Biology Commons^™

The Variation Of Productivity And Its Allocation Along A Tropical Elevation Gradient: A Whole Carbon Budget Perspective, Yadvinder Malhi, Cécile A. J. Girardin, Gregory R. Goldsmith, Christopher E. Doughty, Norma Salinas, Daniel B. Metcalfe, Walter Huaraca Huasco, Javier E. Silva-Espejo, Jhon Del Aguilla-Pasquell, Filio Farfán Amézquita, Luiz E.O.C. Aragão, Rossella Guerrieri, Françoise Yoko Ishida, Nur Bahar, William Farfan-Rios, Oliver L. Phillips, Patrick Meir, Miles Silman

Biology, Chemistry, and Environmental Sciences Faculty Articles and Research

• Why do forest productivity and biomass decline with elevation? To address this question, research to date generally has focused on correlative approaches describing changes in woody growth and biomass with elevation.
  
  
• We present a novel, mechanistic approach to this question by quantifying the autotrophic carbon budget in 16 forest plots along a 3300 m elevation transect in Peru.
  
  
• Low growth rates at high elevations appear primarily driven by low gross primary productivity (GPP), with little shift in either carbon use efficiency (CUE) or allocation of net primary productivity (NPP) between wood, fine roots and canopy. The lack of trend in …

Do Novel Weapons That Degrade Mycorrhizal Mutualisms Explain Invasive Species Success?, Philip L. Pinzone Mr.

Biology Theses

Invasive plants often dominate novel habitats where they did not co-evolve with local species. Several hypotheses suggest mechanisms that explain increased exotic plant success, including 'novel weapons' and 'degraded mutualisms'. Japanese knotweed (Fallopia japonica) and European buckthorn (Rhamnus cathartica) are widespread plant invaders in North America that can dominate ecosystems. The goal of this study is to test whether these impacts are more consistent with novel weapons or degraded mutualism hypotheses. I examine tree seedling recruitment, (germination and initial survival) growth, (biomass) and mycorrhizal invasion (AMF content) as a function of F. japonica and R. cathartica …

Effects Of Fire On Soil Co₂ Efflux In A Mature Longleaf Pine Forest, Knox Lemee Flowers

Master's Theses

This study was conducted from 2012-2013 in a 96 year old longleaf pine at the Lake Thoreau Environmental Center located Lamar County, MS. Measurements of soil CO₂ efflux (i.e., soil respiration or SR) rates (µmol m^-2 sec^-1) were taken across 8 field plots (4 burned, 4 unburned) before and after a prescribed fire on that occurred in May, 2012. These measurements were taken over diurnal cycles using a LICOR LI-8100A automated soil gas flux system with long term chambers. SR rates and soil temperature measurements were collected during 3 sampling periods in 2012 and 1 sampling period …

Evaluating The Myth Of Allelopathy In California Blue Gum Plantations, Kristen Marie Nelson

Master's Theses

It is widely accepted that allelopathy is not only significant, but more or less singular, in the inhibition of understory vegetation in California Eucalyptus globulus (blue gum) plantations. However, there is no published documentation of allelopathy by blue gums against California native species. Here, we present evidence that germination and early seedling growth of five California native species are not inhibited by chemical extracts of blue gum foliage, either at naturally-occurring or artificially concentrated levels. In the greenhouse, seeds were germinated in field-collected soil from mature blue gum plantations and the adjacent native, coastal scrub communities. In petri plates, seeds …

Nitrogen Addition Shapes Soil Phosphorus Availability In Two Reforested Tropical Forests In Southern China, Xiankai Lu, Jiangming Mo, Frank S. Gilliam, Hua Fang, Feifei Zhu, Yunting Fang, Wei Zhang, Juan Huang

Frank S. Gilliam

Scant information is available on how soil phosphorus (P) availability responds to atmospheric nitrogen (N) deposition, especially in the tropical zones. This study examined the effect of N addition on soil P availability, and compared this effect between forest sites of contrasting land-use history. Effects of N addition on soil properties, litterfall production, P release from decomposing litter, and soil P availability were studied in a disturbed (reforested pine forest with previous understory vegetation and litter harvesting) and a rehabilitated (reforested mixed pine/broadleaf forest with no understory vegetation and litter harvesting) tropical forest in southern China. Experimental N-treatments (above ambient) …

Interspecific Divergence In Foliar Nutrient Dynamics And Stem Growth In A Temperate Forest In Response To Chronic Nitrogen Inputs, Jeffrey D. May, Sarah Beth Burdette, Frank S. Gilliam, Mary Beth Adams

