Life Sciences Commons^™

Dicliny In Bouteloua (Poaceae: Chloridoideae): Implications For The Evolution Of Dioecy, Michael S. Kinney, J. Travis Columbus, Elizabeth A. Friar

Aliso: A Journal of Systematic and Floristic Botany

The New World grass genus Bouteloua (Chloridoideae: Cynodonteae) comprises 57 species, 13 of which produce unisexual spikelets and hence are diclinous. Andromonoecy, gynodioecy, monoecy, trimonoecy, and dioecy all occur in the genus, and ten species are known to express more than one of these breeding systems. Employing a phylogenetic estimate based on parsimony analysis of DNA sequences from the ITS (nrDNA) and trnL–F (cpDNA) regions representing 35 species of Bouteloua, including ten of 13 diclinous species, we used parsimony character state reconstructions to investigate the evolution of unisexual spikelets and breeding systems. Our specific goals were to estimate …

The Emergence Of Sex, Ursula Goodenough

Biology Faculty Publications & Presentations

Biological traits, the foci of natural selection, are by definition emergent from the genes, proteins, and other “nothing-buts” that constitute them. Moreover, and with the exception of recently emergent “spandrels,” each can be accorded a teleological dimension—each is “for” some purpose conducive to an organism's continuation. Sex, which is “for” the generation of recombinant genomes, may be one of the most ancient and ubiquitous traits in biology. In the course of its evolution, many additional traits, such as gender and nurture, have emerged. Patterns of sexual exchange are the basis for patterns of biological evolution and are central to the …

Development And Characterization Of Microsatellite Markers For The Grain Amaranths (Amaranthus Spp. L.), Melanie Ann Mallory

Theses and Dissertations

The grain amaranths (Amaranthus hypochondriacus L., A. cruentus L., and A. caudatus L.) are important pseudocereals native to the Americas that have received increased attention for their nutritional content, specifically their balance of amino acids. The objective of this project was to produce and characterize a set of highly informative, reproducible microsatellite markers for the grain amaranths. A total of 1457 clones were sequenced from three genomic libraries enriched for the microsatellite motifs AAC, AAT and AC. Of these, 353 (24%) contained unique microsatellites. An additional 29 microsatellite loci were identified among 728 BAC-end sequences of a newly developed amaranth …

Editor's Note, Padraig O'Malley

New England Journal of Public Policy

This issue of the New England Journal of Public Policy that deals with issues of climate change, oil, and water and the interconnection of the three with the future of the planet.

Initially our topic was conceived as “Oil & Water” only. We planned to present the proceedings of an Institute for Global Leadership symposium held at Tufts University in 2005. There was then still a debate about global warming, although the Kyoto Treaty was in place. But without the world’s preeminent manufacturer of greenhouse gas (GHG) emissions, the United States (20 percent of the total emissions with 5 percent …

Historical Evolution And Future Of Natural Resources Law And Policy: The Beginning Of An Argument And Some Modest Predictions, Sally K. Fairfax, Helen Ingram, Leigh Raymond

The Future of Natural Resources Law and Policy (Summer Conference, June 6-8)

8 pages.

Includes bibliographical references

"Sally Fairfax, UC-Berkeley, Helen Ingram, UC-Irvine, and Leigh Raymond, Purdue University" -- Agenda

Evolution In The Classroom: Should We Change Our Approach In Light Of The Intelligent Design Controversy?, Bruce Byers

Science and Engineering Saturday Seminars

No abstract provided.

Modeling And Partitioning The Nucleotide Evolutionary Process For Phylogenetic And Comparative Genomic Inference, Todd Castoe

Electronic Theses and Dissertations

The transformation of genomic data into functionally relevant information about the composition of biological systems hinges critically on the field of computational genome biology, at the core of which lies comparative genomics. The aim of comparative genomics is to extract meaningful functional information from the differences and similarities observed across genomes of different organisms. We develop and test a novel framework for applying complex models of nucleotide evolution to solve phylogenetic and comparative genomic problems, and demonstrate that these techniques are crucial for accurate comparative evolutionary inferences. Additionally, we conduct an exploratory study using vertebrate mitochondrial genomes as a model …

Does Increasing Biology Teacher Knowledge Of Evolution And The Nature Of Science Lead To Greater Advocacy For The Teaching Of Evolution In Schools?, Ross Nehm, Irvin Sam Schonfeld

Publications and Research

This study investigated whether or not an increase in secondary science teacher knowledge about evolution and the nature of science gained from completing a graduate-level evolution course was associated with greater preference for the teaching of evolution in schools. Forty-four precertified secondary biology teachers participated in a 14-week intervention designed to address documented misconceptions identified by a precourse instrument. The course produced statistically significant gains in teacher knowledge of evolution and the nature of science and a significant decrease in misconceptions about evolution and natural selection. Nevertheless, teachers' postcourse preference positions remained unchanged; the majority of science teachers still preferred …

Strokes Of Existence: The Connection Of All Things, Mari Gorman

Graduate Student Publications and Research

Acted or real—and all life is real whether one is acting or not—the common denominator and consistent, ubiquitous reality of life and all behavior is that it manifests in the form of relationships on all scales. But what is a relationship? Until now, the answer to this question has not been sufficiently known. As a result of many years of empirical research that began with the aim of discovering what is going on in a gifted actor when s/he is playing a character that can be observed and experienced as a living, intuitive being, and based on the knowledge that …

A Performance Based Approach To Distinguish Indices From Handicaps In Sexual Selection Studies, B Vanhooydonck, R Van Damme, A Herrel, Dj Irschick

Biology Department Faculty Publication Series

1. Central to theories of the evolution of conspicuous secondary sexual traits is that sexual traits honestly reflect at least one aspect of an individual's quality. In general, the reliability of sexual traits can be explained in two ways. Either sexual traits are reliable indicators of individual quality because they are costly and the costs in terms of survival are higher for an individual of low quality as compared to an individual of high quality (i.e. handicap principle) or sexual traits are reliable because of physical constraints and thus cost-free (reliability by design).
2. The distinction between indices and handicaps thus centres …

Evolution Of The Field Of Wildlife Damage Management In The United States And Future Challenges, James E. Miller

Human–Wildlife Interactions

Through the early twentieth century, people in rural areas of North America either dealt with problems caused by wildlife by killing the problem species, eliminating its habitat, changing crops or husbandry practices, tolerating the damage, or moving to a new area devoid of such problem animals. However, many of these solutions are impractical today with the increase in human populations, the increased expansion of development into previously rural landscapes, the increased fragmentation of land ownership, and the increasing movement of people into metropolitan areas. Because of current local, state, and federal ordinances and regulations, along with the impacts of animal …

Evolution, Jonathan Eisen

Jonathan A. Eisen Ph.D.

No abstract provided.

Runx2 Is Essential For Larval Hyobranchial Cartilage Formation In Xenopus Laevis, Ryan Kerney, Joshua Gross, James Hanken

Ryan Kerney

The vertebrate transcription factor protein Runx2 is regarded as a “master regulator” of bone formation due to the dramatic loss of the osseous skeleton in the mouse homozygous knockout. However, Runx2 mRNA also is expressed in the pre-hypertrophic cartilaginous skeleton of the mouse and chicken, where its developmental function is largely unknown. Several tiers of Runx2 regulation exist in the mouse, any of which may account for its seeming biological inactivity during early stages of skeletogenesis. Unlike mouse and chicken, zebrafish require Runx2 function in early cartilage differentiation. The present study reveals that the earlier functional role of Runx2 in …