Life Sciences Commons^™

Population Ecology Of The Diamondback Terrapin At Their Northern Range Limit, Patricia M. Levasseur

Doctoral Dissertations

This dissertation research focuses on the population ecology of the northern diamondback terrapin (Malaclemys terrapin terrapin) in Wellfleet Bay, MA. The northern diamondback terrapin is a Massachusetts-threatened turtle species restricted to estuarine environments. With a range from Cape Hatteras, North Carolina to Massachusetts, Cape Cod Bay is the northernmost part of the subspecies range. Mass Audubon’s Wellfleet Bay Wildlife Sanctuary has been using capture-mark-recapture (CMR) methods since 1980 marking over 3,000 individuals; however, low detection rates and variable search effort have resulted in unreliable population estimates not suitable for informing conservation practices within the bay. Low sample sizes, …

Testing For Relationships Between Animal Personality Traits, Activity Level And Voracity, And The Underlying Influence Of Body Size In The Dragonfly Predator, Epitheca Canis, Flynn Gorman

Senior Theses and Projects

Animal personality, defined as among-individual variation in behavior, is taxonomically widespread, but its ecological implications remain unclear. While associations between animal personality and ecological traits have been examined, methodological shortcomings, such as lack of repeated measurements, limit the insights these studies provide. Here, I measured the repeatability of activity level and feeding rate behaviors in the nymph stage of the dragonfly predator, Epitheca canis, taking 10 repeated measurements of each trait over a 10-week period. Moreover, I tested for a relationship between among-individual variation in activity level and feeding rate while accounting for the underlying influence of nymph body …

Hide And Seek: An Exploration Of Antipredator And Predator Avoidance Mechanisms In Orthopodomyia Signifera In Response To Predation From Toxorhynchites Rutilus, Nathaniel Dahlberg

Master's Theses

There have been many observations of larval Orthopodomyia signifera coexisting with the predator Toxorhynchites rutilus. There are three hypotheses that could explain how Or. signifera resists predation from Tx. rutilus. The first hypothesis states that larvae adapt behavioral changes that limit predation. The second hypothesis states thoracic setae serve as a physical defense that prevents Tx. rutilus from grasping Or. signifera. The third hypothesis states Or. signifera possess a chemical defense indicated by aposematic coloration. To test the first hypothesis larval Or. signifera were exposed to conspecific and heterospecific predation cues and their behavior was observed. Both cues …

Keystone Species Explorer Website, Claire Hutchings

WWU Honors College Senior Projects

This project is an educational resource (in the form of a website) for elementary and middle school students to explore the ecological concept of keystone species. This site has been designed to provide young students with an accessible, engaging introduction to ecology. The website was created with the design platform Wix. This site is going to be a project in continued development, with entries covering content on several keystone species. The first species covered on the site is the North American beaver. Traditionally-rendered illustrations accompany various pages of content. These pages review the biology and behavior of this animal, its …

Cell Volume As A Determinant Of Virus-Mediated Population Growth In Ciliates, Jace Miller, John Paul Delong Phd

Honors Theses

Many protists and other small aquatic organisms consume virus particles, a behavior known as virovory. Some species of protists, such as the ciliate Halteria grandinella, can grow and divide using viruses as their sole food source. Other ciliate species have previously been shown to consume large quantities of viral particles, but it is unclear if they are able to support population growth with viruses alone. Because large ciliates have a higher energy demand, we hypothesize that they will be unable to support population growth on a virus-only diet. We fed nine ciliate species a diet of chloroviruses and found …

Growth And Survival Of Amphibians Exposed To Road Salt And Glyphosate-Based Herbicide, Jerica Eaton

Mahurin Honors College Capstone Experience/Thesis Projects

Amphibian populations are threatened by increasing levels of environmental pollution resulting from human activities. Areas with mixed land use that include agriculture and urban development experience increased contamination from surface herbicide and road deicer application. Upon entering water sources, these chemicals have the capacity to disrupt the natural dynamics of aquatic ecosystems. This study aimed to evaluate the effects of these contaminants on amphibian populations. I used the spotted salamander (Ambystoma maculatum) as a model, rearing larvae from hatching to metamorphosis. I subjected larvae in each of the treatment groups to varying levels of herbicide and salt concentrations. …

Characterization Of The Mycobiome Of Rafflesia Seeds: Their Potential Ecological Roles And Applications In Rafflesia Propagation And Conservation, Feruza Karnitskiy

