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Full-Text Articles in Biology

Competitive Replacement Of Invasive Congeners May Relax Impact On Native Species: Interactions Among Zebra, Quagga, And Native Unionid Mussels, Lyubov E. Burlakova, Brianne L. Tulumello, Alexander Y. Karatayev, Robert A. Krebs, Donald W. Schloesser, Wendy L. Paterson, Traci A. Griffith, Mariah W. Scott, Todd Crail, David T. Zanatta Dec 2014

Competitive Replacement Of Invasive Congeners May Relax Impact On Native Species: Interactions Among Zebra, Quagga, And Native Unionid Mussels, Lyubov E. Burlakova, Brianne L. Tulumello, Alexander Y. Karatayev, Robert A. Krebs, Donald W. Schloesser, Wendy L. Paterson, Traci A. Griffith, Mariah W. Scott, Todd Crail, David T. Zanatta

Biological, Geological, and Environmental Faculty Publications

Determining when and where the ecological impacts of invasive species will be most detrimental and whether the effects of multiple invaders will be superadditive, or subadditive, is critical for developing global management priorities to protect native species in advance of future invasions. Over the past century, the decline of freshwater bivalves of the family Unionidae has been greatly accelerated by the invasion of Dreissena. The purpose of this study was to evaluate the current infestation rates of unionids by zebra (Dreissena polymorpha) and quagga (D. rostriformis bugensis) mussels in the lower Great Lakes region 25 …


Ecosystem Regime Change Inferred From The Distribution Of Trace Metals In Lake Erie Sediments, Fasong Yuan, Richard Depew, Cheryl Soltis-Muth Dec 2014

Ecosystem Regime Change Inferred From The Distribution Of Trace Metals In Lake Erie Sediments, Fasong Yuan, Richard Depew, Cheryl Soltis-Muth

Biological, Geological, and Environmental Faculty Publications

Many freshwater and coastal marine ecosystems across the world may have undergone an ecosystem regime change due to a combination of rising anthropogenic disturbances and regional climate change. Such a change in aquatic ecosystems is commonly seen as shifts in algal species. But considerably less detail is known about the eutrophication history in terms of changes in algal productivity, particularly for a large lake with a great deal of spatial variability. Here we present an analysis of trace metals (Cu, Ni, Cd, and Pb) on a sediment core recovered from Lake Erie, off the Vermilion coast of northern Ohio, USA, …


Suppression Of Subtelomeric Vsg Switching By Trypanosoma Brucei Trf Requires Its Ttaggg Repeat-Binding Activity, Sanaa E. Jehi, Xiaohua Li, Ranjodh Sandhu, Fei Ye, Imaan Benmerzouga, Mingjie Zhang, Yanxiang Zhao, Bibo Li Nov 2014

Suppression Of Subtelomeric Vsg Switching By Trypanosoma Brucei Trf Requires Its Ttaggg Repeat-Binding Activity, Sanaa E. Jehi, Xiaohua Li, Ranjodh Sandhu, Fei Ye, Imaan Benmerzouga, Mingjie Zhang, Yanxiang Zhao, Bibo Li

Biological, Geological, and Environmental Faculty Publications

Trypanosoma brucei causes human African trypanosomiasis and regularly switches its major surface antigen, VSG, in the bloodstream of its mammalian host to evade the host immune response. VSGs are expressed exclusively from subtelomeric loci, and we have previously shown that telomere proteins TbTIF2 and TbRAP1 play important roles in VSG switching and VSG silencing regulation, respectively. We now discover that the telomere duplex DNA-binding factor, TbTRF, also plays a critical role in VSG switching regulation, as a transient depletion of TbTRF leads to significantly more VSG switching events. We solved the NMR structure of the DNA-binding Myb domain of TbTRF, …


Paired Oxygen Isotope Records Reveal Modern North American Atmospheric Dynamics During The Holocene, Zhongfang Liu, Kei Yoshimura, Gabriel J. Bowen, Nikolaus H. Buenning, Camille Risi, Jeffrey M. Welker, Fasong Yuan Apr 2014

Paired Oxygen Isotope Records Reveal Modern North American Atmospheric Dynamics During The Holocene, Zhongfang Liu, Kei Yoshimura, Gabriel J. Bowen, Nikolaus H. Buenning, Camille Risi, Jeffrey M. Welker, Fasong Yuan

Biological, Geological, and Environmental Faculty Publications

The Pacific North American (PNA) teleconnection has a strong influence on North American climate. Instrumental records and century-scale reconstructions indicate an accelerating tendency towards the positive PNA state since the mid-1850s, but much less is known about long-term PNA variability. Here we reconstruct PNA-like climate variability during the mid- and late Holocene using paired oxygen isotope records from two regions in North America with robust, anticorrelated isotopic response to the modern PNA. We identify mean states of more negative and positive PNA-like climate during the mid- and late Holocene, respectively. Superimposed on the secular change between states is a robust, …


