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Articles 1 - 30 of 63
Full-Text Articles in Life Sciences
Rescape: Transforming Coral-Reefscape Images For Quantitative Analysis, Zachary Ferris, Eraldo Ribeiro, Tomofumi Nagata, Robert Van Woesik
Rescape: Transforming Coral-Reefscape Images For Quantitative Analysis, Zachary Ferris, Eraldo Ribeiro, Tomofumi Nagata, Robert Van Woesik
Ocean Engineering and Marine Sciences Faculty Publications
Ever since the first image of a coral reef was captured in 1885, people worldwide have been accumulating images of coral reefscapes that document the historic conditions of reefs. However, these innumerable reefscape images suffer from perspective distortion, which reduces the apparent size of distant taxa, rendering the images unusable for quantitative analysis of reef conditions. Here we solve this century-long distortion problem by developing a novel computer-vision algorithm, ReScape, which removes the perspective distortion from reefscape images by transforming them into top-down views, making them usable for quantitative analysis of reef conditions. In doing so, we demonstrate the …
Does Oxybenzone Affect The Development Of Sea Urchins Up To The Gastrula Stage, And What Do We Do About It?, Claire Crozier
Does Oxybenzone Affect The Development Of Sea Urchins Up To The Gastrula Stage, And What Do We Do About It?, Claire Crozier
Honors Projects
Understanding the effects of anthropogenic factors, such as oxybenzone, on sea urchins is extremely important to protect the growth of coral reefs- the ocean’s hotspot for biodiversity. Spawning of sea urchins, Lytechinus variegatus, was induced and eggs were fertilized in different concentrations of oxybenzone contaminated water. 48 hours later, data was collected underneath a light microscope. Observations of the data indicate that oxybenzone negatively affects sea urchin development up until the gastrula stage. Using both my data and knowledge from standing literature, I decided to write a policy analysis paper to answer the question “what should we do regarding sunscreen …
Disparate Population And Holobiont Structure Of Pocilloporid Corals Across The Red Sea Gradient Demonstrate Species-Specific Evolutionary Trajectories, Carol Buitrago-López, Anny Cárdenas, Benjamin C.C. Hume, Thierry Gosselin, Fabian Staubach, Manuel Aranda, Daniel J. Barshis, Yvonne Sawall, Christian R. Voolstra
Disparate Population And Holobiont Structure Of Pocilloporid Corals Across The Red Sea Gradient Demonstrate Species-Specific Evolutionary Trajectories, Carol Buitrago-López, Anny Cárdenas, Benjamin C.C. Hume, Thierry Gosselin, Fabian Staubach, Manuel Aranda, Daniel J. Barshis, Yvonne Sawall, Christian R. Voolstra
Biological Sciences Faculty Publications
Global habitat degradation heightens the need to better understand patterns of genetic connectivity and diversity of marine biota across geographical ranges to guide conservation efforts. Corals across the Red Sea are subject to pronounced environmental differences, but studies so far suggest that animal populations are largely connected, excepting evidence for a genetic break between the northern-central and southern regions. Here, we investigated population structure and holobiont assemblage of two common pocilloporid corals, Pocillopora verrucosa and Stylophora pistillata, across the Red Sea. We found little evidence for population differentiation in P. verrucosa, except for the southernmost site. Conversely, S. …
Houtman Abrolhos Islands Fish Habitat Protection Area: A Summary Of Marine Resource Use And Ecological Attributes, Scott N. Evans, Nick Konzewitsch, Lynda M. Bellchambers
Houtman Abrolhos Islands Fish Habitat Protection Area: A Summary Of Marine Resource Use And Ecological Attributes, Scott N. Evans, Nick Konzewitsch, Lynda M. Bellchambers
Fisheries research reports
The Houtman Abrolhos Islands (Abrolhos) is an archipelago of up to 210 small islands and associated reefs located approximately 65-90 km offshore from Geraldton, Western Australia (WA). The islands and waters of the Abrolhos are of significance for both land-based and marine based values. The marine state territorial waters of the Abrolhos are managed by the Department of Primary Industries and Regional Development (DPIRD) as the Houtman Abrolhos Islands Fish Habitat Protection Area (Abrolhos FHPA). This report aims to provide a summary of the DPIRD data on aquatic resource use (e.g., aquaculture, commercial, recreational and charter fishing) and ecological attributes …
Comparison Of Modern And Mid-Holocene Benthic Foraminifera To Assess Recent Environmental Change In Almirante Bay, Caribbean Panama, Maria N. Gudnitz
Comparison Of Modern And Mid-Holocene Benthic Foraminifera To Assess Recent Environmental Change In Almirante Bay, Caribbean Panama, Maria N. Gudnitz
FIU Electronic Theses and Dissertations
This study used the diversity and distribution of benthic foraminiferal assemblages of Almirante Bay, Caribbean Panama, as environmental proxies to compare modern coral, seagrass and mangrove habitats to mid-Holocene coral reef facies on the island of Isla Colón, to investigate both natural and human-influenced changes.