Selected Full-Text Master Theses 2021-

The plant microbiome exerts a profound influence on plant health, growth, and life cycle. This ecosystem comprises diverse microbial communities, such as symbiotic endophytes, mycorrhizal fungi, epiphytes, saprophytes, rhizobia, and pathogens, which inhabit parasitic and non-parasitic plants. Rafflesia speciosa, a holoparasitic plant, is a unique and endangered species that depends on its host Tetrastigma spp. for survival. In this study, fungal metagenomics was conducted to characterize the fungal community—the mycobiome within Rafflesia seeds, and a phylogeny was reconstructed. The ecophysiological characteristics of these fungal genera were also researched in the literature, and their primary ecological trait, whether plant mutualist, saprotroph, …

Assessing Forest Features And Nocturnal Flying Insect Diversity As Predictors Of Eastern Whip-Poor-Will Occupancy In Foraging Habitat, Clark D. Alexander

Graduate Theses, Dissertations, and Problem Reports

Eastern whip-poor-will (Antrostomus vociferus), an insectivorous caprimulgid, have seen an approximate 2.76% annual population decrease since the 1960s, with their breeding and foraging ecology largely unknown due to their nocturnal and cryptic behavior. I conducted research to assess abiotic and biotic variables correlated with detection, and occupancy probability, and prey species diversity on ~104,000 hectares of forest in West Virginia, owned by the private timber company Weyerhaeuser. Previous literature indicates that Eastern whip-poor-will, and their prey, require ephemeral habitat such as recently cleared and early successional forests, like those historically created by forest fires, wind shears, hurricanes, and …

Rapidly Changing Range Limits In A Warming World: Critical Data Limitations And Knowledge Gaps For Advancing Understanding Of Mangrove Range Dynamics In The Southeastern Usa, Rémi Bardou, Michael J. Osland, Steven Scyphers, Christine Shepard, Karen E. Aerni, Jahson B. Alemu I, Robert Crimian, Richard H. Day, Nicholas M. Enwright, Laura C. Feher, Sarah L. Gibbs, Kiera O'Donnell, Savannah H. Swinea, Kalaina Thorne, Sarit Truskey, Anna R. Armitage, Ronald Baker, Josh L. Breithaupt, Kyle C. Cavanaugh, Erik S. Yando, A. Randall Hughes, Et Al.

Biological Sciences Faculty Publications

Climate change is altering species’ range limits and transforming ecosystems. For example, warming temperatures are leading to the range expansion of tropical, cold-sensitive species at the expense of their cold-tolerant counterparts. In some temperate and subtropical coastal wetlands, warming winters are enabling mangrove forest encroachment into salt marsh, which is a major regime shift that has significant ecological and societal ramifications. Here, we synthesized existing data and expert knowledge to assess the distribution of mangroves near rapidly changing range limits in the southeastern USA. We used expert elicitation to identify data limitations and highlight knowledge gaps for advancing understanding of …

Utilizing Markov Chains To Estimate Allele Progression Through Generations, Ronit Gandhi

Honors Theses

All populations display patterns in allele frequencies over time. Some alleles cease to exist, while some grow to become the norm. These frequencies can shift or stay constant based on the conditions the population lives in. If in Hardy-Weinberg equilibrium, the allele frequencies stay constant. Most populations, however, have bias from environmental factors, sexual preferences, other organisms, etc. We propose a stochastic Markov chain model to study allele progression across generations. In such a model, the allele frequencies in the next generation depend only on the frequencies in the current one.

We use this model to track a recessive allele …

Levels Of Autotrophy And Heterotrophy In Mesophotic Corals Near The End Photic Zone, Amy Carmignani, Veronica Z. Radice, Kathryn M. Mcmahon, Alex I. Holman, Karen Miller, Kliti Grice, Zoe Richards

Biological Sciences Faculty Publications

Mesophotic corals live at ~30-150 m depth and can sustain metabolic processes under light-limited conditions by enhancing autotrophy through specialized photoadaptations or increasing heterotrophic nutrient acquisition. These acclimatory processes are often species-specific, however mesophotic ecosystems are largely unexplored and acclimation limits for most species are unknown. This study examined mesophotic coral ecosystems using a remotely operated vehicle (Ashmore Reef, Western Australia at 40–75m depth) to investigate the trophic ecology of five species of scleractinian coral (from genera Leptoseris, Pachyseris, and Craterastrea) using stable isotope analyses (δ¹³C and δ¹⁵N) of host and symbiont tissues …