Atrial Fibrillation Associated Chromosome 4q25 Variants Are Not Associated With Pitx2c Expression In Human Adult Left Atrial Appendages, Shamone R. Gore-Panter, Jeffery Hsu, Peter Hanna, A. Marc Gillinov, Gosta Pettersson, David W. Newton, Christine S. Moravec, David R. Van Wagoner, Mina K. Chung Jan 2014

Atrial Fibrillation Associated Chromosome 4q25 Variants Are Not Associated With Pitx2c Expression In Human Adult Left Atrial Appendages, Shamone R. Gore-Panter, Jeffery Hsu, Peter Hanna, A. Marc Gillinov, Gosta Pettersson, David W. Newton, Christine S. Moravec, David R. Van Wagoner, Mina K. Chung

Biological, Geological, and Environmental Faculty Publications

Atrial Fibrillation (AF), the most common sustained arrhythmia, has a strong genetic component, but the mechanism by which common genetic variants lead to increased AF susceptibility is unknown. Genome-wide association studies (GWAS) have identified that the single nucleotide polymorphisms (SNPs) most strongly associated with AF are located on chromosome 4q25 in an intergenic region distal to the PITX2 gene. Our objective was to determine whether the AF-associated SNPs on chromosome 4q25 were associated with PITX2c expression in adult human left atrial appendages. Analysis of a lone AF GWAS identified four independent AF risk SNPs at chromosome 4q25. Human adult left …


Ubiquitin-Proteasome System Modulates Platelet Function, Nilaksh Gupta Jan 2014

Ubiquitin-Proteasome System Modulates Platelet Function, Nilaksh Gupta

ETD Archive

Atherothrombotic diseases are responsible for more than 25 of all deaths worldwide. Anti-platelet drugs are the mainstay treatment because of the direct involvement of platelets in the initiation and propagation of thrombosis. However, the currently available anti-platelet drugs, such as antagonists of platelet receptors or of effector systems participating in platelet activation, have their own limitations. A new mode of affecting platelet reactivity may prove to offer unique advantages in a host of clinical settings. Proteasome inhibitors are in clinical use to treat hematologic cancers, but also reduce thrombosis. Whether the proteasome participates in platelet activation or function is opaque …


Acute And Chronic Rejection: Compartmentalization And Kinetics Ff Counterbalancing Signals In Cardiac Transplants, Anupurna Kaul Jan 2014

Acute And Chronic Rejection: Compartmentalization And Kinetics Ff Counterbalancing Signals In Cardiac Transplants, Anupurna Kaul

ETD Archive

Heart disease is the major cause of mortality in the United States and other parts of the world. Heart transplantation is the treatment of choice for patients with end stage heart failure. However, transplanted organs fail due to either acute or chronic rejection. This acute and chronic rejection impacts distinct compartments of cardiac allografts. Acute rejection is characterized by infiltration of mononuclear cells whereas chronic rejection is characterized by progressive narrowing of coronary arteries. In a minor histoincompatibility mismatch mouse model we found hearts transplanted from male to female C57BL/6 mice undergo an acute rejection with diffuse interstitial infiltrates at …


Circadian Regulation Of Mtor Signaling Via Bmal1 Dependent Mechanism, Rohini Vishal Khapre Jan 2014

Circadian Regulation Of Mtor Signaling Via Bmal1 Dependent Mechanism, Rohini Vishal Khapre

ETD Archive

Understanding mechanisms of aging is important for the treatment and prevention of age-associated pathologies. However, these mechanisms are not well understood. Recently we have demonstrated that the circadian clock (an internal time keeping system) regulates longevity in mammals, but the molecular mechanisms are not known. The aim of our current study is to investigate a possible interconnection between the circadian clock and mTORC1 (mammalian target of Rapamycin) signaling pathway. mTORC1 pathway is a nutrient response pathway involved in many cellular processes many recent studies indicate a role of mTORC1 pathway in aging. Here we demonstrate that circadian system regulates mTORC1 …


Trypanosoma Brucei Telomere Functions In Antigenic Variation, Unnati M. Pandya Jan 2014

Trypanosoma Brucei Telomere Functions In Antigenic Variation, Unnati M. Pandya

ETD Archive

Trypanosoma brucei is a protozoan parasite that causes sleeping sickness in humans and Nagana in cattle. They evade the host's immune defense by periodically switching their major surface antigen, variant surface glycoprotein (VSG), a phenomenon termed antigenic variation. Inside its mammalian host, bloodstream form (BF) T. brucei monoallelically expresses its major surface molecule VSG from the VSG Expression Sites (ESs) located at subtelomeric loci. Monoallelic VSG expression ensures effective antigenic variation and maximizes the efficiency of T. brucei pathogenesis. In the mid-gut of its insect host (tsetse), procyclic form (PF) T. brucei expresses procyclins as the major surface molecules and …