The modern study associated species and assemblage characteristics with environmental conditions related to degraded water quality. Assemblages were fairly similar among neighboring habitats but differed in species proportions, while several stress-tolerant taxa might indicate eutrophic conditions. Diversity appeared to be regionally controlled by freshwater input irrespective of habitat type, was generally lower near the mainland …
Review: Formation And Metabolic Function Of Coral Rubble Biofilms In The Reef Ecosystem, Andres Sanchez-Quinto, Luisa I. Falcon
Review: Formation And Metabolic Function Of Coral Rubble Biofilms In The Reef Ecosystem, Andres Sanchez-Quinto, Luisa I. Falcon
Gulf and Caribbean Research
When coral dies, their calcareous skeletons constitute coral rubble in conjunction with the cementing activity of coralline algae and bacteria, creating a secondary reef structure which takes from years to decades to form. Healthy coral reefs differ from coral—rubble dominated reefs in microbial taxonomic composition and metabolic functional roles. The metabolisms of healthy reefs are dominated by autotrophic pathways, where carbon and nitrogen fixation dominate, while the metabolism of rubble—dominated reefs predominate in degradation of organic matter. Nitrogen fixation is 3 orders of magnitude lower in rubble—dominated reefs than in healthy reefs. Coral—rubble harbors a vast diversity of microbes that …
Consensus Guidelines For Advancing Coral Holobiont Genome And Specimen Voucher Deposition, Christian R. Voolstra, Kate M. Quigley, Sarah W. Davies, John Everett Parkinson, Raquel S. Peixoto, Manuel Aranda, Andrew C. Baker, Adam R. Barno, Daniel J. Barshis, Francesca Benzoni, Victor Bonito, David G. Bourne, Carol Buitrago-López, Tom C.L. Bridge, Cheong Xin Chan, David J. Combosch, Jamie Craggs, Jörg C. Frommlet, Santiago Herrera, Andrea M. Quattrini, Till Röthig, James D. Reimer, Esther Rubio-Portillo, David J. Suggett, Helena Villela, Maren Ziegler, Michael Sweet
Consensus Guidelines For Advancing Coral Holobiont Genome And Specimen Voucher Deposition, Christian R. Voolstra, Kate M. Quigley, Sarah W. Davies, John Everett Parkinson, Raquel S. Peixoto, Manuel Aranda, Andrew C. Baker, Adam R. Barno, Daniel J. Barshis, Francesca Benzoni, Victor Bonito, David G. Bourne, Carol Buitrago-López, Tom C.L. Bridge, Cheong Xin Chan, David J. Combosch, Jamie Craggs, Jörg C. Frommlet, Santiago Herrera, Andrea M. Quattrini, Till Röthig, James D. Reimer, Esther Rubio-Portillo, David J. Suggett, Helena Villela, Maren Ziegler, Michael Sweet
Biological Sciences Faculty Publications
Coral research is being ushered into the genomic era. To fully capitalize on the potential discoveries from this genomic revolution, the rapidly increasing number of high-quality genomes requires effective pairing with rigorous taxonomic characterizations of specimens and the contextualization of their ecological relevance. However, to date there is no formal framework that genomicists, taxonomists, and coral scientists can collectively use to systematically acquire and link these data. Spurred by the recently announced “Coral symbiosis sensitivity to environmental change hub” under the “Aquatic Symbiosis Genomics Project” - a collaboration between the Wellcome Sanger Institute and the Gordon and Betty Moore Foundation …
Oldest Indo-Pacific Lionfish (Pterois Volitans/P. Miles) Recorded From The Northwestern Gulf Of Mexico, Raven D. Blakeway, Alexander Q. Fogg, Glenn A. Jones
Oldest Indo-Pacific Lionfish (Pterois Volitans/P. Miles) Recorded From The Northwestern Gulf Of Mexico, Raven D. Blakeway, Alexander Q. Fogg, Glenn A. Jones
Gulf and Caribbean Research
Indo-Pacific lionfish (Pterois volitans/miles) were first detected off the coast of Florida in the 1980s, with aquaria release being the most likely mechanism for introduction. Since then, lionfish have proliferated through the Western Atlantic Ocean, Caribbean Sea, and Gulf of Mexico (GOM). Here, we report the oldest lionfish aged on record in the Western Atlantic, removed from Flower Garden Banks National Marine Sanctuary (FGBNMS) in the GOM. In August 2018, a research expedition removed 745 lionfish from FGBNMS, of which a subset were retained for age and growth estimation. The oldest lionfish was a 10 y old male, …
