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Articles 1 - 20 of 20
Full-Text Articles in Biology
Spatio-Temporal Dynamics Of Fungal Communities And Their Effects On Plants, Kel Cook
Spatio-Temporal Dynamics Of Fungal Communities And Their Effects On Plants, Kel Cook
Biology ETDs
Fungi perform several critical functions in the environment. Spatiotemporal distributions of fungal communities will mediate when and where these functions happen and how they vary across the landscape. I first explored tropical tree canopy fungal community variation at small spatial scales and documented near total turnover of fungi across sub-meter distances and among adjacent substrates. The second chapter analyzed fungal turnover over the course of three years, where community stability was driven primarily by abundant fungi. In the third chapter, I tested effects of the environment, including host plant and habitat, on canopy fungal communities and found only small effects, …
Transgenerational Plasticity Causes Differences In Uv-Tolerance Of Intertidal And Subtidal Populations Of The Purple Sea Urchin, Strongylocentrotus Purpuratus, Yareli Alvarez, Nikki L. Adams
Transgenerational Plasticity Causes Differences In Uv-Tolerance Of Intertidal And Subtidal Populations Of The Purple Sea Urchin, Strongylocentrotus Purpuratus, Yareli Alvarez, Nikki L. Adams
Master's Theses
Planktonic larvae of marine organisms are increasingly being exposed and required to respond to a changing physical environment. Adult sea urchins occupy both intertidal and subtidal waters and broadcast spawn gametes into the water column to contend with variable physical conditions. To answer how populations of invertebrates residing at different depths adequately prepare their offspring to cope with different levels of ultraviolet radiation (UVR), we collected adult purple sea urchins, Strongylocentrotus purpuratus, from four sites (two intertidal and two subtidal (~15 m deep)) on the central coast of CA to compare UV tolerance in offspring. Our measurements of UVA …
Structure And Evolution Of Lizard Immunity Genes, Trent Santonastaso
Structure And Evolution Of Lizard Immunity Genes, Trent Santonastaso
University of New Orleans Theses and Dissertations
One of the most important gene families to play a role in adaptive immunity is the major histocompatibility complex (MHC). MHC class II loci are considered to be the most variable loci in the vertebrate genome, and studies have shown that this variability can be maintained through complex co-evolutionary dynamics between host and parasite. Despite the rich body of research into the MHC, there is comparatively little understanding of its genomic architecture in reptiles. Similarly, loci associated with innate immunity have received little attention in reptiles compared to other vertebrates. In the first chapter, we investigated the structure and organization …
Chronoecology Of A Cave-Dwelling Orb-Weaver Spider, Meta Ovalis (Araneae: Tetragnathidae), Rebecca Steele
Chronoecology Of A Cave-Dwelling Orb-Weaver Spider, Meta Ovalis (Araneae: Tetragnathidae), Rebecca Steele
Electronic Theses and Dissertations
Circadian clocks enable coordination of essential biological and metabolic processes in relation to the 24-hour light cycle. However, there are many habitats that are not subject to this light cycle, such as the deep sea, arctic regions, and cave systems. This study analyzes the circadian pattern of isolated populations of a subterranean spider, Meta ovalis from two Tennessee caves and five Indiana caves. Locomotor activity was recorded with TriKinetics LAM50 Locomotor Activity Monitor under a 12-hour light (L), 12-hour dark (D) (LD 12:12) cycle preceding total darkness (DD). Significant differences were found within and among populations found in Tennessee cave …
Evolutionary Ecology Of Host-Parasite Relationships: Role Of Host Ecology, Phylogeny, And Demographics In Shaping Parasite Evolution, Erika Taylor Gendron
Evolutionary Ecology Of Host-Parasite Relationships: Role Of Host Ecology, Phylogeny, And Demographics In Shaping Parasite Evolution, Erika Taylor Gendron
Biology ETDs
Host-parasite systems exist across complex and ecologically heterogeneous landscapes, and may occur across taxonomically and ecologically disparate host species. Under these conditions, mechanisms underlying microevolutionary processes (i.e. gene flow, genetic drift) are not always clear, and may be mediated by numerous co-occurring factors specific to individual hosts. Host traits such as host immunology, demographics, phylogeny and ecology may act in concert to shape host-parasite relationships, and ultimately evolutionary processes. The research described herein used phylogeographic, phylogenomic, and population genetic methods to further understanding of how host traits impact the evolutionary ecology of trematode systems, using avian schistosomes (Digenea: Schistosomatidae) as …
