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Articles 1 - 23 of 23
Full-Text Articles in Life Sciences
Living Shoreline Stabilization To Increase Resiliency At De Soto National Memorial, Linda Walters, Melinda Donnelly, Christian Pilato, Suzanne Connor
Living Shoreline Stabilization To Increase Resiliency At De Soto National Memorial, Linda Walters, Melinda Donnelly, Christian Pilato, Suzanne Connor
CEELAB Research Data
De Soto National Memorial (Bradenton, FL) is an important location where both Native Americans and De Soto's army of soldiers once lived. We have been working closely with the National Park Service and the University of Central Florida to understand how to best stabilize this shoreline using living shoreline techniques combined with long-term natural recruitment. Stabilizing De Soto's shoreline is essential to decrease erosion and shoreline loss to protect the Park's cultural and natural resources, especially the numerous historically significant shell middens. Through pre-restoration monitoring, we determined that high-energy boat wakes were limiting natural mangrove recruitment. Lack of retention of …
Ray Et Al.: Pheromone Of The Velvet Longhorned Beetle Trichoferus Campestris, Ann M. Ray, Joseph A. Francese, Yunfan Zou, Kristopher Watson, Damon J. Crook, Jocelyn G. Millar
Ray Et Al.: Pheromone Of The Velvet Longhorned Beetle Trichoferus Campestris, Ann M. Ray, Joseph A. Francese, Yunfan Zou, Kristopher Watson, Damon J. Crook, Jocelyn G. Millar
Faculty Scholarship
No abstract provided.
Sedimentary Age Models, Benthic Foraminifera, Mass Accumulation Rates, And Volcanic Grain Data From R/V Justo Sierra Cruise In The Southern Gulf And Ixtoc I From 2015-08-03 To 2015-08-06, Patrick Schwing
C-IMAGE data
This dataset includes age models, benthic foraminifera species counts used for stable isotope analysis, mass accumulation rates and volcanic grain counts from 6 sediment cores collected throughout the southern Gulf of Mexico during the R/V Justo Sierra cruise in the Southern Gulf and Ixtoc I from 2015-08-03 to 2015-08-06. Samples were analyzed by gamma spectrometry with High-Purity Germanium (HPGe) gamma-ray detectors (Canberra Coaxial Planar configuration) for total 210Pb (46.5 keV), 214Pb (295 keV and 351 keV), and 214Bi (609 keV) activities. The mean activity of the 214Pb (295 keV), 214Pb (351 keV), and 214Bi (609 keV) was used as a …
Short-Lived Radioisotope Geochronology From Sediment Cores Collected During R/V Weatherbird Ii Cruises In The Northern Gulf Of Mexico From 2010-11-18 To 2016-09-09, Gregg R. Brooks, Rebekka A. Larson
Short-Lived Radioisotope Geochronology From Sediment Cores Collected During R/V Weatherbird Ii Cruises In The Northern Gulf Of Mexico From 2010-11-18 To 2016-09-09, Gregg R. Brooks, Rebekka A. Larson
C-IMAGE data
Short-lived Radioisotope (SLRad) data were generated for selected core sub-samples at 2mm sampling intervals for “surficial unit” and 5mm sampling resolution intervals to base of cores. SLRad data generated include sample activity as disintegrations per minute per gram (dpm/g) of: 1) Excess 234Th (234Thxs) activity, which is calculated by measuring the total 234Th (234ThTot) activity and the subtraction of the measured or estimated “Supported” 234Th (234ThSup) activity, 2) Excess 210Pb (210Pbxs) activity, which is calculated by measuring the total 210Pb (210PbTot) activity and subtraction of the measured background 210Pb (210PbSup) activity (average of 214Pb at 295keV, 214Pb at 351keV, and …
Sediment Texture And Composition Of Sediment Cores Collected During R/V Weatherbird Ii Cruises In The Northern Gulf Of Mexico From 2010-11-18 To 2016-09-09, Gregg R. Brooks, Rebekka A. Larson
Sediment Texture And Composition Of Sediment Cores Collected During R/V Weatherbird Ii Cruises In The Northern Gulf Of Mexico From 2010-11-18 To 2016-09-09, Gregg R. Brooks, Rebekka A. Larson
C-IMAGE data