Heat Stress During Larval Stages On Coral Survivorship For M. Capitata, Sarah Woo
Heat Stress During Larval Stages On Coral Survivorship For M. Capitata, Sarah Woo
Pitzer Senior Theses
Very little is known about how heat stress during larvae stages effect larvae survivorship, early coral recruit settlement, and later stage coral survivorship. We focused on determining how heat stress during larvae stages effected Montipora capitata survivorship over time. After thermally stressing larvae, we asked how many larvae survived the treatment, how the treatment affected settlement, how many larvae survived the heat treatment but did not settle, and later stage coral survivorship experienced residual effects from the heat stress treatment. We exposed coral larvae to ambient seawater temperatures at 30°C and heated seawater temperatures to 34°C for an hour and …
Not Too Hot, Not Too Cold, But Moderately Variable: The Influence Of Environmental Variability On Coral Thermal Tolerance, Courtney Nicole Klepac
Not Too Hot, Not Too Cold, But Moderately Variable: The Influence Of Environmental Variability On Coral Thermal Tolerance, Courtney Nicole Klepac
Biological Sciences Theses & Dissertations
Anthropogenic climate change is causing an increase in the frequency and severity of marine heat waves, resulting in declining health of coral reef ecosystems worldwide. Coral bleaching events – the breakdown in symbiosis between the coral host and their intracellular photosynthetic algae – are increasingly common in recent years and contribute to widespread losses in coral cover. However, bleaching and heat stress responses vary across spatial scales both within and among coral species. Coral populations native to highly variable environments can have greater bleaching resistance than corals from more stable habitats and corals transplanted into these variable reef sites can …
Differential Survival Of Nursery‐Reared Acropora Cervicornis Outplants Along The Florida Reef Tract, Robert Van Woesik, Raymond B. Banister, Erich Bartels, David S. Gilliam, Elizabeth A. Goergen, Caitlin Lustic, Kerry Maxwell, Amelia Moura, Erinn M. Muller, Stephanie Schopmeyer, R. Scott Winters, Diego Lirman
Differential Survival Of Nursery‐Reared Acropora Cervicornis Outplants Along The Florida Reef Tract, Robert Van Woesik, Raymond B. Banister, Erich Bartels, David S. Gilliam, Elizabeth A. Goergen, Caitlin Lustic, Kerry Maxwell, Amelia Moura, Erinn M. Muller, Stephanie Schopmeyer, R. Scott Winters, Diego Lirman
Marine & Environmental Sciences Faculty Articles
In recent decades, the Florida reef tract has lost over 95% of its coral cover. Although isolated coral assemblages persist, coral restoration programs are attempting to recover local coral populations. Listed as threatened under the Endangered Species Act, Acropora cervicornis is the most widely targeted coral species for restoration in Florida. Yet strategies are still maturing to enhance the survival of nursey‐reared outplants of A. cervicornis colonies on natural reefs. This study examined the survival of 22,634 A. cervicornis colonies raised in nurseries along the Florida reef tract and outplanted to six reef habitats in seven geographical subregions between 2012 …
Standardized Short-Term Acute Heat Stress Assays Resolve Historical Differences In Coral Thermotolerance Across Microhabitat Reef Sites, Christian R. Voolstra, Carol Buitrago-López, Gabriela Perna, Anny Cárdenas, Benjamin C. C. Hume, Nils Rädecker, Daniel J. Barshis
Standardized Short-Term Acute Heat Stress Assays Resolve Historical Differences In Coral Thermotolerance Across Microhabitat Reef Sites, Christian R. Voolstra, Carol Buitrago-López, Gabriela Perna, Anny Cárdenas, Benjamin C. C. Hume, Nils Rädecker, Daniel J. Barshis
Biological Sciences Faculty Publications