Driver Of Avian Haemosporidian Diversity And Host Specificity In The Solomon Islands, Xena Marie Mapel
Driver Of Avian Haemosporidian Diversity And Host Specificity In The Solomon Islands, Xena Marie Mapel
Biology ETDs
Avian haemosporidians are protist parasites that are distributed worldwide. We investigated these parasites in a tropical South Pacific archipelago to answer two questions: 1) Which community characteristics influence haemosporidian diversity; 2) Does host specificity vary across islands? To answer these questions we sequenced a mitochondrial gene and created linear models to establish relationships between select variables and diversity. In addition, we calculated host breadth of each lineage and constructed models to infer predictors of diversity. The percent of infected individuals on each island was correlated with island area. Haemosporidian phylogenetic diversity on a given island was associated with the proportion …
Improving Growth And Survival Of Cultured Yellow Lampmussel (Lampsilis Cariosa) For Restoring Populations, Virginia Martell
Improving Growth And Survival Of Cultured Yellow Lampmussel (Lampsilis Cariosa) For Restoring Populations, Virginia Martell
Masters Theses
In North America 72% of freshwater mussel species are endangered, threatened, or of special concern due to factors such as habitat loss and degradation, biological invasion, and land use change. Propagation of freshwater mussels has been considered a necessary conservation strategy for population restoration where threats have been mitigated but small population sizes limit population viability. Yellow lampmussel is a species of freshwater mussel that is endangered, threatened, or imperiled throughout its range; therefore, I evaluated laboratory techniques (probiotic supplements and secondary rearing designs) to improve culture of yellow lampmussel for population restoration. Several aquaculture facilities commonly use probiotics; thus, …
Ticks On Lizards: Parasite-Host Interactions Of The Southern Alligator Lizard (Elgaria Multicarinata) In Washington State, Emma Houghton
Ticks On Lizards: Parasite-Host Interactions Of The Southern Alligator Lizard (Elgaria Multicarinata) In Washington State, Emma Houghton
All Undergraduate Projects
I investigated interactions between ectoparasites (ticks) and their host, the southern alligator lizard (Elgaria multicarinata). Alligator lizards are capable of complement-mediated killing of the Lyme disease spirochete carried by ticks and may potentially reduce Lyme disease prevalence by cleansing pathogenic organisms from ticks. Despite this, little is known about host-parasite dynamics in alligator lizards. My goals were to 1) assess patterns of tick presence (i.e. parasite load) on alligator lizards and 2) investigate potential negative effects of ticks on alligator lizards. I sampled lizards during the summer of 2019 near Catherine Creek, along the Columbia River Gorge in southern Washington. …
The Effect Of Seasonality On Yellow Perch Ecology And Ecotoxicology Within Lake Manganese, Bailey Duxbury
The Effect Of Seasonality On Yellow Perch Ecology And Ecotoxicology Within Lake Manganese, Bailey Duxbury
Dissertations, Master's Theses and Master's Reports
Seasonality is a consistent component of aquatic ecosystems yet most fish biological and ecotoxicological studies commonly employ field sampling protocols focused during the warm open water season with minimal emphasis placed on winter sampling, especially for north-temperate latitude ecosystems. Such strategies limit our understanding of poikilotherm biology and ecology during the overwintering seasons. Here, I investigated seasonal changes in yellow perch (Perca flavescens) biology, ecology and ecotoxicology over a one-year period in Lake Manganese. Significant seasonality was observed for metrics including fish energy densities (kJ/g), gonadosomatic indices, whole-body lipid contents, and carbon stable isotope values (δ13C). …
Effects Of Abiotic Factors On Host Plant Quality And Community Structure Of The Parasitoid Guild That Attacks Asphondylia Borrichiae Midges On Borrichia Frutescens, Kevin Orta
UNF Graduate Theses and Dissertations
Asphondylia borrichiae is a gall-inducing insect that attacks its ancestral host plant Borrichia frutescens: through ovipositional mistakes it has acquired two additional hosts, Iva frutescens and Iva imbricata. Oviposition results in the formation of a gall, a tumor-like growth of plant tissue within which immature A. borrichiae develop. During development, immature A. borrichiae, are attacked by a suite of four generalist hymenopteran parasitoids. Of these, Galeopsomyia haemon and Torymus umbilicatus are facultative hyperparasitoids, more common and exhibit non-random attack patterns. In the present study, soil quality was manipulated through bi-weekly application of either ammonium nitrate fertilizer or sodium …