Sediment texture and composition data were generated for selected core sub-samples at 2mm sampling intervals for “surficial unit” and 5mm sampling resolution intervals to base of cores. Sediment texture values are expressed as % Gravel, % Sand, % Silt and % Clay as calculated by dry weight (g). % Mud can be calculated by combining % Silt and % Clay. Sediment composition is expressed as % carbonate content measured by acid leaching. This dataset supports the publication: Larson, R. A., Brooks, G. R., Schwing, P. T., Holmes, C. W., Carter, S. R., & Hollander, D. J. (2018). High-resolution investigation of …
Short-Lived Radioisotope (Excess Pb210) Measurements From Sediment Cores Collected Throughout The Gulf Of Mexico From 2010-11-07 To 2017-07-20, Patrick Schwing, David Hollander
Short-Lived Radioisotope (Excess Pb210) Measurements From Sediment Cores Collected Throughout The Gulf Of Mexico From 2010-11-07 To 2017-07-20, Patrick Schwing, David Hollander
C-IMAGE data
This dataset includes baseline short-lived radioisotope measurements from sediment cores collected throughout the Gulf of Mexico. Samples were analyzed by gamma spectrometry with High-Purity Germanium (HPGe) gamma-ray detectors (Canberra Coaxial Planar configuration) for total 210Pb (46.5 keV), 214Pb (295 keV and 351 keV), and 214Bi (609 keV) activities. The mean activity of the 214Pb (295 keV), 214Pb (351 keV), and 214Bi (609 keV) was used as a proxy for 226Ra activity and therefore the supported 210Pb that is produced in situ. The reported excess 210Pb (210Pbxs) is the difference of the total 210Pb and the supported 210Pb.
Wageningen Aquaria/Microcosm Experiments, Benthic Foraminifera Assemblage And Stable Isotope Measurements, Patrick Schwing, David J. Hollander
Wageningen Aquaria/Microcosm Experiments, Benthic Foraminifera Assemblage And Stable Isotope Measurements, Patrick Schwing, David J. Hollander
C-IMAGE data
Dataset contains benthic foraminifera assemblage and stable isotope measurements. Stable isotope measurements are presented in δ13C and δ18O (‰). Diversity indices include Shannon, Fisher’s Alpha and evenness. Benthic foraminifera abundance is reported as individuals per unit mass (indiv./g).
Photoperiod Hippodamia Convergens, John J. Obrycki
Photoperiod Hippodamia Convergens, John J. Obrycki
Lady Beetle Research Data
Photoperiodic induction of adult diapause in North American populations of the lady beetle Hippodamia convergens
Hippodamia Variegata Development At Ld, John J. Obrycki
Hippodamia Variegata Development At Ld, John J. Obrycki
Lady Beetle Research Data
Reproductive diapause in North American populations of the introduced lady beetle Hippodamia variegata
Photoperiod Hippodamia Variegata, John J. Obrycki
Photoperiod Hippodamia Variegata, John J. Obrycki
Lady Beetle Research Data
Reproductive diapause in North American populations of the introduced lady beetle Hippodamia variegata
Hippodamia Variegata Sensitive Stage Pre-Oviposition Period, John J. Obrycki
Hippodamia Variegata Sensitive Stage Pre-Oviposition Period, John J. Obrycki
Lady Beetle Research Data
Reproductive diapause in North American populations of the introduced lady beetle Hippodamia variegata
Ichthyology Scientific Collection Spreadsheet, Karisa Boyer
Ichthyology Scientific Collection Spreadsheet, Karisa Boyer
Ichthyology Collection
No abstract provided.
Core Extrusion Bulk Density/Pore Water, Northern Gulf Of Mexico, November 2010 To September 2016, Rebekka A. Larson, Gregg R. Brooks
Core Extrusion Bulk Density/Pore Water, Northern Gulf Of Mexico, November 2010 To September 2016, Rebekka A. Larson, Gregg R. Brooks
C-IMAGE data
Measurement of sediment sample wet weight (g) and dry weight (g) for core sub-samples at 2mm sampling intervals for “surficial unit” and 5mm sampling resolution intervals to base of cores. Bulk density is the dry weight per sampling volume expressed as g/cm^3 and is utilized in the calculation of Mass Accumulation Rates (MAR’s). Samples were collected in the northern Gulf of Mexico from November 2010 to September 2016.