Coral bleaching is one of the main drivers of reef degradation. Most corals bleach and suffer mortality at just 1–2°C above their maximum monthly mean temperatures, but some species and genotypes resist or recover better than others. Here, we conducted a series of 18‐hr short‐term acute heat stress assays side‐by‐side with a 21‐day long‐term heat stress experiment to assess the ability of both approaches to resolve coral thermotolerance differences reflective of in situ reef temperature thresholds. Using a suite of physiological parameters (photosynthetic efficiency, coral whitening, chlorophyll a , host protein, algal symbiont counts, and algal type association), we assessed …
Gene Expression Of Endangered Coral (Orbicella Spp.) In Flower Garden Banks National Marine Sanctuary After Hurricane Harvey, Rachel M. Wright, Adrienne M.S. Correa, Lucinda A. Quigley, Lory Z. Santiago-Vázquez, Kathryn E.F. Shamberger, Sarah W. Davies
Gene Expression Of Endangered Coral (Orbicella Spp.) In Flower Garden Banks National Marine Sanctuary After Hurricane Harvey, Rachel M. Wright, Adrienne M.S. Correa, Lucinda A. Quigley, Lory Z. Santiago-Vázquez, Kathryn E.F. Shamberger, Sarah W. Davies
Biological Sciences: Faculty Publications
About 190 km south of the Texas–Louisiana border, the East and West Flower Garden Banks (FGB) have maintained > 50% coral cover with infrequent and minor incidents of disease or bleaching since monitoring began in the 1970s. However, a mortality event, affecting 5.6 ha (2.6% of the area) of the East FGB, occurred in late July 2016 and coincided with storm-generated freshwater runoff extending offshore and over the reef system. To capture the immediate effects of storm-driven freshwater runoff on coral and symbiont physiology, we leveraged the heavy rainfall associated with Hurricane Harvey in late August 2017 by sampling FGB corals …
Nitrous Oxide And Methane Dynamics In A Coral Reef Lagoon Driven By Pore Water Exchange: Insights From Automated High‐Frequency Observations, Chiara O'Reilly, Isaac R. Santos, Tyler Cyronak, Ashly Mcmahon, Damien T. Maher
Nitrous Oxide And Methane Dynamics In A Coral Reef Lagoon Driven By Pore Water Exchange: Insights From Automated High‐Frequency Observations, Chiara O'Reilly, Isaac R. Santos, Tyler Cyronak, Ashly Mcmahon, Damien T. Maher
Tyler Cyronak
Automated cavity ring down spectroscopy was used to make continuous measurements of dissolved methane, nitrous oxide, and carbon dioxide in a coral reef lagoon for 2 weeks (Heron Island, Great Barrier Reef). Radon (222Rn) was used to trace the influence of tidally driven pore water exchange on greenhouse gas dynamics. Clear tidal variation was observed for CH4, which correlated to 222Rn in lagoon waters. N2O correlated to 222Rn during the day only, which appears to be a response to coupled nitrification‐denitrification in oxic sediments, fueled by nitrate derived from bird guano. The lagoon was …
Permeable Coral Reef Sediment Dissolution Driven By Elevated Pco2 And Pore Water Advection, Tyler Cyronak, Isaac R. Santos, Bradley D. Eyre
Permeable Coral Reef Sediment Dissolution Driven By Elevated Pco2 And Pore Water Advection, Tyler Cyronak, Isaac R. Santos, Bradley D. Eyre
Tyler Cyronak
Ocean acidification (OA) is expected to drive the transition of coral reef ecosystems from net calcium carbonate (CaCO3) precipitating to net dissolving within the next century. Although permeable sediments represent the largest reservoir of CaCO3 in coral reefs, the dissolution of shallow CaCO3 sands under future pCO2 levels has not been measured under natural conditions. In situ, advective chamber incubations under elevated pCO2 (~800 µatm) shifted the sediments from net precipitating to net dissolving. Pore water advection more than doubled dissolution rates (1.10 g CaCO3 m−2 d−1) when compared to …
Drivers Of Pco2 Variability In Two Contrasting Coral Reef Lagoons: The Influence Of Submarine Groundwater Discharge, Tyler Cyronak, Isaac R. Santos, Dirk V. Erler, Damien T. Maher, Bradley D. Eyre
