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Animal Sciences Commons

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Genetics and Genomics

Independent Study Project (ISP) Collection

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Full-Text Articles in Animal Sciences

Tree To Tree: Phylogenetics Of Diverse Anura Using Portable Lab Equipment: Primer Optimization, Bioinformatic Pipeline, And Phylogenetic Analyses Reveal Potential New Species And Ability To Identify Evolutionary Relationships In A Hyper Diverse Anura Clade Using Nanopore Sequencing, Elinor Sterner Oct 2022

Tree To Tree: Phylogenetics Of Diverse Anura Using Portable Lab Equipment: Primer Optimization, Bioinformatic Pipeline, And Phylogenetic Analyses Reveal Potential New Species And Ability To Identify Evolutionary Relationships In A Hyper Diverse Anura Clade Using Nanopore Sequencing, Elinor Sterner

Independent Study Project (ISP) Collection

The Corredor Llanganates-Sangay is an extremely significant region for conservation, coined a “gift to the earth” by the World Wildlife Fund. Understanding amphibians species and populations is key due to their roles as hyper sensitive bioindicators. In recent years, portable sequencing equipment (Mini PCR thermocyclers, Oxford Nanopore Technology’s MinION sequencer, etc) make genetic data collection in remote areas possible, greatly increasing potential for conservation genetics and genomics. This study uses portable equipment to sequence two mitochondrial loci in 104 Anuran samples collected in four sites in the Corridor and presents phylogenies of each gene as well as a concatenated phylogeny. …


The Stallion's Mane: The Next Generation Of Horses In Mongolia, Amanda Hund Oct 2008

The Stallion's Mane: The Next Generation Of Horses In Mongolia, Amanda Hund

Independent Study Project (ISP) Collection

Horses play a central role in Mongolian history and culture, yet there has been little academic research on breeding methods, either traditional or modern in Mongolia. The goal of good horse breeding is to maintain and improve the quality of the breed. By looking at the traditional breeding, we gain a better understanding of what Mongolian culture values in their horses and what they are hoping to pass on to the next generation. We can also learn how this information is passed on in an oral tradition from generation to generation of horse trainers and herders. In traditional Mongolian horse …