Life Sciences Commons^™

Editorial: Amaranthus: Naturally Stress-Resistant Resources For Improved Agriculture And Human Health, Volume Ii, Matthew W. Blair, Chance Riggins, Ana Paulina Barba De La Rosa

Agricultural and Environmental Sciences Faculty Research

No abstract provided.

Snp Discovery In Proso Millet (Panicum Miliaceum L.) Using Lowpass Genome Sequencing, Rituraj Khound, Guangchao Sun, Ravi V. Mural, James C. Schnable, Dipak K. Santra

Department of Agronomy and Horticulture: Faculty Publications

Domesticated ~10,000 years ago in northern China, Proso millet (Panicum miliaceum L.) is a climate-resilient and human health-promoting cereal crop. The genome size of this self-pollinated allotetraploid is 923 Mb. Proso millet seeds are an important part of the human diet in many countries. In the USA, its use is restricted to the birdseed and pet food market. Proso millet is witnessing gradual demand in the global human health and wellness food market owing to its health-promoting properties such as low glycemic index and gluten-free. The breeding efforts for developing improved proso millet cultivars are hindered by the …

Dct4—A New Member Of The Dicarboxylate Transporter Family In C4 Grasse, Sarit Weissmann, Pu Huang, Madeline A. Wiechert, Koki Furuyama, Thomas P. Brutnell, Mitsutaka Taniguchi, James C. Schnable, Todd C. Mockler

Center for Plant Science Innovation: Faculty and Staff Publications

Malate transport shuttles atmospheric carbon into the Calvin–Benson cycle during NADP-ME C4 photosynthesis. Previous characterizations of several plant dicarboxylate transporters (DCT) showed that they efficiently exchange malate across membranes. Here, we identify and characterize a previously unknown member of the DCT family, DCT4, in Sorghum bicolor. We show that SbDCT4 exchangesmalateacrossmembranesanditsexpressionpatternisconsistentwitharoleinmalatetransportduringC4 photosynthesis. SbDCT4 is not syntenic to the characterized photosynthetic gene ZmDCT2, and an ortholog is not detectable in the maize reference genome. We found that the expression patterns of DCT family genes in the leaves of Zea mays, and S. bicolor varied by cell type. Our results suggest that …

The Role Of Botanical Garden Of Pbai In Bydgoszcz In Promoting The Crop And Usage Of Perennial C4 Grasses In Poland, Włodzimierz Majtkowski, Gabriela Majtkowska, Bartosz Tomaszewski

IGC Proceedings (1997-2023)

Among the over 300 grass species known from Poland, there are about 160 species well established in the flora (~130 native with C3 photosynthesis pathway and ~30 aliens), and nearly 150 ephemerophytes, occasional escapers from cultivation or cultivated species (Mirek and Piękoś-Mirkowa 2002). Grasses from other climatic zones have been introduced to our country in recent years, especially as ornamental plants and as a source of biomass for energy purposes. The studies conducted since the 1990s in Botanical Garden of PBAI in Bydgoszcz, where the National Grass Collection is located, have contributed considerably to the popularization of C4 grasses in …

Isoseq Transcriptome Assembly Of C3 Panicoid Grasses Provides Tools To Study Evolutionary Change In The Panicoideae, Daniel S. Carvalho, Aime Nishimwe, James Schnable

Department of Agronomy and Horticulture: Faculty Publications

The number of plant species with genomic and transcriptomic data has been increasing rapidly. The grasses—Poaceae—have been well represented among species with published reference genomes. However, as a result the genomes of wild grasses are less frequently targeted by sequencing efforts. Sequence data from wild relatives of crop species in the grasses can aid the study of domestication, gene discovery for breeding and crop improvement, and improve our understanding of the evolution of C₄ photosynthesis. Here, we used long-read sequencing technology to characterize the transcriptomes of three C₃ panicoid grass species: Dichanthelium oligosanthes, Chasmanthium laxum, and …

Isoseq Transcriptome Assembly Of C3 Panicoid Grasses Provides Tools To Study Evolutionary Change In The Panicoideae, Daniel S. Carvalho, Aime V. Nishimwe, James C. Schnable

Center for Plant Science Innovation: Faculty and Staff Publications

The number of plant species with genomic and transcriptomic data has been increasing rapidly. The grasses—Poaceae—have been well represented among species with published reference genomes. However, as a result the genomes of wild grasses are less frequently targeted by sequencing efforts. Sequence data from wild relatives of crop species in the grasses can aid the study of domestication, gene discovery for breeding and crop improvement, and improve our understanding of the evolution of C₄ photosynthesis. Here, we used long-read sequencing technology to characterize the transcriptomes of three C₃ panicoid grass species: Dichanthelium oligosanthes, Chasmanthium laxum, and …

Cross Species Selection Scans Identify Components Of C4 Photosynthesis In The Grasses, Pu Huang, Anthony J. Studer, James C. Schnable, Elizabeth A. Kellogg, Thomas P. Brutnell

Department of Agronomy and Horticulture: Faculty Publications

C₄ photosynthesis is perhaps one of the best examples of convergent adaptive evolution with over 25 independent origins in the grasses (Poaceae) alone. The availability of high quality grass genome sequences presents new opportunities to explore the mechanisms underlying this complex trait using evolutionary biology-based approaches. In this study, we performed genome-wide cross-species selection scans in C₄ lineages to facilitate discovery of C₄ genes. The study was enabled by the well conserved collinearity of grass genomes and the recently sequenced genome of a C₃ panicoid grass, Dichanthelium oligosanthes. This method, in contrast to previous studies, …

Modeling Gross Primary Production Of Irrigated And Rain-Fed Maize Using Modis Imagery And Co2 Flux Tower Data, Joshua L. Kalfas, Xiangming Xiao, Diana X. Vanegas, Shashi B. Verma, Andrew E. Suyker

School of Natural Resources: Faculty Publications

Abstract

Information on gross primary production (GPP) of maize croplands is needed for assessing and monitoring maize crop conditions and the carbon cycle. A number of studies have used the eddy covariance technique to measure net ecosystem exchange (NEE) of CO₂ between maize cropland fields and the atmosphere and partitioned NEE data to estimate seasonal dynamics and interannual variation of GPP in maize fields having various crop rotation systems and different water management practices. How to scale up in situ observations from flux tower sites to regional and global scales is a challenging task. In this study, the Vegetation …

Evolutionary Physiology: The Extent Of C4 And Cam Photosynthesis In The Genera Anacampseros And Grahamia Of The Portulacaceae, Lonnie J. Guralnick, Amanda Cline, Monica Smith, Rowan F. Sage

Arts & Sciences Faculty Publications

The Portulacaceae is one of the few terrestrial plant families known to have both C(4) and Crassulacean acid metabolism (CAM) species. There may be multiple origins of the evolution of CAM within the Portulacaceae but the only clear evidence of C(4) photosynthesis is found in members of the genus Portulaca. In the Portulaca, CAM succulent tissue is overlaid with the C(4) tissue in a unique fashion where both pathways are operating simultaneously. Earlier reports have shown that the clade containing the genera Anacampseros and Grahamia may also contain C(4) photosynthetic species similar to the Portulaca, which would indicate multiple origins …

C3 Origins Of The C4 Pathway Regulatory Enzyme, Ppdk-Rp, C. J. Chastain, Gautam Sarath, Raymond Chollet

Gautam Sarath Publications

A current view of C₄ and CAM evolution holds that all of the constituent enzymes of the C₄ pathway preexisted in C₃ plants, albeit functioning in nonphotosynthetic capacities.