Drivers Of Pco2 Variability In Two Contrasting Coral Reef Lagoons: The Influence Of Submarine Groundwater Discharge, Tyler Cyronak, Isaac R. Santos, Dirk V. Erler, Damien T. Maher, Bradley D. Eyre
Tyler Cyronak
The impact of groundwater on pCO2 variability was assessed in two coral reef lagoons with distinct drivers of submarine groundwater discharge (SGD). Diel variability of pCO2 in the two ecosystems was explained by a combination of biological drivers and SGD inputs. In Rarotonga, a South Pacific volcanic island, 222Rn‐derived SGD was driven primarily by a steep terrestrial hydraulic gradient, and the water column was influenced by the high pCO2 (5501 µatm) of the fresh groundwater. In Heron Island, a Great Barrier Reef coral cay, SGD was dominated by seawater recirculation through the sediments …
Comparing Chemistry And Census-Based Estimates Of Net Ecosystem Calcification On A Rim Reef In Bermuda, Travis A. Courtney, Andreas J. Andersson, Nicholas R. Bates, Andrew R. Collins, Tyler Cyronak, Samantha J. De Putron, Bradley D. Eyre, Rebecca Garley, Eric J. Hochberg, Rodney Johnson, Sylvia Musielewicz, Tim J. Noyes, Christopher L. Sabine, Adrienne J. Sutton, Jessy Toncin, Aline Tribollet
Comparing Chemistry And Census-Based Estimates Of Net Ecosystem Calcification On A Rim Reef In Bermuda, Travis A. Courtney, Andreas J. Andersson, Nicholas R. Bates, Andrew R. Collins, Tyler Cyronak, Samantha J. De Putron, Bradley D. Eyre, Rebecca Garley, Eric J. Hochberg, Rodney Johnson, Sylvia Musielewicz, Tim J. Noyes, Christopher L. Sabine, Adrienne J. Sutton, Jessy Toncin, Aline Tribollet
Tyler Cyronak
Coral reef net ecosystem calcification (NEC) has decreased for many Caribbean reefs over recent decades primarily due to changes in benthic community composition. Chemistry-based approaches to calculate NEC utilize the drawdown of seawater total alkalinity (TA) combined with residence time to calculate an instantaneous measurement of NEC. Census-based approaches combine annual growth rates with benthic cover and reef structural complexity to estimate NEC occurring over annual timescales. Here, NEC was calculated for Hog Reef in Bermuda using both chemistry and census-based NEC techniques to compare the mass-balance generated by the two methods and identify the dominant biocalcifiers at Hog Reef. …
Multi-Trophic Species Interactions Shape Seascape-Scale Coral Reef Vegetation Patterns, Elizabeth M. P. Madin, Kristin Precoda, Alastair R. Harborne, Trisha B. Atwood, Chris M. Roelfsema, Osmar J. Luiz
Multi-Trophic Species Interactions Shape Seascape-Scale Coral Reef Vegetation Patterns, Elizabeth M. P. Madin, Kristin Precoda, Alastair R. Harborne, Trisha B. Atwood, Chris M. Roelfsema, Osmar J. Luiz
Ecology Center Publications
How species interactions shape habitat structure is a longstanding question in ecology. A curious phenomenon reflecting ecological self-organization around reef habitat structures exists on coral reefs: large-scale (hundreds to hundreds of thousands of m2) halo-like patterns surrounding patch reefs, i.e., individual coral reefs that are often separated by seagrass or macroalgal meadows. These “halos,” long known to occur in various locations worldwide, reflect a distinct band of unvegetated sediments surrounding coral patch reefs. However, the full suite of mechanisms controlling them have never been rigorously explored, perhaps due to the common assumption dating back nearly 50 years that they arise …
High-Resolution Habitat And Bathymetry Maps For 65,000 Sq. Km Of Earth’S Remotest Coral Reefs, Samuel J. Purkis, Arthur C. R. Gleason, Charlotte R. Purkis, Alexandra C. Dempsey, Philip Renaud, Mohamed Faisal, Steven Saul, Jeremy M. Kerr
High-Resolution Habitat And Bathymetry Maps For 65,000 Sq. Km Of Earth’S Remotest Coral Reefs, Samuel J. Purkis, Arthur C. R. Gleason, Charlotte R. Purkis, Alexandra C. Dempsey, Philip Renaud, Mohamed Faisal, Steven Saul, Jeremy M. Kerr
Marine & Environmental Sciences Faculty Articles