Manta 3-D Turning Data, Frank E. Fish
Trace Metals And Minor Elements In Southern Gulf Of Mexico Sediments Following The Ixtoc Marine Oil Blow Out Event, 2015, David W. Hastings, Thomas Bartlett
Trace Metals And Minor Elements In Southern Gulf Of Mexico Sediments Following The Ixtoc Marine Oil Blow Out Event, 2015, David W. Hastings, Thomas Bartlett
C-IMAGE data
Our objective is to compare the impact of two marine oil well blowouts on surface sediments in the Gulf of Mexico: the recent 2010 DWH blowout in the Northern Gulf with the Ixtoc blowout in 1979/80 in the Southern Gulf. A suite of trace and minor elements (V, Cr, Mn, Fe, Co, Ni, Cu, Sr, Cd, Mo, Ba, Re, and U) some of which are sensitive to changes in sedimentary redox conditions, was analyzed in bulk surface sediments; that data is presented here. Sediment cores were collected in the SE GoM on a research cruise on the R/V Justo Sierra …
Dna Sequences Of The Mitochondrial Cytochrome C Oxidase I (Coi) Genes From Deep Sea Fishes, Cruises Dp03 And Dp04 From May 2016 - August 2016, Max Weber, Kimberly A. Finnegan, Andrea Bernard, Ron Eytan, Mahmood S. Shivji
Dna Sequences Of The Mitochondrial Cytochrome C Oxidase I (Coi) Genes From Deep Sea Fishes, Cruises Dp03 And Dp04 From May 2016 - August 2016, Max Weber, Kimberly A. Finnegan, Andrea Bernard, Ron Eytan, Mahmood S. Shivji
DEEPEND Datasets
The deep sea ecosystem is believed to contain the highest biomass of fish in the oceans. However, the taxonomic diversity in this ecosystem is incompletely described and likely to be vastly underestimated. DNA sequence data (barcodes) have become a key tool to discover hidden biodiversity. We generated mitochondrial DNA barcode datasets based on the Cytochrome c oxidase I (COI) gene from deep sea fishes. These data were analyzed using phylogenetic and statistical methods to reveal cryptic species and make taxonomic linkages between adult fishes and their early life stages. These datasets were generated from fishes collected in the northern Gulf …
Mitochondrial And Nuclear Sequences For Phylogenetic Analysis Of Three Cephalopod Species, Northern Gulf Of Mexico, May 2015 To May 2017, Amanda Sosnowki
Mitochondrial And Nuclear Sequences For Phylogenetic Analysis Of Three Cephalopod Species, Northern Gulf Of Mexico, May 2015 To May 2017, Amanda Sosnowki
DEEPEND Datasets
The midwater column contains a wide diversity of cephalopods in the northern Gulf of Mexico. DNA sequence data (barcodes) have become a key tool to discover hidden biodiversity. We generated mitochondrial DNA barcode datasets based on the Cytochrome c oxidase I (COI), 16s, and 28s genes from cephalopods. These data were analyzed using phylogenetic methods to examine possible connectivity of 3 species (Vampyroteuthis infernalis, Pyroteuthis margaritifera, and Cranchia scabra) between two basins, the Gulf of Mexico and the area surrounding Bear Seamount in the northwestern Atlantic Ocean. These datasets were generated from cephalopods collected in the northern Gulf of Mexico …
Release From Intraspecific Competition Promotes Dominance Of A Non-Native Invader, Robert Warren
Release From Intraspecific Competition Promotes Dominance Of A Non-Native Invader, Robert Warren
Biology Faculty Datasets
Species can coexist through equalizing (similar fitness abilities) and stabilizing (unique niche requirements) mechanisms – assuming that intraspecific competition imposes more limitation than interspecific competition. Non-native species often de-stabilize coexistence, suggesting that they bring either a fitness advantage or a distinct niche requirement. We tested whether greater fitness or unique niche requirements best explained a successful North American invasion by the European Myrmica rubra ant. North American invaded-range M. rubra aggressively sting and occur in enormous numbers (suggesting a fitness advantage), yet our study site has a history of anthropogenic disturbance that might favor M. rubra (suggesting a unique niche). …
Interacting Effects Of Urbanization And Coastal Gradients On Ant Thermal Responses, Robert Warren
Interacting Effects Of Urbanization And Coastal Gradients On Ant Thermal Responses, Robert Warren
Biology Faculty Datasets