Jeffrey May

We studied the effects of excessive nitrogen (N) fertilization on foliar nutrient dynamics and stem growth in three important tree species in a mixed-deciduous forest. Stem diameter growth, foliar N concentrations, nitrogen–phosphorus (N/P) ratios, and nutrient resorption were determined for Acer rubrum L. (ACRU), Liriodendron tulipifera L. (LITU), and Prunus serotina Ehrh. (PRSE) on two 30-year-old watersheds at the Fernow Experimental Forest, West Virginia, USA: WS3, fertilized annually with 35 kg ammonium sulfate·ha^-1 since 1989, and WS7, an untreated control watershed. In an earlier (1992) study, foliar N concentrations of all three species averaged 11% higher in WS3 than …

Interspecific Divergence In Foliar Nutrient Dynamics And Stem Growth In A Temperate Forest In Response To Chronic Nitrogen Inputs, Jeffrey D. May, Sarah Beth Burdette, Frank S. Gilliam, Mary Beth Adams

Frank S. Gilliam

We studied the effects of excessive nitrogen (N) fertilization on foliar nutrient dynamics and stem growth in three important tree species in a mixed-deciduous forest. Stem diameter growth, foliar N concentrations, nitrogen–phosphorus (N/P) ratios, and nutrient resorption were determined for Acer rubrum L. (ACRU), Liriodendron tulipifera L. (LITU), and Prunus serotina Ehrh. (PRSE) on two 30-year-old watersheds at the Fernow Experimental Forest, West Virginia, USA: WS3, fertilized annually with 35 kg ammonium sulfate·ha^-1 since 1989, and WS7, an untreated control watershed. In an earlier (1992) study, foliar N concentrations of all three species averaged 11% higher in WS3 than …

Long-Term Nitrogen Addition Decreases Carbon Leaching In A Nitrogen-Rich Forest Ecosystem, X. Lu, Frank S. Gilliam, G. Yu, H. Chen, J. Mo

Frank S. Gilliam

Dissolved organic carbon (DOC) plays a critical role in the carbon (C) cycle of forest soils, and has been recently connected with global increases in nitrogen (N) deposition. Most studies on effects of elevated N deposition on DOC have been carried out in N-limited temperate regions, with far fewer data available from N-rich ecosystems, especially in the context of chronically elevated N deposition. Furthermore, mechanisms for excess N-induced changes of DOC dynamics have been suggested to be different between the two kinds of ecosystems, because of the different ecosystem N status. The purpose of this study was to experimentally examine …

Interactive Effects Of Nitrogen And Phosphorus On Soil Microbial Communities In A Tropical Forest, Lei Liu, Tao Zhang, Frank S. Gilliam, Per Gundersen, Wei Zhang, Hao Chen, Jiangming Mo

Frank S. Gilliam

Elevated nitrogen (N) deposition in humid tropical regions may exacerbate phosphorus (P) deficiency in forests on highly weathered soils. However, it is not clear how P availability affects soil microbes and soil carbon (C), or how P processes interact with N deposition in tropical forests. We examined the effects of N and P additions on soil microbes and soil C pools in a N-saturated old-growth tropical forest in southern China to test the hypotheses that (1) N and P addition will have opposing effects on soil microbial biomass and activity, (2) N and P addition will alter the composition of …

Estimated Losses Of Plant Biodiversity Across The U.S. From Historical N Deposition From 1985—2010., Christopher M. Clark, Philip E. Morefield, Frank S. Gilliam, Linda H. Pardo

Frank S. Gilliam

Although nitrogen (N) deposition is a significant threat to herbaceous plant biodiversity worldwide, it is not a new stressor for many developed regions. Only recently has it become possible to estimate historical impacts nationally for the United States. We used 26 years (1985–2010) of deposition data, with ecosystem-specific functional responses from local field experiments and a national critical loads (CL) database, to generate scenario-based estimates of herbaceous species loss. Here we show that, in scenarios using the low end of the CL range, N deposition exceeded critical loads over 0.38, 6.5, 13.1, 88.6, and 222.1 million ha for the Mediterranean …

In Situ Nitrogen Mineralization, Nitrification, And Ammonia Volatilization In Maize Field Fertilized With Urea In Huanghuaihai Region Of Northern China, Xuelin Zhang, Qun Wang, Jun Xu, Frank S. Gilliam, Nicolas Tremblay, Chaohai Li

Frank S. Gilliam

Nitrogen (N) fertilization potentially affects soil N mineralization and leaching, and can enhance NH3 volatilization, thus impacting crop production. A fertilizer experiment with five levels of N addition (0, 79, 147, 215 and 375 kg N ha-1) was performed in 2009 and 2010 in a maize field in Huanghuaihai region, China, where > 300 kg N ha-1 has been routinely applied to soil during maize growth period of 120 days. Responses of net N mineralization, inorganic N flux (0–10cm), NH3 volatilization, and maize yield to N fertilization were measured. During the growth period, net N mineralization and nitrification varied seasonally, with …

