Biology Commons^™

Modelling Non-Euclideanmovement And Landscape Connectivity In Highly Structured Ecological Networks, Chris Sutherland, Angela Fuller, J. Royle

Chris Sutherland

Regulation Of Three Nitrogenase Gene Clusters In The Cyanobacterium Anabaena Variabilis Atcc 29413, Teresa Thiel, Brenda S. Pratte

Teresa Thiel

Cloning And Expression Analysis Of Drosophila Extracellular Cu Zn Superoxide Dismutase, Michael J. Blackney, Rebecca Cox, David Shepherd, Joel D. Parker

Joel D Parker

In the present study, we cloned and sequenced the mRNAs of the Sod3 [extracellular Cu Zn SOD (superoxide dismutase)] gene in Drosophila and identified two mRNA products formed by alternative splicing. These products code for a long and short protein derived from the four transcripts found in global expression studies (Flybase numbers Dmel\CG9027, FBgn0033631). Both mRNA process variants contain an extracellular signalling sequence, a region of high homology to the Sod1 (cytoplasmic Cu Zn SOD) including a conserved AUG start, with the longer form also containing a hydrophobic tail. The two fully processed transcripts are homologous to Caenorhabditis elegans Sod3 …

Climate Change Enhances The Negative Effects Of Predation Risk On An Intermediate Consumer, Luke P. Miller, Catherine M. Matassa, Geoffrey C. Trussell

Luke P. Miller

Predators are a major source of stress in natural systems because their prey must balance the benefits of feeding with the risk of being eaten. Although this ‘fear’ of being eaten often drives the organization and dynamics of many natural systems, we know little about how such risk effects will be altered by climate change. Here, we examined the interactive consequences of predator avoidance and projected climate warming in a three-level rocky intertidal food chain. We found that both predation risk and increased air and sea temperatures suppressed the foraging of prey in the middle trophic level, suggesting that warming …

Why Gluten Changed The World, Laura K. Thompson Dr

Laura K Thompson Dr

This laboratory is one in a series that I use in Biology 401: Applied Plant Science. This course is designed for students who have had at least one introductory Biology course, either for a major or a non-major. The goal in the course is to give the student an appreciation for the importance of plants to human society. Each laboratory session is designed to give the student an appreciation for how plants contribute to society and an experience in original processing of plants for their use. In this laboratory session we look at the importance of gluten in bread making. …

Food Preservation, Laura K. Thompson Dr

Laura K Thompson Dr

This laboratory is one in a series that I use in Biology 401: Applied Plant Science. This course is designed for students who have had at least one introductory Biology course, either for a major or a non-major. The goal in the course is to give the student an appreciation for the importance of plants to human society. Each laboratory session is designed to give the student an appreciation for how plants contribute to society and an experience in original processing of plants for their use. In this laboratory session we look at different methods for preserving food, primarily canning …

Working With Plant Fibers, Laura K. Thompson Dr

Laura K Thompson Dr

This laboratory is one in a series that I use in Biology 401: Applied Plant Science. This course is designed for students who have had at least one introductory Biology course, either for a major or a non-major. The goal in the course is to give the student an appreciation for the importance of plants to human society. Each laboratory session is designed to give the student an appreciation for how plants contribute to society and an experience in original processing of plants for their use. In this laboratory session the students get a feel for the processes that are …

Herbal Medicines, Laura K. Thompson Dr

Laura K Thompson Dr

This laboratory is one in a series that I use in Biology 401: Applied Plant Science. This course is designed for students who have had at least one introductory Biology course, either for a major or a non-major. The goal in the course is to give the student an appreciation for the importance of plants to human society. Each laboratory session is designed to give the student an appreciation for how plants contribute to society and an experience in original processing of plants for their use. A number of lectures in the course deal with the use of plants in …

Mulberry Paper Making, Laura K. Thompson Dr

Laura K Thompson Dr

This laboratory is one in a series that I use in Biology 401: Applied Plant Science. This course is designed for students who have had at least one introductory Biology course, either for a major or a non-major. The goal in the course is to give the student an appreciation for the importance of plants to human society. Each laboratory session is designed to give the student an appreciation for how plants contribute to society and an experience in original processing of plants for their use. This laboratory session allows students to learn about how paper was originally produced. I …

Thermal Stress And Predation Risk Trigger Distinct Transcriptomic Responses In The Intertidal Snail Nucella Lapillus, Nathaniel D. Chu, Luke P. Miller, Stefan T. Kaluziak, Geoffrey C. Trussell, Steven V. Vollmer

Luke P. Miller

Thermal stress and predation risk have profound effects on rocky shore organisms, triggering changes in their feeding behaviour, morphology and metabolism. Studies of thermal stress have shown that underpinning such changes in several intertidal species are specific shifts in gene and protein expression (e.g. upregulation of heat-shock proteins). But relatively few studies have examined genetic responses to predation risk. Here, we use next-generation RNA sequencing (RNA-seq) to examine the transcriptomic (mRNA) response of the snail Nucella lapillus to thermal stress and predation risk. We found that like other intertidal species, N. lapillus displays a pronounced genetic response to thermal stress …

Neurogenic Stem Cells Have The Capacity To Disperse Widely And Fuse With Host Neurons In Adult Rats, Kerry Thompson, Emily Kimes, Michele Kanemori, Daniella Amri, Ashley Noone, Jerika Barron, Ashley Saito, Omar Cortez-Toledo, Ellie Cortez-Toledo, David Arrizon, Johanna Quist, Yohualli Balderas, Melissa Miranda, Tina Tran, Frances Kim

Kerry Thompson

No abstract provided.

