of phonotaxis in Acheta domesticus was evaluated in 207 young (5-7 days) and 328 old (28 days) female crickets. Of those that responded (508), their phonotaxis was grouped into selective (80% of young and 34% of old) and unselective (66% of old and 20% of young) on the basis of their responses to syllable period (SP). Two additional subcategories were also found. Some females were selective to the longer syllable periods (18% young, 20% old) while others were selective to the shorter syllable periods (7% young and 12% old). The L3 prothoracic auditory interneuron exhibits a decrementing response to …

Bioinformatics Study Of Mammalian Mrna Polydenylation, Haibo Zhang

Dissertations

Messenger RNA polyadenylation is one of the key post-transcriptional events in mammalian cells, which have influences on many aspects of mRNA metabolism. Several human diseases have been shown to associate with abnormal polyadenylation, highlighting the importance of this process. The availability of the complete sequence of human and mouse genomes, together with their gene expression data provides valuable resources to study mRNA polyadenylation on a system level. This dissertation addresses the following issues of mammalian mRNA polyadenylation through bioinformatics approaches: (1) the extensive documentation of several key aspects of polyadenylation sites in humans and mice on a genomic level; (2) …

The Role Of Puf3 Protein Interactions In The Regulation Of Mrna Decay In Yeast Saccharomyces Cerevisiae, Shervin Sean Houshmandi

Dissertations

The regulation of messenger RNA (mRNA) metabolism is an important step in proper gene expression. In many eukaryotic organisms this regulation can be mediated by a group of highly conserved RNA-binding proteins known as the Puf family of proteins. The yeast Saccharomyces cerevisiae has several proteins that belong to this family. One of the yeast Puf proteins, Puf3p, binds and regulates the COX17 mRNA, which codes for a protein involved in mitochondrial copper transport. Specifically, Puf3p stimulates the decay of COX17 mRNA. However, the precise mechanism of Puf3p binding and decay regulation is yet unknown. The goal of this research …

Relative Influence Of Landscape Indicators On Macroinvertebrate Communities In A Predominately Forested Watershed: Effects Of Spacial Scale, Robert Johnson

Morehead State Theses and Dissertations

A thesis presented to the faculty of the College of Science and Technology at Morehead State University in partial fulfillment of the requirements for the Degree of Master of Science by Robert Johnson on May 9, 2005.

The Effects Of Heavy Metals On The Cyanobacterium, Anacystis Nidulans, Suzen Sameer Awad

Theses, Dissertations and Culminating Projects

Anacystis nidulans is a rod-shaped, freshwater cyanobacterium. Like other cyanobacteria, it is an obligate photoautotroph that is similar to gram-negative bacteria in cell wall structure, replication and ability to harbor plasmids. Anacystis nidulans is often used as an indicator of the presence and level of pollutants in the environment. Mercury, iron, cadmium, and zinc are among the heavy metal contaminants found in the environment and in bodies of freshwater through industrial discharges, agricultural runoff and sewage treatments. In very low concentrations, they do not pose any threat to the environment, but high concentrations can be lethal. Different microorganisms vary in …

Phosphotyrosine Phosphatases Of The Att-20 Murine Corticotroph Cell Line, Kari A. Belin

Seton Hall University Dissertations and Theses (ETDs)

Somatostatin (somatotropin release inhibitory factor; SRIF) is a peptide-signaling molecule that activates a family of heterotrimeric guanine nucleotide binding protein (G­ protein) coupled receptors (sst.-sst-). SRIF receptors control essential intracellular signaling events and, by reducing cyclic nucleotide levels, ion concentrations and protein phosphorylation, ultimately controlling cell proliferation and secretion. In the current study, we investigated the intracellular phosphatase activity present in the AtT-20 cell, as well as whether these enzymes were under direct SRIF receptor control. AtT-20 cells retain many of the properties of anterior pituitary corticotrophs, yet are an established cell line that expresses at least two SRIF receptor …

Characterization Of The Domain-Domain Interactions And Dna Binding In The Saccharomyces Cervisiae Hmcb Protein, Hmo1, Kevin Thomas Bauerle

Honors Theses

No abstract provided.

Cardiac Protein Rgs2: Structural And Functional Determinants, Stephanie Jan Chambers

Undergraduate Honors Capstone Projects

In this study, I explored the structure-function relationships of a cardiac RGS (regulator of G-protein signaling) protein, RGS2.

Contractions of the heart are triggered by calcium ions (Ca) entering heart cells through L-type Ca channels (1a). The activity of L-type channels (and thereby Ca influx) is modulated by cell surface receptors that couple to intracellular G proteins. G proteins in turn, are regulated by a newly-discovered family of proteins called RGS. RGS proteins speed the hydrolysis of GTP by G proteins, and thereby control the strength and duration of G protein-mediated signals. Stimulation of G proteins, which are coupled to …

Modulation Of L-Type (Cav1.3) Calcium Channels, Brian Thomas

Undergraduate Honors Capstone Projects

L-type Ca_V1.3 calcium channels perform critical functions in auditory hair cells, cardiac pacemaker cells, and pancreatic β-cells, but little is currently known about how these channels are modulated by cell signaling mechanisms. To begin to address this issue, we have tested the ability of various G protein-coupled receptors (GPCRs) to modulate Ca_V1.3 expressed in a mammalian cell line. Expression plasmids encoding Ca_V1.3 and auxiliary calcium channel subunits α2-δb and β3 were transiently coexpressed in HEK293 cells along with plasmids encoding a single type of GPCR. As a control for functional expression of the GPCR, …