Study Of Role Of Ribosomal Protein L13a In Resolving Inflammation, Darshana Poddar Jan 2014

Study Of Role Of Ribosomal Protein L13a In Resolving Inflammation, Darshana Poddar

ETD Archive

Inflammation is an obligatory attempt of the host immune system to protect the body against infection. However, unregulated synthesis of pro-inflammatory products can have detrimental effects. Though mechanisms which contribute to inflammation are well appreciated, those that resolve inflammation are poorly understood. Therefore, understanding the molecular basis of such pathways will provide an entirely novel approach to treat and prevent inflammatory diseases. Transcript-selective translational control can regulate the expression of a set of inflammatory genes. We have identified one such mechanism in a novel animal model which relies on the abrogation of ribosomal protein L13a-dependent translational silencing by creating macrophage-specific …


Role Of Mtorc1 And Autophagy In The Regulation Of Chemoresistance In Leukemic B-Cells, Arishya Sharma Jan 2014

Role Of Mtorc1 And Autophagy In The Regulation Of Chemoresistance In Leukemic B-Cells, Arishya Sharma

ETD Archive

Deregulated mTORC1 contributes to tumorigenesis and chemoresistance. However, mTORC1-specific inhibitors (rapalogs) show modest efficacy in the clinic, as they unleash the feedback inhibition on upstream, prosurvival pathways. An alternative approach is to target downstream functions of mTORC1. We investigated acquired resistance to fludarabine (Flu), a purine analog, active agent for chronic lymphocytic leukemia (CLL). Elevated phospho-p70S6k (T389), an mTORC1 activation marker, predicted Flu resistance in a panel of B-cell tumor lines, and primary CLL cells. However, the rapalogs induced moderate cell death in Flu-resistant (FluR) and primary CLL cells. Activation of oncogenic pathways, including mTORC1, induces profound metabolic reprogramming to …


Combinatorial Activation Of Stat3 By Egf And Thrombin In Endothelial Cells, Matthew S. Waitkus Jan 2014

Combinatorial Activation Of Stat3 By Egf And Thrombin In Endothelial Cells, Matthew S. Waitkus

ETD Archive

Endothelial cells line the luminal surface of blood vessels and form a regulatory interface between the bloodstream and underlying tissues. The endothelium responds to diverse, and potentially conflicting, environmental signals to regulate vessel growth, leukocyte adhesion, thrombogenicity, and vascular tone. Signaling pathways may interact, or "crosstalk," in combinatorial signaling environments to enable cells to process disparate extracellular information at downstream signaling nodes and formulate appropriate biological responses based on combinations of extracellular stimuli. We have reported that simultaneous stimulation of endothelial cells with EGF and thrombin synergistically induces expression of immediate early genes (IEGs) associated with growth and angiogenesis. We …


Conformational Regulation Of Membrane Localization And Activation Of Talin, Pallavi Dwivedi Jan 2014

Conformational Regulation Of Membrane Localization And Activation Of Talin, Pallavi Dwivedi

ETD Archive

Talin is a cytosolic protein which is known to be one of the key players involved in integrin mediated cell adhesion dependent processes, including blood coagulation, and tissue remodeling. It connects the extracellular matrix with the actin cytoskeleton. Talin comprises of a head domain (talin-H) and a rod domain (talin-R). Talin-H is further subdivided in F0, F1, F2 and F3 domains. Talin-R contains 13 contiguous helical bundle domains (R1-R13) followed by an actin binding dimerization domain (DD). The F3 domain contains a key integrin binding site that regulates integrin activation. In our previous studies, we have shown that cytosolic talin …


Mitochondrial Dna Variation In The Eastern Pondmussel, Ligumia Nasuta (Bivalvia: Unionoida), In The Great Lakes Region, Mariah Wild Scott, Matthew T. Begley, Robert A. Krebs, David T. Zanatta Jan 2014

Mitochondrial Dna Variation In The Eastern Pondmussel, Ligumia Nasuta (Bivalvia: Unionoida), In The Great Lakes Region, Mariah Wild Scott, Matthew T. Begley, Robert A. Krebs, David T. Zanatta

Biological, Geological, and Environmental Faculty Publications

Most freshwater mussel species in the Great Lakes colonized the region from the Mississippi River basin and few appear to have colonized from Atlantic coast rivers. The Eastern Pondmussel, Ligumia nasuta, is widespread along the Atlantic coast but occurs elsewhere only in the Great Lakes, suggesting that it is one of the few Great Lakes species of Atlantic origin. Great Lakes populations are now imperiled following invasion of the lakes by dreissenid mussels. We examined patterns of diversity in the mitochondrial CO1 and ND1 genes in L. nasuta populations in the Great Lakes and in Atlantic coast rivers. Genetic diversity …