Next-Generation Field Guides, Elizabeth J. Farnsworth, Miyoko Chu, W. John Kress, Amanda K. Neill, Jason H. Best, John Pickering, Robert D. Stevenson, Gregory W. Courtney, John K. Vandyk, Aaron M. Ellison

John K. VanDyk

To conserve species, we must first identify them. Field researchers, land managers, educators, and citizen scientists need up-to-date and accessible tools to identify organisms, organize data, and share observations. Emerging technologies complement traditional, book-form field guides by providing users with a wealth of multimedia data. We review technical innovations of next-generation field guides, including Web-based and stand-alone applications, interactive multiple-access keys, visual-recognition software adapted to identify organisms, species checklists that can be customized to particular sites, online communities in which people share species observations, and the use of crowdsourced data to refine machine-based identification algorithms. Next-generation field guides are user …

An Rnai-Based Suppressor Screen Identifies Interactors Of The Myt1 Ortholog Of Caenorhabditis Elegans, Anna K. Allen, Jessica E. Nesmith, Andy Golden

Anna Allen

Maldi-Tof Ms As A Supportive Tool For The Evaluation Of Bacterial Diversity In Soils From Africa And The Americas, Adrian Douglas Allen, Maria Velez-Quinones, Broderick Eribo, Vernon Morris

Broderick Eribo

Neonatal Nmda Receptor Blockade Disrupts Spike Timing And Glutamatergic Synapses In Fast Spiking Interneurons In A Nmda Receptor Hypofunction Model Of Schizophrenia, Kevin S. Jones, Joshua G. Corbin, Molly M. Huntsman

Kevin Jones

African Philosophy: A Key To African Innovation And Development, George Middendorf

George Middendorf

Mcnamara 20140911 Bepress Author Utilization Counts Cannot Be Trusted Due To Poor Design And Support, George Mcnamara

George McNamara

McNamara 20140911 Bepress author utilization counts cannot be trusted due to poor design and support

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20140912 update: bepress support finally 'gets' my problem and should have my author counts fixed soon.

I have left the text below and the original download as is.

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Email exchange 9/2014 (also available as a PDF download):

Your bepress system “database” is pretty lame if there is no way for your team to correct this ‘bot inflation.

You are serving an academic research community that has a very high expectation in the quality of our scholarship and data. That you cannot correct “bad …

Diversity At 100: Women And Underrepresented Minorities In The Esa: Peer-Reviewed Letter, George Middendorf

George Middendorf

No abstract provided.

The Chevrolet Cruze Luv 1.4 Engine, Gabriel Leiner

Gabriel Leiner

In the future, this research suggests that designing highways and cars with features built into the structures of the roads themselves that implicitly influence typical drivers to achieve better fuel economy without making an active effort. These types of “intuitively” fuel efficient highways and cars are proposed, defined and modeled within the scope of this paper.

Cryopreservation Of Hepatocyte (Hepg2) Cell Monolayers: Impact Of Trehalose, Blake Stokich, Quinn Osgood, David Grimm, Shhyam Moorthy, Nilay Chakraborty, Michael A. Menze

Michael Menze

A simple method to cryogenically preserve hepatocyte monolayers is currently not available but such a technique would facilitate numerous applications in the field of biomedical engineering, cell line development, and drug screening. We investigated the effect of trehalose and dimethyl sulfoxide (Me2SO) in cryopreservation of human hepatocellular carcinoma (HepG2) cells in suspension and monolayer formats. HepG2 cell monolayers were incubated for 24 h at varying concentrations of trehalose (50–150 mM) prior to cryopreservation to identify the optimum concentration for such preincubation. When trehalose alone was used as the cryoprotective agent (CPA), cells in monolayer format did not survive freezing while …

Enhancement Of Chronically Induced Breast Carcinogenesis By Combined Environmental And Dietary Carcinogens And Suppression By Dietary Agents, Lenora A. Pluchino Ph.D.

Lenora A. Pluchino, Ph.D.