The Role Of Machine Learning And Network Analyses In Understanding Microbial Composition In An Experimental Prairie, Ali Eastman Oku

Graduate Research Theses & Dissertations

Machine learning and network analyses are powerful modern tools can process and map out connections between large amount of ecological data from complex environmental communities. Random forests, an ensemble machine learning algorithm, are particularly powerful as they can capture complex patterns in data while remaining easily interpretable. These tools are specifically useful in experimental settings where different types of data are collected. The aim of this study was to demonstrate the utility of machine learning models and network analyses at analyzing diverse ecological data from dynamic plant-soil microbial communities in a prairie ecosystem. Our experimental system is an experimental prairie …

A Gis Look At Woody Plant Encroachment (Wpe): Mapping Grassland Degradation Through Habitat Succession, Brandon M. Wolf

Geography and the Environment: Graduate Student Capstones

The grasslands of North America remain at a fraction of their historic range. Estimates of acreage remaining vary between 4% and 13%. Affectionately known as the Great Plains, these grasslands have been converted for agriculture, rangeland, infrastructure, and civilization itself. Woody Plant Encroachment (WPE) on the grasslands is a silent, often overlooked, serious threat. The use of a simple GIS can estimate current acreage of a grassland, its adjacent woodland corridor, riparian buffers, and predict future acreage based on trends and hypothetical management scenarios, or lack thereof. The American prairie, though a remnant of its former self, is still home …

Habitat Associations And Fine-Scale Movements Of The Red-Spotted Toad (Anaxyrus Punctatus) In Kansas And The Efficacy Of Remote Telemetry For Monitoring Small-Scale Movements, Elisabeth Russell

Master's Theses

As climate change progresses, arid-adapted anurans might be particularly susceptible to population declines because of their reliance on ephemeral pools for successful reproduction. Because arid-adapted anurans are difficult to study due to short active seasons and cryptic lifestyles, little is known about their habitat preferences. One such arid-adapted species is the Red-Spotted Toad (Anaxyrus punctatus; RST), a Kansas Species in Need of Conservation. Since this designation in 1987, little research has been conducted to understand their conservation needs. During the summers of 2021 and 2022, RST surveys were conducted both near areas where the species has historically been …

Hitting The Sweet Spot: Optimizing Camera Trapping Effort For Estimating Biodiversity In Coastal Environments, Ella Dipetto, Oleksii Dubovyk, Chi Wei, Angela Brierly, Eric Walters, Alex Teodorescu, Jillian Murphy

College of Sciences Posters

Wildlife trail cameras, or “camera traps”, have become an effective tool in ecological research and conservation management across a variety of ecosystems to monitor a wide range of taxa. Camera trapping allows for extended survey time in traditionally hard-to-survey environments and has greatly increased our ability to detect cryptic species. One question ecologists commonly face is how much sampling effort is required to accurately estimate community composition. Despite the abundant literature that uses camera trapping techniques, few studies have occurred in coastal saltmarsh ecosystems. These ecosystems are being lost at a rapid rate from land conversion, pollution, and other anthropogenic …

The Importance Of Winter Dinoflagellate Blooms In Chesapeake Bay— A Missing Link In Bay Productivity, Nicole C. Millette, Sophie Clayton, Margaret R. Mulholland, Leah Gibala-Smith, Michael Lane

OES Faculty Publications

It is widely assumed that phytoplankton abundance and productivity decline during temperate winters because of low irradiance and temperatures. However, winter phytoplankton blooms commonly occur in temperate estuaries, but they are often undocumented because of reduced water quality monitoring in winter. The small body of in situ work that has been done on winter blooms suggests they can be of enormous consequence to ecosystems. However, because monitoring is often reduced or stopped altogether during winter, it is unclear how widespread these blooms are or how long they can last. We analyzed an over 30-year record of monthly phytoplankton monitoring samples …

The Effect Of Environmental Factors On Movement Patterns And Habitat Use Of Young-Of-The-Year Scalloped Hammerhead Sharks (Sphyrna Lewini) In The Tolomato River Nursery, Matthew Bernanke

UNF Graduate Theses and Dissertations

Various shark populations on the southeastern coast of the United States experienced declines in the late 20^th century, including the scalloped hammerhead shark (Sphyrna lewini). Improved management strategies, implemented in the late 1990s, have helped these populations to recover, but they are still under threat from fishing pressure and habitat loss. In continuing to strive towards population recovery and conservation, it is important to identify Essential Fish Habitat, or habitats that are necessary for the spawning, feeding, breeding, or growth of marine organisms. One such habitat is that of the shark nursery habitat. Nursery habitats are those …

Our Natural World, Jennifer Mattei

Biology Faculty Publications

It’s nothing earth-shattering to say our natural world gives us everything we need to survive, from the oxygen we breathe and the clean water we drink to that apple you are enjoying with your lunch today. We all know this. However, we sometimes fail to appreciate and act on the converse—if we fail to maintain a well-functioning and resilient natural world our future is literally at risk.