The Evolution Of Dragons, Laura J. Mayfield
The Evolution Of Dragons, Laura J. Mayfield
Undergraduate Theses, Professional Papers, and Capstone Artifacts
Dragons have been depicted in human art as early as 4500 BCE. For centuries, these fantasy creatures have inspired countless folk and fantasy tales, as well as appearing in the art of different cultures around the world. Now there are thousands of different depictions of these huge, flying, fire-breathing lizards, but are any of them possible? In this study, I reference peer-reviewed scientific articles, phylogenetic analysis, and paleoart studies to create biologically-sound dragons. Basing the dragon lineage on a real branch of webbed-winged scansoriopterygids—an extinct family of climbing and gliding maniraptoran dinosaurs—I explored the possible wing-structure, fire-breathing abilities, and effects …
Heat For The Masses: Thermal Ecology Of The Western Tent Caterpillar, Victoria Dahlhoff
Heat For The Masses: Thermal Ecology Of The Western Tent Caterpillar, Victoria Dahlhoff
Graduate Student Theses, Dissertations, & Professional Papers
A unique feature of some gregarious, colonial insects is their ability to create external structures that alter environmental conditions for the entire (often family) group. A combination of physical alteration of local microhabitats and behavioral thermoregulation allows many of these animals to actively control their body temperatures, which allows them to regulate energy use and metabolism in variable thermal environments. Here I describe mechanisms of microhabitat modification and thermal regulation in the western tent caterpillar, Malacosoma californicum pluviale. Tent caterpillars build communal silk tents, whose temperatures can rise substantially above ambient air temperature. I experimentally manipulated colony sizes and examined …
Predator-Based Selection And The Impact Of Edge Sympatry On Components Of Coralsnake Mimicry, Lauren E. Wilson
Predator-Based Selection And The Impact Of Edge Sympatry On Components Of Coralsnake Mimicry, Lauren E. Wilson
Electronic Theses and Dissertations
Studying warning coloration and mimicry is an effective way to understand predator-driven selection and phenotypic diversity. The presence (sympatry) or absence (allopatry) of a toxic model plays a role in shaping mimetic phenotypes. However, the impact of edge sympatry and allopatry on predation of mimetic phenotypes is not well understood. We studied coralsnake mimicry to test how edge sympatry and allopatry affect predation on mimetic phenotypes. Specifically, we tested 1) if overall attack rates varied with edge sympatry of coralsnakes 2) which color patterns conferred a fitness advantage 3) which specific mimetic signal components are important in driving predatory attacks …
Diet Of A Recently Reintroduced River Otter (Lontra Canadensis) Population In Taos County, New Mexico, Gabriela Alexandra Wolf-Gonzalez
Diet Of A Recently Reintroduced River Otter (Lontra Canadensis) Population In Taos County, New Mexico, Gabriela Alexandra Wolf-Gonzalez
Theses and Dissertations--Forestry and Natural Resources
North American river otters (Lontra canadensis), native to every U.S. state and Canada, experienced extensive population decreases and range reduction until the mid-20th century as a result of overexploitation and habitat loss during European colonization. The last known river otter in New Mexico was killed on the Gila River in 1953, although unverified reports continued thru 2008. After a nearly 60-year absence from New Mexico, 33 adult river otters were reintroduced to the Rio Pueblo de Taos in the northern part of the state between 2008-2010; however, they were not subsequently monitored or studied. I characterized diet of …
Multivariate Habitat-Based Predictive Modeling Of Three Demersal Rockfish Species In Central California, Georgia R. Martel
Multivariate Habitat-Based Predictive Modeling Of Three Demersal Rockfish Species In Central California, Georgia R. Martel
Cal Poly Humboldt theses and projects
Accurate, spatially explicit models of rockfish abundance are critical in implementing ecosystem-based management strategies and designating essential fish habitats and marine protected areas. Multibeam bathymetry methods and visual, non-extractive submersible transect surveys were combined to collect environmental variables and fish abundance data at three distinct sites within the study region. Zero-adjusted models were developed using habitat classification analyses of high-resolution (5 m) digital elevation models. Model accuracies were assessed by using a reserved subset of the original datasets. To demonstrate that a model’s predictive power was linked to its spatial origins, Mean Absolute Error and coefficient of determination values were …