Most breast cancers occur sporadically due to long-term exposure to low-dose carcinogens present in our environment and diet. American lifestyles involve frequent exposures to smoke, polluted air, and high temperature-cooked meats comprising multiple carcinogens, such as 4-(methylnitrosamino)-1-(3-pyridyl)-1-butanone (NNK), benzo[α[alpha]]pyrene (B[α[alpha]]P), and 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP). To investigate whether these carcinogens may act together to enhance breast cell carcinogenesis, we used our chronically-induced breast cell carcinogenesis model wherein we repeatedly expose non-cancerous human breast epithelial MCF10A cells to physiologically-achievable doses of carcinogens to progressively induce cellular acquisition of cancer-associated properties including reduced dependence on growth factors, anchorage-independent growth, increased cell proliferation, migration and …

Mathematical Structure Of Fuzzy Modeling Of Medical Diagnoses By Using Clustering Models, R.W. W. Hndoosh

R. W. Hndoosh

An Adaptive-Network-based Fuzzy Inference System ANFIS with different techniques of clustering is successfully developed to solve one of the problems of medical diagnoses, because it has the advantage of powerful modeling ability. In this paper, we propose the generation of an adaptive neuro-Fuzzy Inference System model using different clustering models such as a subtractive fuzzy clustering (SFC) model and a fuzzy c-mean clustering (FCM) model in the Takagi-Sugeno (TS) fuzzy model for selecting the hidden node centers. An experimental result on datasets of medical diagnoses shows the proposed model with two models of clustering (ANFIS-SFC & ANFIS-FCM) while comparing the …

Global Population-Specific Variation In Mirna Associated With Cancer Risk And Clinical Biomarkers, Renata A. Rawlings-Goss, Michael C. Campbell, Sarah A. Tishkoff

Michael C. Campbell

An Inverse Association Between West Nile Virus Serostatus And Avian Malaria Infection Status, Robert Ricklefs, Matthew Ci Medeiros, Tavis K. Anderson, Jenni M. Higashiguchi, Uriel D. Kitron, Edward D. Walker, Jeffrey D. Brawn, Bethany L. Krebs, Marilyn O. Ruiz, Tony L. Goldberg, Gabriel L. Hamer

Robert Ricklefs

Cholinergic Transmission During Nicotine Withdrawal Is Influenced By Age And Pre-Exposure To Nicotine: Implications For Teenage Smoking, Laura O'Dell

Laura Elena O'Dell

Adolescence is a unique period of development characterized by enhanced tobacco use and long-term vulnerability to neurochemical changes produced by adolescent nicotine exposure. In order to understand the underlying mechanisms that contribute to developmental differences in tobacco use, this study compared changes in cholinergic transmission produced by exposure to nicotine and withdrawal from nicotine in rats of different ages, some of which had exposure to nicotine as adolescents. The first study compared extracellular levels of acetylcholine (ACh) in the nucleus accumbens (NAcc) during nicotine withdrawal in adolescent, adult and adult rats that were exposed to nicotine during adolescence. Adolescent (PND …

Insulin-Resistant Rats Display Enhanced Nicotine Reward Following A High-Fat Diet Regimen., Laura O'Dell

Laura Elena O'Dell

Tobacco use among persons displaying type II diabetes exponentially increases negative health consequences and mortality rates. Especially troubling, diabetic persons who smoke display reduced rates of tobacco cessation as compared to non-diabetic smokers. Diabetes is a metabolic syndrome that consists of insulin resistance due to disruptions in insulin signaling. Insulin has been shown to modulate mesolimbic reward circuitry in response to drugs of abuse, such as nicotine. This study utilized the conditioned place preference paradigm (CPP) to examine nicotine reward in a rat model of insulin resistance induced by the consumption of a high-fat diet (HFD). Rats were placed on …

What Can We Learn From Confusing Olivella Columellaris And O. Semistriata (Olivellidae, Gastropoda), Two Key Species In Panamic Sandy Beach Ecosystems?, Alison I. Troost, Samantha D. Rupert, Ariel Z. Cyrus, Frank V. Paladino, Benjamin F. Dattilo, Winfried S. Peters

Benjamin F. Dattilo

Abstract: Olivella columellaris (Sowerby 1825) and O. semistriata (Gray 1839) are suspension-feeding, swash-surfing snails on tropical sandy beaches of the east Pacific. While they often are the numerically dominant macrofaunal element in their habitats, their biology is poorly understood; the two species actually have been confused in all of the few publications that address their ecology. Frequent misidentifications in publications and collections contributed also to an overestimation of the geographic overlap of the two species. To provide a sound taxonomic basis for further functional, ecological, and evolutionary investigations, we evaluated the validity of diagnostic traits in wild populations and museum …

The Fossilized Birth–Death Process For Coherent Calibration Of Divergence-Time Estimates, Tracy A. Heath, John P. Huelsenbeck, Tanja Stadler

Tracy Heath

Identification Of Heat Responsive Genes In Brassica Napus Siliques At The Seed-Filling Stage Through Transcriptional Profiling, Xuemin Wang, Erru Yu, Chuchuan Fan, Qingyong Yang, Xiaodong Li, Bingxi Wan, Yanni Dong, Yongming Zhou

Xuemin (Sam) Wang

Letters + Numbers = Symbols, Gabriel Leiner

Gabriel Leiner