What’s more, our reliance on nature goes deeper than the base physical essentials of air, water and food that are required for life. Our bodies—physically, mentally and emotionally—are healthier for their interaction with …

Ecology And Evolution Of Social Information Use, Clare T. M. Doherty

Dartmouth College Ph.D Dissertations

Sociality is a strategy many animals employ to cope with their environments, enabling them to survive and reproduce more successfully than would otherwise be possible. When navigating their environments and making decisions, social individuals often use information provided by conspecifics (in the form of social cues and signals), thereby increasing the scope and reliability of the information they can gather. However, social information use may be influenced by many factors, including key differences in context across the physical and social environment. My thesis asks and answers a series of questions regarding the trade-offs in social information use across different contexts, …

A Study Of Red Snapper (Lutjanus Campechanus) Ecology In The Northern Gulf Of Mexico And The Effect Of Variable River Outflow Using Stable Isotope Analysis Of The Food Web And Eye Lenses, Caitlin C. Slife

Dissertations

In the Mississippi Bight and surrounding waters, river outflow impacts the basal resources of the Red Snapper food web, altering carbon sources and impacting prey and predator isotopes. In this study, the impact of riverine outflow on nutrients, particulate organic matter (POM), and physical water parameters on Red Snapper and their food web was analyzed using stable isotope and stomach content analysis over 5 years. The Mississippi, Pearl, Pascagoula, and Mobile rivers were included in the analysis of river impact. The Mississippi and Mobile rivers were found to significantly impact nutrients and POM in the region. River outflow was also …

Characterizing Habitat Suitability For Gulf Sturgeon (Acipenser Oxyrinchus Desotoi) In Southern Louisiana, Jenna N. Brogdon

LSU Master's Theses

A generalized additive modeling (GAM) framework was used to characterize fish-habitat relationships and develop habitat suitability maps to predict spatiotemporal and ontogenetic shifts in Gulf sturgeon distribution within an impacted estuary in the northern Gulf of Mexico, Lake Pontchartrain. Gulf sturgeon (n = 103) were fitted with acoustic transmitters in the Pearl River during the early summer and fall from 2013 to 2018, and an array of acoustic receivers (n = 81) was used to monitor Gulf sturgeon habitat use and movement in the estuary from 2016 to 2019. Daily presence data from the telemetry array were paired with environmental …

Effects Of Mass Death On Community Structure And Ecosystem Function, Abby Kimpton Jones

Theses and Dissertations

Death and decomposition are natural processes that are generally well-understood. However, large events of death, such as mass mortality events (MMEs) are increasing in frequency and their impacts on the ecosystem are largely unknown. These events may have both bottom-up effects from increased nutrient input as well as top-down effects from loss of an ecological functional group by the affected population. Different functional MMEs may result in different top-down effects, creating cascading effects. In Chapter 1, I test the hypothesis that scavenger and herbivore simulated MMEs generate novel bottom-up and top-down effects. Results indicate that MMEs have a significant effect …

Regional-Scale Climate-Induced Variation In Ant Physiology And Morphology, Daniel E. Murphy

Biology Theses

The biology of ectotherms such as insects is influenced by ambient thermal conditions. Ants are a ubiquitous and ecologically important group of insects and are well-established as bioindicators of thermal conditions. Ants are sensitive to the thermal extremes that vary with latitude, elevation, and land use, and these thermal gradients influence their spatial and temporal distributions. As a result, ants have evolved physiological and morphological thermal adaptations in response to the thermal environment of their habitats. These adaptations include increased physiological and morphological tolerance for temperature extremes. In Western New York (WNY), temperatures are temporally and spatially heterogeneous, changing with …

Competing Behaviors Of Thermoregulation And Ambush Foraging In The Timber Rattlesnake (Crotalus Horridus Horridus): A Mechanistic Assessment Of Thermal Conduction, Larry K. Kamees