Spatial Variation In Carbon And Nitrogen In Cultivated Soils In Henan Province, China: Potential Effect On Crop Yield, Xuelin Zhang, Qun Wang, Frank S. Gilliam, Yilun Wang, Feina Cha, Chaohai Li

Frank S. Gilliam

Improved management of soil carbon (C) and nitrogen (N) storage in agro-ecosystems represents an important strategy for ensuring food security and sustainable agricultural development in China. Accurate estimates of the distribution of soil C and N stores and their relationship to crop yield are crucial to developing appropriate cropland management policies. The current study examined the spatial variation of soil organic C (SOC), total soil N (TSN), and associated variables in the surface layer (0–40 cm) of soils from intensive agricultural systems in 19 counties within Henan Province, China, and compared these patterns with crop yield. Mean soil C and …

Nutrient Limitation In Three Lowland Tropical Forests In Southern China Receiving High Nitrogen Deposition: Insights From Fine Root Responses To Nutrient Additions, Feifei Zhu, Muneoki Yoh, Frank S. Gilliam, Xiankai Lu, Jiangming Mo

Frank S. Gilliam

Elevated nitrogen (N) deposition to tropical forests may accelerate ecosystem phosphorus (P) limitation. This study examined responses of fine root biomass, nutrient concentrations, and acid phosphatase activity (APA) of bulk soil to five years of N and P additions in one old-growth and two younger lowland tropical forests in southern China. The old-growth forest had higher N capital than the two younger forests from long-term N accumulation. From February 2007 to July 2012, four experimental treatments were established at the following levels: Control, N-addition (150 kg N ha–1 yr–1), P-addition (150 kg P ha–1 yr–1) and N+P-addition (150 kg N …

Spatial Variation In Carbon And Nitrogen In Cultivated Soils In Henan Province, China: Potential Effect On Crop Yield, Xuelin Zhang, Qun Wang, Frank S. Gilliam, Yilun Wang, Feina Cha, Chaohai Li

Frank S. Gilliam

Improved management of soil carbon (C) and nitrogen (N) storage in agro-ecosystems represents an important strategy for ensuring food security and sustainable agricultural development in China. Accurate estimates of the distribution of soil C and N stores and their relationship to crop yield are crucial to developing appropriate cropland management policies. The current study examined the spatial variation of soil organic C (SOC), total soil N (TSN), and associated variables in the surface layer (0–40 cm) of soils from intensive agricultural systems in 19 counties within Henan Province, China, and compared these patterns with crop yield. Mean soil C and …

Nutrient Limitation In Three Lowland Tropical Forests In Southern China Receiving High Nitrogen Deposition: Insights From Fine Root Responses To Nutrient Additions, Feifei Zhu, Muneoki Yoh, Frank S. Gilliam, Xiankai Lu, Jiangming Mo

Frank S. Gilliam

Elevated nitrogen (N) deposition to tropical forests may accelerate ecosystem phosphorus (P) limitation. This study examined responses of fine root biomass, nutrient concentrations, and acid phosphatase activity (APA) of bulk soil to five years of N and P additions in one old-growth and two younger lowland tropical forests in southern China. The old-growth forest had higher N capital than the two younger forests from long-term N accumulation. From February 2007 to July 2012, four experimental treatments were established at the following levels: Control, N-addition (150 kg N ha–1 yr–1), P-addition (150 kg P ha–1 yr–1) and N+P-addition (150 kg N …

In Situ Nitrogen Mineralization, Nitrification, And Ammonia Volatilization In Maize Field Fertilized With Urea In Huanghuaihai Region Of Northern China, Xuelin Zhang, Qun Wang, Jun Xu, Frank S. Gilliam, Nicolas Tremblay, Chaohai Li

Frank S. Gilliam

Nitrogen (N) fertilization potentially affects soil N mineralization and leaching, and can enhance NH3 volatilization, thus impacting crop production. A fertilizer experiment with five levels of N addition (0, 79, 147, 215 and 375 kg N ha-1) was performed in 2009 and 2010 in a maize field in Huanghuaihai region, China, where > 300 kg N ha-1 has been routinely applied to soil during maize growth period of 120 days. Responses of net N mineralization, inorganic N flux (0–10cm), NH3 volatilization, and maize yield to N fertilization were measured. During the growth period, net N mineralization and nitrification varied seasonally, with …

Microclimate Variation And Epiphyte Distribution In Acer Macrophylum, Jeremy Wood

Summer Research

Habitat heterogeneity plays a key role in supporting biodiversity in both animals and plant life. More diverse environments provide more exploitable niches across gradients in temperature, humidity, light availability, and countless other variables at the landscape and regional scales. In specimens of Acer macrophylum in the Hoh Rainforest, we found significant variation in temperature and relative humidity across particular crown zones, and certain epiphyte species were found to distribute according to such microclimate variation.