With compelling evidence that half the world’s coral reefs have been lost over the last four decades, there is urgent motivation to understand where reefs are located and their health. Without such basic baseline information, it is challenging to mount a response to the reef crisis on the global scale at which it is occurring. To combat this lack of baseline data, the Khaled bin Sultan Living Oceans Foundation embarked on a 10-yr survey of a broad selection of Earth’s remotest reef sites—the Global Reef Expedition. This paper focuses on one output of this expedition, which is meter-resolution seafloor habitat …
Cryptic Herbivorous Invertebrates Restructure The Composition Of Degraded Coral Reef Communities In The Florida Keys, Florida, Usa, Angelo Jason Spadaro
Cryptic Herbivorous Invertebrates Restructure The Composition Of Degraded Coral Reef Communities In The Florida Keys, Florida, Usa, Angelo Jason Spadaro
Biological Sciences Theses & Dissertations
Coral reefs have been on a trajectory of decline for nearly a century due to a variety of factors that have contributed to the shift in these communities away from dominance by reef-building corals, with commensurate changes on community composition and function. Florida’s reefs are a compelling example of a degraded system that has undergone a phase shift, and thus offered an excellent model system for my study of the effects of grazing by cryptic herbivores on community composition and their potential restoration value. I had four major objectives: (1) determine the suitability of Maguimithrax spinosissimus for manipulating grazing intensity …
Coral Reef Monitoring, Reef Assessment Technologies, And Ecosystem-Based Management, David O. Obura, Greta Aeby, Natchanon Amornthammarong, Ward Appeltans, Nicholas Bax, Joe Bishop, Russell E. Brainard, Samuel Chan, Pamela Fletcher, Timothy A. Gordon, Lew Gramer, Mishal Gudka, John Halas, James Hendee, Gregor Hodgson, Danwei Huang, Mike Jankulak, Albert Jones, Tadashi Kimura, Joshua Levy, Patricia Miloslavich, Loke Ming Chou, Frank Muller-Karger, Kennedy Osuka, Melita Samoilys, Stephen D. Simpson, Karenne Tun, Supin Wongbusarakum
Coral Reef Monitoring, Reef Assessment Technologies, And Ecosystem-Based Management, David O. Obura, Greta Aeby, Natchanon Amornthammarong, Ward Appeltans, Nicholas Bax, Joe Bishop, Russell E. Brainard, Samuel Chan, Pamela Fletcher, Timothy A. Gordon, Lew Gramer, Mishal Gudka, John Halas, James Hendee, Gregor Hodgson, Danwei Huang, Mike Jankulak, Albert Jones, Tadashi Kimura, Joshua Levy, Patricia Miloslavich, Loke Ming Chou, Frank Muller-Karger, Kennedy Osuka, Melita Samoilys, Stephen D. Simpson, Karenne Tun, Supin Wongbusarakum
Marine Science Faculty Publications
Coral reefs are exceptionally biodiverse and human dependence on their ecosystem services is high. Reefs experience significant direct and indirect anthropogenic pressures, and provide a sensitive indicator of coastal ocean health, climate change, and ocean acidification, with associated implications for society. Monitoring coral reef status and trends is essential to better inform science, management and policy, but the projected collapse of reef systems within a few decades makes the provision of accurate and actionable monitoring data urgent. The Global Coral Reef Monitoring Network has been the foundation for global reporting on coral reefs for two decades, and is entering into …
Larval Influx Of Diadema Antillarum To The Florida Keys Linked To Passage Of A Tortugas Eddy, Colette Feehan, William C. Sharp, Travis N. Miles, Michael S. Brown, Diane K. Adams
Larval Influx Of Diadema Antillarum To The Florida Keys Linked To Passage Of A Tortugas Eddy, Colette Feehan, William C. Sharp, Travis N. Miles, Michael S. Brown, Diane K. Adams
Department of Biology Faculty Scholarship and Creative Works