Graduate Theses and Dissertations

The interaction between the biophysical environment and ectotherm morphology elicits behaviors designed to maintain internal body temperature (Tb) within a range that promotes physiological functions. The short-term requirements of mass (energy requirements) and heat balance are subject to tradeoffs imposed by the organisms current physiological (heat and mass budgets) and environmental (biophysical, demographic, social, and predation) constraints and available resources. In temperate forests, extreme temperatures are common in summer even with intermittent sun exposure due to dense canopy cover. In Spring and Fall, temperatures can range from below freezing to 35 ℃ in 24 hrs. An ambush predator like the …

Synopsis Of The Tribe Amarotypini In New Zealand (Coleoptera: Carabidae), André Larochelle, Marie-Claude Larivière

Insecta Mundi

The tribe Amarotypini (Coleoptera: Carabidae: Migadopinae) is revised for New Zealand. Three genera and fourteen species are recognized.

Two genera and thirteen species are described as new: Amarophilus Larochelle and Larivière new genus, Amarophilus lomondensis Larochelle and Larivière new species, Amarophilus otagoensis Larochelle and Larivière new species, Amarophilus rotundicollis Larochelle and Larivière new species, Amarophilus wanakensis Larochelle and Larivière new species, Amarotypus fiordlandensis Larochelle and Larivière new species, Amarotypus glasgowensis Larochelle and Larivière new species, Amarotypus murchisonorum Larochelle and Larivière new species, Amarotypus simoninensis Larochelle and Larivière new species, Amarotypus takaheensis …

Disturbance Ecology Of The Sonadora River Rock Pool Insect Assemblage At Luquillo Experimental Forest, Puerto Rico, Patrick Gilkey

Master's Theses

Freshwater rock pools can serve as habitat for aquatic insects. Flash-flooding can have profound effects on insect communities in streams and rivers, but these effects have not been studied on freshwater rock pools. The goal of this thesis was to describe ecological patterns of the Sonadora River rock pool insect community at the Luquillo Experiment Forrest, Puerto Rico, specifically in response to intense flash-flooding, and then perform experiments to elucidate possible processes to explain those patterns. The rock pools contained primarily three taxa of Dipteran (true-fly) larvae, in order of decreasing abundance, 1) a newly discovered species of ceratopogonid (biting …

Distribution And Ecological Function Of Pacific Lamprey In The San Luis Obispo Creek Watershed, Parker Kalan

Master's Theses

Pacific lamprey (Entosphenus tridentatus) is an endemic species to coastal watersheds along the Pacific Rim in North America and Asia. The species' geographic distribution is retracting and has not been mapped precisely, and the ability for the species to provide ecosystem services, such as water filtration, for supporting watershed management has not been tested. The San Luis Obispo Creek watershed, California, USA is at the southern end of Pacific lamprey’s retracting distribution, and the San Luis Obispo watershed is impacted by degraded water quality, making investigation of Pacific lamprey in the San Luis Obispo Creek watershed of direct …

Rethinking Human-Local Wildlife Relations, Yin Chan

Critical and Creative Thinking Capstones Collection

The plight of suburban wildlife receives considerably less attention than that of exotic or endangered species despite facing similar threats due to the decline of their natural habitats as humans expand upon them. From the perspective of a reflective practitioner, this paper provides new avenues to rethink current views on human-local wildlife relations and answer some of the difficult questions surrounding the topic. The methodology of Action Research is employed to explore concepts relevant to human-local wildlife relations. A synthesized practical framework integrating Action Research with Permaculture Design is proposed to create models for mutually beneficial coexistence between local wildlife …

Distribution Patterns Of The Invasive Mussel Arcuatula Senhousia In Mission Bay, San Diego, California: Effects Of Sediment Grain Size And Byssus Thread Production On Predation, Samantha Ahlman

Theses

The ability of bivalves to avoid predation by using defensive behaviors such as burrowing and byssus production may vary depending on the sediment characteristics of a given habitat. The varying sediment characteristics that change with water velocity within estuaries may influence the distribution of bivalves and limit them to areas that optimize their ability to defend against predators. We examined the distribution patterns of the invasive Asian date mussel Arcuatula senhousia relative to the sediment grain size distribution in Mission Bay, an urban estuary located in San Diego, California, USA. Mussels and sediment were collected using an Ekman grab at …

Gene Drives And The Consequences Of Over-Suppression, Cole Butler

Biology and Medicine Through Mathematics Conference

No abstract provided.