Ticks On Lizards: Parasite-Host Interactions Of The Southern Alligator Lizard (Elgaria Multicarinata) In Washington State, Emma Houghton
Ticks On Lizards: Parasite-Host Interactions Of The Southern Alligator Lizard (Elgaria Multicarinata) In Washington State, Emma Houghton
Undergraduate Honors Theses
I investigated interactions between ectoparasites (ticks) and their host, the southern alligator lizard (Elgaria multicarinata). Alligator lizards are capable of complement-mediated killing of the Lyme disease spirochete carried by ticks and may potentially reduce Lyme disease prevalence by cleansing pathogenic organisms from ticks. Despite this, little is known about host-parasite dynamics in alligator lizards. My goals were to 1) assess patterns of tick presence (i.e. parasite load) on alligator lizards and 2) investigate potential negative effects of ticks on alligator lizards. I sampled lizards during the summer of 2019 near Catherine Creek, along the Columbia River Gorge in southern Washington. …
Investigating The Avian Species Composition, Diversity, And Abundance Of Engelhorn Pond, Kiana Rose
Investigating The Avian Species Composition, Diversity, And Abundance Of Engelhorn Pond, Kiana Rose
Undergraduate Honors Theses
Central Washington University’s Engelhorn Pond contains important habitats for many organisms, particularly migratory birds, and is a valuable resource for students. However, little information is available about the wildlife inhabiting the pond. The pond’s discrete location means that many people are unaware of its existence. In addition, the pond is threatened by a number of anthropogenic sources, including chemical runoff, garbage, and feral cats. By using point counts, a common ornithological survey technique, I recorded the bird species present at the pond during all seasons of the year. I collected data using point counts during 13 visits from June of …
Plasticity And The Impact Of Increasing Temperature On A Tropical Ectotherm, Adam A. Rosso
Plasticity And The Impact Of Increasing Temperature On A Tropical Ectotherm, Adam A. Rosso
Electronic Theses and Dissertations
Organisms may respond to climate change through behavior, genetic adaptation, and/or phenotypic plasticity. Tropical ectotherms are thought to be especially vulnerable to climate change because most have a narrow range of thermal tolerance while living close to their upper thermal tolerance limits. Additionally, many tropical species live in closed-canopy forests, which provide homogenous thermal landscapes that prevent behavioral compensation for stressfully warm temperatures. Finally, tropical ectotherms are thought to have decreased capacity for phenotypic plasticity because they have evolved in thermally stable environments. We tested gene expression patterns and phenotypic plasticity in the Panamanian slender anole by a) measuring changes …
Can Zooplankton On The North American Great Plains ‘Keep Up’ With Climate-Driven Salinity Change?, Mariam Elmarsafy
Can Zooplankton On The North American Great Plains ‘Keep Up’ With Climate-Driven Salinity Change?, Mariam Elmarsafy
Theses and Dissertations (Comprehensive)
The Great Plains of North America are projected to become more arid as the climate changes over the next century. Salinity levels for lakes in this region are linked to climate, suggesting that lakes will become more saline as the climate becomes drier. One group of organisms that might be affected by increased salinity levels are the zooplankton, aquatic invertebrates that transfer energy from primary producers to macroinvertebrates and fish. Little is known about the ability of zooplankton to adapt to long-term increases in lake salinity levels. For my thesis, I used resurrection ecology to examine how a common zooplankter, …
High-Throughput Two-Stage Dereplication Of Cave Bacteria To Discover Novel Antibiotic Compounds, Alexander Archey
High-Throughput Two-Stage Dereplication Of Cave Bacteria To Discover Novel Antibiotic Compounds, Alexander Archey
Williams Honors College, Honors Research Projects
Since their discovery over a century ago, antibiotics have been a staple of combating infectious diseases. However, bacteria develop resistance to antibiotics through a variety of mechanisms. Efforts to identify new antibiotics often fail by discovering already-known antibiotics, or failing to synthesize new antibiotics that are safe for clinical use. The aim of this research was to dereplicate bacteria- to screen for antibiotic production in- normally isolated in cave ecosystems. Using two new technologies, the Antibiotic Resistance Platform (ARP) and a data acquisition and bioinformatics technique (IDBac), my dereplicating method allowed high throughput of bacterial screening for antibiotics. In this …