Lack of recovery of the sea urchin Diadema antillarum in the Caribbean region following a widespread epizootic in 1983–1984 has garnered great interest due to the role of this species as a grazer of macroalgae that exclude reef-building corals. In the Florida Keys, USA, previous research suggests that reestablishment of D. antillarum is limited by low fertilization success and a lack of larval supply. However, the physical mechanisms determining larval supply in the Florida Keys remain poorly resolved. Here, we use coupled biological and physical oceanographic datasets of D. antillarum larval supply to settlement collectors, sea surface temperatures and heights, …
Effects Of Thermal Stress On Amount, Composition, And Antibacterial Properties Of Coral Mucus, Rachel M. Wright, Marie E. Strader, Heather M. Genuise, Mikhail Matz
Effects Of Thermal Stress On Amount, Composition, And Antibacterial Properties Of Coral Mucus, Rachel M. Wright, Marie E. Strader, Heather M. Genuise, Mikhail Matz
Biological Sciences: Faculty Publications
Department of Ecology, Evolution, and Marine Biology, University of California, Santa Barbara, CA, United States of America ABSTRACT The surface mucus layer of reef-building corals supports feeding, sediment clearing, and protection from pathogenic invaders. As much as half of the fixed carbon supplied by the corals' photosynthetic symbionts is incorporated into expelled mucus. It is therefore reasonable to expect that coral bleaching (disruption of the coralfialgal symbiosis) would affect mucus production. Since coral mucus serves as an important nutrient source for the entire reef community, this could have substantial ecosystemwide consequences. In this study, we examined the effects of heat …
Detection Of Adsorbed Chlordecone On Microplastics In Marine Sediments In Guadeloupe: A Preliminary Study, Fidji Sandre, Charlotte R. Dromard, Karyn Le Menach, Yolande Bouchon-Navaro, Sébastien Cordonnier, Nathalie Tapie, Hélène Budzinski, Claude Bouchon
Detection Of Adsorbed Chlordecone On Microplastics In Marine Sediments In Guadeloupe: A Preliminary Study, Fidji Sandre, Charlotte R. Dromard, Karyn Le Menach, Yolande Bouchon-Navaro, Sébastien Cordonnier, Nathalie Tapie, Hélène Budzinski, Claude Bouchon
Gulf and Caribbean Research
Plastic pollution in the oceans is recognized as a worldwide problem. Since the 1950s, the production of plastics has been increasing and the first reports of microplastics (particles < 500 μm) in the marine environment began to appear in the 1970s. These particles represent a growing environmental problem due to their dispersion in seawater and marine organisms. Additionally, microparticles in general can adsorb pollutants that will then become bioavailable to organisms by being desorbed during digestion, which could be an important pathway for the contamination of organisms. In Guadeloupe and Martinique, an organochlorine pesticide called “chlordecone” was used from 1972 to 1993 in banana plantations and this very persistent pollutant contaminates soils, rivers, and coastal marine areas and accumulates in marine foodwebs. To examine these issues, we had two goals: 1) to assess the contamination of marine sediments by microplastics surrounding Guadeloupe; and 2) to determine the ability of microplastics to adsorb chlordecone, as has been demonstrated for other organochlorine pollutants. To do so, marine sediments were collected in triplicate from 12 sites in coral reef environments around the island. Microplastics from each sample were then enumerated by size, color and shape under a binocular microscope. The results indicate that microplastics are found in all the studied sites and that their distribution could be linked to marine currents or proximity to areas of significant human activities (port activities, agglomeration, etc.). Finally, our preliminary results indicated that chlordecone could be adsorbed onto microplastics, with a concentration ranging from 0.00036—0.00173 µg/µg of microfilter.
Effects Of Coral Reef Habitat Complexity On The Community Composition And Trophic Structure Of Marine Fish Assemblages In Indonesia’S Wakatobi Marine National Park, Kuyer Josiah Fazekas Jr.
Effects Of Coral Reef Habitat Complexity On The Community Composition And Trophic Structure Of Marine Fish Assemblages In Indonesia’S Wakatobi Marine National Park, Kuyer Josiah Fazekas Jr.