Spatial Distribution Of Earthworms In An East Texas Forest Ecosystem, Melissa A. Bozarth, Kenneth W. Farrish, George A. Damoff, James Van Kley, J. Leon Young

Faculty Publications

Earthworms were collected and identified in different ecological habitats of the Stephen F. Austin Experimental Forest (SFAEF) in the Piney Woods Ecoregion (PWE) of Texas. Earthworm spatial distribution data were collected over four distinct ecological habitats with a range of soil conditions and vegetative cover. A total of 128 sampling plots were surveyed in two different, broadly defined locations (mesic slope = 68 plots, dry-mesic upland = 60 plots). Using multivariate classification/ordination (TWINSPAN) and detrended correspondence analysis (DCA) of overstory vegetation data, these two locations were further divided into four distinct habitats: dry-mesic mixed upland, transitional zone, mesic slope and …

Habitat Use And Avoidance By Foraging Red-Cockaded Woodpeckers In East Texas, John N. Macey, Brent Burt, Daniel Saenz, Richard N. Conner

Faculty Publications

Picoides borealis (Red-cockaded Woodpecker) is an endangered bird endemic to the Pinus (pine) ecosystems of the southeastern US. Mature pine savannahs with a minimal midstory and lush herbaceous groundcover represent high-quality habitat. This study examines the foraging-habitat patterns of Red-cockaded Woodpeckers in East Texas. We present a logistic regression model that best differentiates between foraged and non-foraged habitat. Increases in hardwood-midstory basal area have the greatest negative impact on the probability of Red-cockaded Woodpeckers selecting a habitat patch for foraging. Five additional variables negatively impact foraging probability: shrub height, diameter at breast height (DBH) of pine midstory, canopy closure, density …

Nonalcoholic Fatty Liver Disease: Cause To Treatment, Tavleen Aulakh

Occam's Razor

Imagine two individuals, both suffering from severe liver damage. With excess fat molecules concentrated in the hepatic cells, their livers are inflamed and scarred. These deteriorating livers are also supplementing the development of chronic obesity, diabetes, cardiovascular diseases, and hyperlipidemia. While one of these individuals is a middle-aged male with a long history of alcohol addiction and abuse, the other is only thirteen years old and has never consumed alcohol. This adolescent is suffering from nonalcoholic fatty liver disease (NAFLD).

Occam's Razor Vol. 6 - Full (2016)

Occam's Razor

No abstract provided.

Twenty-Five Year Response Of The Herbaceous Layer Of A Temperate Hardwood Forest To Elevated Nitrogen Deposition, Frank S. Gilliam, Nicole Turrill Welch, Anne Hockenberry Phillips, Jake H. Billmyer, William T. Peterjohn, Zachariah K. Fowler, Christopher A. Walter, Mark B. Burnham, Jeffrey D. May, Mary Beth Adams

Biological Sciences Faculty Research

Increasing rates of atmospheric deposition of nitrogen (N) present a novel threat to the biodiversity of terrestrial ecosystems. Many forests are particularly susceptible to excess N given their proximity to sources of anthropogenic N emissions. This study summarizes results of a 25-yr treatment of an entire central Appalachian hardwood forest watershed via aerial applications of N with a focus on effects of added N on the cover, species richness, and composition of the herbaceous layer. Research was carried out on two watersheds of the Fernow Experimental Forest (FEF), West Virginia. The long-term reference watershed at FEF (WS4) was used as …

Early Seral Mixed-Conifer Forest Structure And Composition Following A Wildfire Reburn In The Sierra Nevada, Erin Alvey

Cal Poly Humboldt theses and projects

Before the era of modern fire suppression, California’s northern Sierra Nevada mixed-conifer and yellow pine forests were self-regulating; recurring short-interval, low-mixed severity wildfires maintained forest structure and composition, which in turn exerted bottom-up controls on subsequent wildfires. As a result of fire suppression, and coupled with the effects of climate warming and other anthropogenic disturbances, the fundamental structure of mixed-conifer and yellow pine forests has shifted. Wildfires may now be increasing in size, severity, and frequency across western North America. However, little is known about the post-fire impacts of repeat wildfire on a forest after a long era of suppression. …