Collection, Isolation And Evaluation Of Nitrogen Fixing Bacteria In The Rio Grande Valley Of Texas, Thomas M. Eubanks

Theses and Dissertations - UTB/UTPA

Isolation from local soil samples with Phaseolus vulgaris (L.) produced 20 samples from which pure cultures were obtained. A commercial strain of Rhizobium #132 was obtained from Becker Underwood and included as a standard in the experiment. The results demonstrated that a variety of infective and effective of strains of Rhizobium nodulating Phaseolus vulgaris (L.) exist in the native soils of the Rio Grande Valley of Texas. A cluster of effective bacteria was identified and can serve as a basis for recommendations to inoculant industry in the Valley. An isolate collection has been established to serve as a source of …

Characterization Of Microbial Communities In Karstic Sediments : A Study Of Cave Bacteria In Central Kentucky., Justine Kay Roback 1964-

Electronic Theses and Dissertations

Few previous studies have compared microbial communities in subterranean and surface environments. Chemical analyses used to characterize the surface and cave microbial environments indicated limited exchange between surface and subsurface waters. Here, bacterial communities from four distinct cave sediments collected in central Kentucky and adjacent surface streams were compared using a combination of culture and molecular methods. Predictions were that: 1) Cave communities will have unique community structures when compared to those of nearby surface sediments, and 2) Genetic diversity of bacterial communities in cave sediments will be higher than those in nearby surface sediments. Since diversity and community structure …

Cell Wall Functions Required For Mating In Saccharomyces Cerevisiae, Stephen Dougherty

Honors Capstone Projects - All

In order for two haploid yeast cells to undergo normal fusion during mating, adhesive contacts are formed by a general class of fungal proteins termed “adhesins”. Within this family there is a subgroup of cell wall proteins termed “agglutinins” which are known to mediate aggregation, thereby increasing mating efficiency in liquid medium (Aga1p, Aga2p, Aga1p). In the absence of sufficient mating adhesive contacts we observed that cells undergo defective morphogenesis, apparently continuing to grow at their tips after fusing at the expense of laterally expanding their conjugation bridge. Based on these qualitative observations, I utilized differential interference microscopy to capture …

The Role Of Dosage Sensitive Sex Reversal Adrenal Hyperplasia Congenita 1 (Dax-1) In Mouse Oogenesis, Krystal Wilson

Honors Capstone Projects - All

Although critically important to fertility and reproduction, the mechanisms controlling development of mammalian primordial germ cells into functional oocytes are poorly understood. Understanding the mechanisms that regulate oocyte development will ultimately reveal significant insights into female infertility problems in mammals, including humans. In order to decipher what mediates the formation of a functional oocyte, we are studying oogenesis in the mammalian model Mus musculus. During mouse embryonic development the oocytes develop as interconnected clusters of cells called germline cysts. Evidence suggests that in humans, oocytes are also organized into cysts. Eventually the cysts undergo programmed cell breakdown, each giving …

Developing A Constitutively Active Aryl Hydrocarbon Receptor In The Mouse Heart, Bruno Decaria

Honors Capstone Projects - All

Abstract not Included

Digestibility, Nitrogen Balance, And Blood Metabolites In Llama And Alpaca Fed Barley And Barley Alfalfa Forages., Heather Loree Davies

Theses and Dissertations

These projects were conducted to determine the digestibility of forage diets with differing CP levels in llamas and alpacas. The Utah study was designed to compare llama and alpaca nutritional parameters to determine if nutritional recommendations for llamas can be directly extrapolated to alpacas. The first study evaluated the effects of forage quality on blood metabolites and nitrogen balance in mature, intact male llamas (n = 4, 36 ± 4.4 months, 87 ± 17 kg) at high altitude in Letanias, Bolivia (4,267 m = aprox.14,000 ft above sea level). A second experiment was conducted with eight adult gelded camelids (n …

Functional Genomics Of Carboxyltransferase, Nathan R. Ranney

Honors Theses

No abstract provided.

Social Interactions Of Lythrypnus Dalli And Their Effects On Aggression, Neuropeptides, Steroid Metabolism, And Sex-Typical Morphology, Michael Paul Black

Biology Dissertations

Social interactions can have profound effects on the behavior, physiology, and overall fitness of an individual. An example of this in Lythrypnus dalli is the removal of a male from a social group resulting in a dominant female fish changing sex. The dominant female's transformation involves a suite of changes including brain, behavior, morphology, and physiology. Following the social trigger (male removal), sex-changing individuals' morphology, steroid levels, and changes in the behavior were quantified in the field and compared to results found previously in the laboratory. There were lower rates of aggressive and courtship behavior in the field, but the …

Function And Role Of Synaptotagmin Proteins In Yeast, Aaron J. Yang

Honors Capstone Projects - All

In the genome of the budding yeast, Saccharomyces cerevisiae, a family of proteins is encoded that resembles the Ca2+ sensing synaptotagmins present in neuronal cells of higher eukaryotes. The synaptotagmins couple a rise in cytosolic Ca2+ with synaptic vesicle formation and release during the process of vesicular trafficking and exocytosis. This process is important in higher organisms for neurotransmitter release and signal transmission. At least a dozen synaptotagmin isoforms exist, some that are expressed outside the nervous system, suggesting that the synaptotagmin proteins might regulate membrane trafficking in a variety of different cell types. The synaptotagmin proteins in higher …