Browse all Theses and Dissertations
The coral reefs within Indonesia’s Wakatobi Marine National Park support a high diversity of reef-building hard corals and associated marine fish. Climate change threatens to dramatically affect coral reef ecosystems by altering the interactions between reef fish and the specific microhabitats they depend on for survival. To examine the spatially varied effects of habitat complexity on the community composition and trophic structure of marine fish assemblages, I analyzed fish community and habitat complexity data across reef zones. Habitat complexity metrics were: structural complexity, the percentage of hard coral (HC) cover, HC genera richness, HC genera diversity (Shannon index), and HC …
Trophic Plasticity In An Obligate Corallivorous Butterflyfish, David A. Feary, Andrew G. Bauman, James R. Guest, Andrew S. Hoey
Trophic Plasticity In An Obligate Corallivorous Butterflyfish, David A. Feary, Andrew G. Bauman, James R. Guest, Andrew S. Hoey
Marine & Environmental Sciences Faculty Articles
Changes in the abundance and/or taxonomic composition of corals are having direct impacts on the structure of reef fish assemblages, with those species that rely directly on live coral for food or shelter being most affected. Despite this, many specialist coral feeders persist on reefs where preferred coral taxa are rare. We examined feeding selectivity of the obligate corallivorous butterflyfish Chaetodon octofasciatus, a species known to feed predominantly on Acropora spp. corals, between a heavily urbanized coral reef system (Singapore) with low Acropora spp. cover, and a relatively intact reef system containing high Acropora spp. cover (Pulau Tioman, eastern …
Integrating Complementary Methods To Improve Diet Analysis In Fishery-Targeted Species, Jordan K. Matley, Gregory E. Maes, Floriaan Devloo-Delva, Roger Huerlimann, Gladys Chua, Andrew J. Tobin, Aaron T. Fisk, Colin A. Simpfendorfer, Michelle R. Heupel
Integrating Complementary Methods To Improve Diet Analysis In Fishery-Targeted Species, Jordan K. Matley, Gregory E. Maes, Floriaan Devloo-Delva, Roger Huerlimann, Gladys Chua, Andrew J. Tobin, Aaron T. Fisk, Colin A. Simpfendorfer, Michelle R. Heupel
Great Lakes Institute for Environmental Research Publications
Developing efficient, reliable, cost-effective ways to identify diet is required to understand trophic ecology in complex ecosystems and improve food web models. A combination of techniques, each varying in their ability to provide robust, spatially and temporally explicit information can be applied to clarify diet data for ecological research. This study applied an integrative analysis of a fishery-targeted species group—Plectropomus spp. in the central Great Barrier Reef, Australia, by comparing three diet-identification approaches. Visual stomach content analysis provided poor identification with ~14% of stomachs sampled resulting in identification to family or lower. A molecular approach was successful with prey from …
Environmental Controls On Depositional Patterns Of Isolated Carbonate Platforms, Jeremy M. Kerr
Environmental Controls On Depositional Patterns Of Isolated Carbonate Platforms, Jeremy M. Kerr
HCNSO Student Theses and Dissertations
This dissertation explores the influence of the environment on the lateral spatial patterning of facies in modern isolated carbonate platforms through six studies. The first study describes the creation of a database of benthic habitat and bathymetric maps derived from multispectral satellite imagery and the field data used calibrate and validate the mapping algorithms. The second study develops and assesses a new approach for remotely-deriving water depth from multispectral satellite imagery without the need for ground-truth information. The third study identifies a criterion for distinguishing between facies belts and mosaics and deploys the criterion to investigate the co-occurrence of these …
Modeling Coastal Vulnerability For Insight Into Mangrove And Coral Reef Conservation Efforts In Cuba, Maria Gomez
Modeling Coastal Vulnerability For Insight Into Mangrove And Coral Reef Conservation Efforts In Cuba, Maria Gomez
Theses and Dissertations
Cuba’s expansive coral reefs and mangrove habitats provide a variety of ecosystem services to coastal communities including nursery grounds for fisheries, shoreline stability, and storm and flood protection. While Cuba’s coastal habitats are some of the most preserved in the Caribbean, they are under increasing threat of degradation from the impacts of climate change, increased tourism, and coastal development. With the goal of sustainable development, Cubans need to assess the storm and flood protection benefits these coastal habitats provide, and integrate this information into future expansion and management plans within the National Protected Areas System (SNAP). Using the open source …
Foraging Ecology Of Parrotfishes In The Greater Caribbean: Impacts Of Specialization And Dietary Preferences On Marine Benthic Communities, Madelyn V. Roycroft
Foraging Ecology Of Parrotfishes In The Greater Caribbean: Impacts Of Specialization And Dietary Preferences On Marine Benthic Communities, Madelyn V. Roycroft
Master's Theses
Coral reefs are one of the world’s most diverse yet heavily impacted marine ecosystems. As a result of many direct and indirect stressors, coral reefs have experienced major degradation over the last several decades. Declines in coral reefs in the Caribbean have been particularly acute and generally associated with the loss of key herbivores and an increase in algae. Herbivorous fishes such as parrotfishes can positively impact coral reefs by removing algae that compete with corals for light and space. However, many parrotfishes are also important coral predators. Predation on corals, known as corallivory, can adversely affect coral growth, reproduction …