Urban-to-rural gradients intersect with other, often unmeasured, environmental gradients that may influence or even supersede species responses. Here we use coastal-to-interior and urban-rural gradients to investigate woodland ant response (physiological thermal tolerance, community structure and spring phenology) to two overlapping thermal gradients, the Great Lakes (Erie and Ontario) and the Buffalo, NY urban center (USA). Woodland ant physiological and behavioral responses, and community responses, shifted along the coastal-to-interior and urban-rural gradients, but they were generally best explained by lake effects (though urban ants tolerated higher temperatures than rural ants). The relatively colder spring temperatures in coastal areas (as compared to …
Tissue Expression Patterns Identify Mouse Cilia Genes, Timothy S. Mcclintock
Tissue Expression Patterns Identify Mouse Cilia Genes, Timothy S. Mcclintock
Physiology Research Data
A summary of 2,127 mouse genes linked to cilia by previous high-throughput approaches (reviewed in Inglis et al., 2006), published studies of individual gene products, or by McClintock et al. 2008. Each gene was viewed at Entrez Gene to verify and update the Gene ID and Gene Symbol. Each was also searched against PubMed (Gene Symbol AND (cili* OR flagel*)) for published evidence linking the mouse gene or putative orthologs to cilia or flagella. This searchable file lists identifying information about each gene, functional information about the encoded protein, the number of high-throughput studies linking the gene to cilia, and …
Dna Sequences Of Mitochondrial Cytochrome C Oxidase I (Coi) Genes From Deep Sea Fishes Collected During Deepend Cruise Dp05 From 2017-05-01 To 2017-05-11, Kimberly A. Finnegan, Andrea Bernard, M. Weber, Ron Eytan, Mahmood S. Shivji
Dna Sequences Of Mitochondrial Cytochrome C Oxidase I (Coi) Genes From Deep Sea Fishes Collected During Deepend Cruise Dp05 From 2017-05-01 To 2017-05-11, Kimberly A. Finnegan, Andrea Bernard, M. Weber, Ron Eytan, Mahmood S. Shivji
DEEPEND Datasets
Deep sea fishes were collected in the northern Gulf of Mexico during DEEPEND cruise DP05 from May 1 to 11, 2017. This dataset contains Genbank accession numbers of DNA sequences of the mitochondrial Cytochrome c oxidase I (COI) gene from fish species collected.
Comparison Of Porifera Bacterial Symbiont Community Profiles Based On Host Species And Source Template, Celeste Banfill, Jose Lopez
Comparison Of Porifera Bacterial Symbiont Community Profiles Based On Host Species And Source Template, Celeste Banfill, Jose Lopez
Lopez Laboratory: Genomics & Microbial Data
The present microbiome study reports a follow up microbiome characterization of the Porifera Tree of Life (PorToL) project, which has recognized the significance of understanding the evolutionary relationships among diverse sponge taxa (Redmond et al 2012; Thacker et al, 2013; and see http://Portol.org). The aim of this research is to opportunistically expand on the work of Hill et al. (2013) to provide preliminary data that 1) compares the diversity of bacterial communities across eight sponge taxa and 2) compares the differences between DNA and cDNA (RNA) generated 16S rRNA data to distinguish active vs. non-active bacteria.
Microorganisms Facilitate Uptake Of Dissolved Organic Nitrogen By Seagrass Leaves [Dataset], Flavia Tarquinio, Jeremy Bourgoure, Annette Koenders, Bonnie Laverock, Christin Säwström, Glenn A. Hyndes
Microorganisms Facilitate Uptake Of Dissolved Organic Nitrogen By Seagrass Leaves [Dataset], Flavia Tarquinio, Jeremy Bourgoure, Annette Koenders, Bonnie Laverock, Christin Säwström, Glenn A. Hyndes
Research Datasets
The database compiles data (used in Tarquinio et al. 2018, ISME Journal, accepted for publication) obtained from nitrogen stable isotope analysis (IRMS) and Nanoscale secondary ion mass spectrometry (NanoSIMS) of seagrass (Posidonia sinuosa) leaves and associated microorganisms. Row data (IRMS) are presented for bulk tissue 15N enrichment of P. sinuosa leaves at different times of incubation (plotted as bar chart in the manuscript), as well as the enrichment detected through the drawing of regions of interest (ROI) from NanoSIMS image analysis and plotted as box plots in the manuscript.